RNA–Protein interactions for RNA: ENST00000494333.1

RIF1-211, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 743 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-211ENST00000494333 KCNH1O95259 989 aa8.51□□□□□ -1.05
RIF1-211ENST00000494333 NFATC1O95644 943 aa8.51□□□□□ -1.05
RIF1-211ENST00000494333 OLFM2O95897 454 aa8.51□□□□□ -1.05
RIF1-211ENST00000494333 FAM200BP0CF97 657 aa8.51□□□□□ -1.05
RIF1-211ENST00000494333 IFNGR1P15260 489 aa8.51□□□□□ -1.05
RIF1-211ENST00000494333 DRD1P21728 446 aa8.51□□□□□ -1.05
RIF1-211ENST00000494333 HOXC13P31276 330 aa8.51□□□□□ -1.05
RIF1-211ENST00000494333 FNTBP49356 437 aa8.51□□□□□ -1.05
RIF1-211ENST00000494333 MXI1P50539 228 aa8.51□□□□□ -1.05
RIF1-211ENST00000494333 DMWDQ09019 674 aa8.51□□□□□ -1.05
RIF1-211ENST00000494333 STIM1Q13586 685 aa8.51□□□□□ -1.05
RIF1-211ENST00000494333 DPY19L1Q2PZI1 675 aa8.51□□□□□ -1.05
RIF1-211ENST00000494333 DCAF17Q5H9S7 520 aaPredicted RBP8.51□□□□□ -1.05
RIF1-211ENST00000494333 SNX30Q5VWJ9 437 aa8.51□□□□□ -1.05
RIF1-211ENST00000494333 PKN3Q6P5Z2 889 aa8.51□□□□□ -1.05
RIF1-211ENST00000494333 POMZP3Q6PJE2 187 aa8.51□□□□□ -1.05
RIF1-211ENST00000494333 CLEC20AQ6ZU45 233 aa8.51□□□□□ -1.05
RIF1-211ENST00000494333 FILIP1Q7Z7B0 1213 aa8.51□□□□□ -1.05
RIF1-211ENST00000494333 ELOA2Q8IYF1 753 aaPredicted RBP8.51□□□□□ -1.05
RIF1-211ENST00000494333 CD101Q93033 1021 aa8.51□□□□□ -1.05
RIF1-211ENST00000494333 JAKMIP2Q96AA8 810 aa8.51□□□□□ -1.05
RIF1-211ENST00000494333 MRGPRX3Q96LB0 322 aa8.51□□□□□ -1.05
RIF1-211ENST00000494333 DNAI2Q9GZS0 605 aa8.51□□□□□ -1.05
RIF1-211ENST00000494333 NACA2Q9H009 215 aa8.51□□□□□ -1.05
RIF1-211ENST00000494333 FBXO44Q9H4M3 255 aa8.51□□□□□ -1.05
RIF1-211ENST00000494333 CFAP97Q9P2B7 532 aa8.51□□□□□ -1.05
RIF1-211ENST00000494333 NCDNQ9UBB6 729 aa8.51□□□□□ -1.05
RIF1-211ENST00000494333 MAN1B1Q9UKM7 699 aa8.51□□□□□ -1.05
RIF1-211ENST00000494333 TICRRQ7Z2Z1 1910 aa8.5□□□□□ -1.05
RIF1-211ENST00000494333 PSMA7O14818 248 aa8.5□□□□□ -1.05
RIF1-211ENST00000494333 SLC16A3O15427 465 aaKnown RBP8.5□□□□□ -1.05
RIF1-211ENST00000494333 PAPSS2O95340 614 aaPredicted RBP8.5□□□□□ -1.05
RIF1-211ENST00000494333 ZDHHC11BP0C7U3 371 aa8.5□□□□□ -1.05
RIF1-211ENST00000494333 ENDOUP21128 410 aaKnown RBP8.5□□□□□ -1.05
RIF1-211ENST00000494333 ACO1P21399 889 aaKnown RBP8.5□□□□□ -1.05
RIF1-211ENST00000494333 PXNP49023 591 aaPredicted RBP8.5□□□□□ -1.05
RIF1-211ENST00000494333 PGFP49763 221 aa8.5□□□□□ -1.05
RIF1-211ENST00000494333 LRRC63Q05C16 580 aa8.5□□□□□ -1.05
RIF1-211ENST00000494333 DHCR24Q15392 516 aa8.5□□□□□ -1.05
RIF1-211ENST00000494333 LPAL2Q16609 132 aa8.5□□□□□ -1.05
RIF1-211ENST00000494333 FBXO43Q4G163 708 aa8.5□□□□□ -1.05
RIF1-211ENST00000494333 CBWD6Q4V339 395 aa8.5□□□□□ -1.05
RIF1-211ENST00000494333 CBWD3Q5JTY5 395 aa8.5□□□□□ -1.05
RIF1-211ENST00000494333 CBWD5Q5RIA9 395 aa8.5□□□□□ -1.05
RIF1-211ENST00000494333 KLHL10Q6JEL2 608 aa8.5□□□□□ -1.05
RIF1-211ENST00000494333 RHBDF2Q6PJF5 856 aa8.5□□□□□ -1.05
RIF1-211ENST00000494333 PRR23BQ6ZRT6 265 aa8.5□□□□□ -1.05
RIF1-211ENST00000494333 ATG4DQ86TL0 474 aaPredicted RBP8.5□□□□□ -1.05
RIF1-211ENST00000494333 LONP2Q86WA8 852 aa8.5□□□□□ -1.05
RIF1-211ENST00000494333 DDX42Q86XP3 938 aaKnown RBP eCLIP8.5□□□□□ -1.05
RIF1-211ENST00000494333 TRIM59Q8IWR1 403 aa8.5□□□□□ -1.05
RIF1-211ENST00000494333 KIAA1958Q8N8K9 716 aa8.5□□□□□ -1.05
RIF1-211ENST00000494333 SECISBP2LQ93073 1101 aaKnown RBP8.5□□□□□ -1.05
RIF1-211ENST00000494333 TMEM176AQ96HP8 235 aa8.5□□□□□ -1.05
RIF1-211ENST00000494333 DHTKD1Q96HY7 919 aaPredicted RBP8.5□□□□□ -1.05
RIF1-211ENST00000494333 FAXDC2Q96IV6 333 aa8.5□□□□□ -1.05
RIF1-211ENST00000494333 MAP6Q96JE9 813 aa8.5□□□□□ -1.05
RIF1-211ENST00000494333 FCRL2Q96LA5 508 aaPredicted RBP8.5□□□□□ -1.05
RIF1-211ENST00000494333 DUSP16Q9BY84 665 aa8.5□□□□□ -1.05
RIF1-211ENST00000494333 EPC1Q9H2F5 836 aa8.5□□□□□ -1.05
RIF1-211ENST00000494333 TLR8Q9NR97 1041 aaKnown RBP8.5□□□□□ -1.05
RIF1-211ENST00000494333 CISHQ9NSE2 258 aa8.5□□□□□ -1.05
RIF1-211ENST00000494333 ERVK13-1Q9NX77 482 aa8.5□□□□□ -1.05
RIF1-211ENST00000494333 TBC1D14Q9P2M4 693 aa8.5□□□□□ -1.05
RIF1-211ENST00000494333 ARMCX3Q9UH62 379 aaPredicted RBP8.5□□□□□ -1.05
RIF1-211ENST00000494333 RAB23Q9ULC3 237 aa8.5□□□□□ -1.05
RIF1-211ENST00000494333 SMG5Q9UPR3 1016 aaKnown RBP8.5□□□□□ -1.05
RIF1-211ENST00000494333 SLC8A2Q9UPR5 921 aa8.5□□□□□ -1.05
RIF1-211ENST00000494333 GPR55Q9Y2T6 319 aaPredicted RBP8.5□□□□□ -1.05
RIF1-211ENST00000494333 SH3BP1Q9Y3L3 701 aa8.5□□□□□ -1.05
RIF1-211ENST00000494333 COL4A2P08572 1712 aa8.49□□□□□ -1.05
RIF1-211ENST00000494333 E2F8A0AVK6 867 aa8.49□□□□□ -1.05
RIF1-211ENST00000494333 HHLA1C9JL84 531 aa8.49□□□□□ -1.05
RIF1-211ENST00000494333 BIN1O00499 593 aa8.49□□□□□ -1.05
RIF1-211ENST00000494333 AURKAO14965 403 aa8.49□□□□□ -1.05
RIF1-211ENST00000494333 PDPK1O15530 556 aa8.49□□□□□ -1.05
RIF1-211ENST00000494333 TBX1O43435 398 aa8.49□□□□□ -1.05
RIF1-211ENST00000494333 TLR5O60602 858 aa8.49□□□□□ -1.05
RIF1-211ENST00000494333 TBX18O95935 607 aa8.49□□□□□ -1.05
RIF1-211ENST00000494333 CYP17A1P05093 508 aa8.49□□□□□ -1.05
RIF1-211ENST00000494333 HOXA6P31267 233 aa8.49□□□□□ -1.05
RIF1-211ENST00000494333 CNR2P34972 360 aa8.49□□□□□ -1.05
RIF1-211ENST00000494333 ATP5C1P36542 298 aaKnown RBP8.49□□□□□ -1.05
RIF1-211ENST00000494333 PPP1R2P41236 205 aa8.49□□□□□ -1.05
RIF1-211ENST00000494333 ID4P47928 161 aa8.49□□□□□ -1.05
RIF1-211ENST00000494333 SLC6A11P48066 632 aa8.49□□□□□ -1.05
RIF1-211ENST00000494333 TUBP50607 506 aa8.49□□□□□ -1.05
RIF1-211ENST00000494333 RAD23BP54727 409 aa8.49□□□□□ -1.05
RIF1-211ENST00000494333 LRMPQ12912 555 aa8.49□□□□□ -1.05
RIF1-211ENST00000494333 SRSF5Q13243 272 aaKnown RBP8.49□□□□□ -1.05
RIF1-211ENST00000494333 SIM2Q14190 667 aaPredicted RBP8.49□□□□□ -1.05
RIF1-211ENST00000494333 GPRIN1Q7Z2K8 1008 aa8.49□□□□□ -1.05
RIF1-211ENST00000494333 ZNF227Q86WZ6 799 aa8.49□□□□□ -1.05
RIF1-211ENST00000494333 ZC3H3Q8IXZ2 948 aaKnown RBP8.49□□□□□ -1.05
RIF1-211ENST00000494333 TTC39CQ8N584 583 aa8.49□□□□□ -1.05
RIF1-211ENST00000494333 SLC4A11Q8NBS3 891 aa8.49□□□□□ -1.05
RIF1-211ENST00000494333 RPLP0P6Q8NHW5 317 aa8.49□□□□□ -1.05
RIF1-211ENST00000494333 SLC35C1Q96A29 364 aa8.49□□□□□ -1.05
RIF1-211ENST00000494333 METTL14Q9HCE5 456 aaKnown RBP8.49□□□□□ -1.05
RIF1-211ENST00000494333 POLR3BQ9NW08 1133 aaPredicted RBP8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms