RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 DCXO43602 365 aa19.48■□□□□ 0.71
COL27A1-207ENST00000494090 PQBP1O60828 265 aaKnown RBP19.48■□□□□ 0.71
COL27A1-207ENST00000494090 LTFP02788 710 aa19.48■□□□□ 0.71
COL27A1-207ENST00000494090 GSTM1P09488 218 aa19.48■□□□□ 0.71
COL27A1-207ENST00000494090 VAC14Q08AM6 782 aa19.48■□□□□ 0.71
COL27A1-207ENST00000494090 C16orf72Q14CZ0 275 aa19.48■□□□□ 0.71
COL27A1-207ENST00000494090 ARPINQ7Z6K5 226 aa19.48■□□□□ 0.71
COL27A1-207ENST00000494090 VSIG10LQ86VR7 867 aa19.48■□□□□ 0.71
COL27A1-207ENST00000494090 LGI2Q8N0V4 545 aa19.48■□□□□ 0.71
COL27A1-207ENST00000494090 MIER2Q8N344 545 aa19.48■□□□□ 0.71
COL27A1-207ENST00000494090 SNRNP27Q8WVK2 155 aaKnown RBP19.48■□□□□ 0.71
COL27A1-207ENST00000494090 MID1IP1Q9NPA3 183 aa19.48■□□□□ 0.71
COL27A1-207ENST00000494090 ITGAVP06756 1048 aa19.47■□□□□ 0.71
COL27A1-207ENST00000494090 ZNF143P52747 638 aaPredicted RBP19.47■□□□□ 0.71
COL27A1-207ENST00000494090 IRF2BP2Q7Z5L9 587 aa19.47■□□□□ 0.71
COL27A1-207ENST00000494090 C11orf74Q86VG3 221 aa19.47■□□□□ 0.71
COL27A1-207ENST00000494090 PHF13Q86YI8 300 aaPredicted RBP19.47■□□□□ 0.71
COL27A1-207ENST00000494090 SLC25A23Q9BV35 468 aa19.47■□□□□ 0.71
COL27A1-207ENST00000494090 WDR18Q9BV38 432 aa19.47■□□□□ 0.71
COL27A1-207ENST00000494090 FAM198AQ9UFP1 575 aa19.47■□□□□ 0.71
COL27A1-207ENST00000494090 DDNO94850 711 aaPredicted RBP19.47■□□□□ 0.71
COL27A1-207ENST00000494090 PSMG1O95456 288 aa19.47■□□□□ 0.71
COL27A1-207ENST00000494090 ETS1P14921 441 aa19.47■□□□□ 0.71
COL27A1-207ENST00000494090 ZNF398Q8TD17 642 aa19.47■□□□□ 0.71
COL27A1-207ENST00000494090 RMND5BQ96G75 393 aaPredicted RBP19.47■□□□□ 0.71
COL27A1-207ENST00000494090 GUCY1B2O75343 617 aa19.47■□□□□ 0.71
COL27A1-207ENST00000494090 ARMC12Q5T9G4 340 aa19.47■□□□□ 0.71
COL27A1-207ENST00000494090 CDRT15Q96T59 188 aa19.47■□□□□ 0.71
COL27A1-207ENST00000494090 RHBDL2Q9NX52 303 aa19.47■□□□□ 0.71
COL27A1-207ENST00000494090 SMIM22K7EJ46 135 aa19.47■□□□□ 0.71
COL27A1-207ENST00000494090 DLGAP3O95886 979 aa19.47■□□□□ 0.71
COL27A1-207ENST00000494090 FYNP06241 537 aa19.47■□□□□ 0.71
COL27A1-207ENST00000494090 CNPP09543 421 aaKnown RBP19.47■□□□□ 0.71
COL27A1-207ENST00000494090 RPL14P50914 215 aaKnown RBP19.47■□□□□ 0.71
COL27A1-207ENST00000494090 PSMD7P51665 324 aa19.47■□□□□ 0.71
COL27A1-207ENST00000494090 CNTN2Q02246 1040 aa19.47■□□□□ 0.71
COL27A1-207ENST00000494090 ANGPT1Q15389 498 aa19.47■□□□□ 0.71
COL27A1-207ENST00000494090 TRIM71Q2Q1W2 868 aaKnown RBP19.47■□□□□ 0.71
COL27A1-207ENST00000494090 GLT6D1Q7Z4J2 308 aa19.47■□□□□ 0.71
COL27A1-207ENST00000494090 ATG16L2Q8NAA4 619 aa19.47■□□□□ 0.71
COL27A1-207ENST00000494090 A0A0A0MRY4 1105 aa19.46■□□□□ 0.71
COL27A1-207ENST00000494090 SMNDC1O75940 238 aaKnown RBP eCLIP19.46■□□□□ 0.719e-7■□□□□ 10.4
COL27A1-207ENST00000494090 UNC5CO95185 931 aa19.46■□□□□ 0.71
COL27A1-207ENST00000494090 WEE1P30291 646 aa19.46■□□□□ 0.71
COL27A1-207ENST00000494090 GRK4P32298 578 aa19.46■□□□□ 0.71
COL27A1-207ENST00000494090 MARSP56192 900 aaKnown RBP19.46■□□□□ 0.71
COL27A1-207ENST00000494090 SAMD4BQ5PRF9 694 aaKnown RBP19.46■□□□□ 0.71
COL27A1-207ENST00000494090 CCDC149Q6ZUS6 474 aa19.46■□□□□ 0.71
COL27A1-207ENST00000494090 FGD2Q7Z6J4 655 aa19.46■□□□□ 0.71
COL27A1-207ENST00000494090 TFAP2DQ7Z6R9 452 aa19.46■□□□□ 0.71
COL27A1-207ENST00000494090 CCDC103Q8IW40 242 aa19.46■□□□□ 0.71
COL27A1-207ENST00000494090 SPATA13Q96N96 652 aa19.46■□□□□ 0.71
COL27A1-207ENST00000494090 MAPRE3Q9UPY8 281 aa19.46■□□□□ 0.71
COL27A1-207ENST00000494090 MTA2O94776 668 aa19.46■□□□□ 0.71
COL27A1-207ENST00000494090 GLRA2P23416 452 aa19.46■□□□□ 0.71
COL27A1-207ENST00000494090 MAPK8P45983 427 aa19.46■□□□□ 0.71
COL27A1-207ENST00000494090 GNA13Q14344 377 aa19.46■□□□□ 0.71
COL27A1-207ENST00000494090 CEP78Q5JTW2 689 aa19.46■□□□□ 0.71
COL27A1-207ENST00000494090 LPCAT2Q7L5N7 544 aa19.46■□□□□ 0.71
COL27A1-207ENST00000494090 RIOX2Q8IUF8 465 aa19.46■□□□□ 0.71
COL27A1-207ENST00000494090 QRFPRQ96P65 431 aa19.46■□□□□ 0.71
COL27A1-207ENST00000494090 POLR1EQ9GZS1 481 aaKnown RBP19.46■□□□□ 0.71
COL27A1-207ENST00000494090 ACP6Q9NPH0 428 aa19.46■□□□□ 0.71
COL27A1-207ENST00000494090 PCDHA11Q9Y5I1 949 aa19.46■□□□□ 0.71
COL27A1-207ENST00000494090 A0A0B4J269 797 aa19.46■□□□□ 0.71
COL27A1-207ENST00000494090 TPP1O14773 563 aa19.46■□□□□ 0.71
COL27A1-207ENST00000494090 CCDC130P13994 396 aa19.46■□□□□ 0.71
COL27A1-207ENST00000494090 TNNI3P19429 210 aa19.46■□□□□ 0.71
COL27A1-207ENST00000494090 CSGALNACT1Q8TDX6 532 aa19.46■□□□□ 0.71
COL27A1-207ENST00000494090 PPP1R16AQ96I34 528 aa19.46■□□□□ 0.71
COL27A1-207ENST00000494090 ZNF184Q99676 751 aaPredicted RBP19.46■□□□□ 0.71
COL27A1-207ENST00000494090 POMKQ9H5K3 350 aa19.46■□□□□ 0.71
COL27A1-207ENST00000494090 RNPEPL1Q9HAU8 725 aa19.46■□□□□ 0.71
COL27A1-207ENST00000494090 TMCO1Q9UM00 188 aa19.46■□□□□ 0.71
COL27A1-207ENST00000494090 NRCAMQ92823 1304 aa19.46■□□□□ 0.71
COL27A1-207ENST00000494090 TRUB2O95900 331 aaKnown RBP19.46■□□□□ 0.71
COL27A1-207ENST00000494090 POU1F1P28069 291 aa19.46■□□□□ 0.71
COL27A1-207ENST00000494090 SERPINA4P29622 427 aa19.46■□□□□ 0.71
COL27A1-207ENST00000494090 CYP2A13Q16696 494 aa19.46■□□□□ 0.71
COL27A1-207ENST00000494090 PSTKQ8IV42 348 aaKnown RBP19.46■□□□□ 0.71
COL27A1-207ENST00000494090 AKT1S1Q96B36 256 aa19.46■□□□□ 0.71
COL27A1-207ENST00000494090 DEPDC7Q96QD5 511 aa19.46■□□□□ 0.71
COL27A1-207ENST00000494090 FSCN2O14926 492 aa19.45■□□□□ 0.7
COL27A1-207ENST00000494090 LDLRP01130 860 aa19.45■□□□□ 0.7
COL27A1-207ENST00000494090 PROCP04070 461 aa19.45■□□□□ 0.7
COL27A1-207ENST00000494090 NOS2P35228 1153 aa19.45■□□□□ 0.7
COL27A1-207ENST00000494090 NAA20P61599 178 aa19.45■□□□□ 0.7
COL27A1-207ENST00000494090 HLA-DQA1Q5Y7H0 255 aa19.45■□□□□ 0.7
COL27A1-207ENST00000494090 INPP4AQ96PE3 977 aaPredicted RBP19.45■□□□□ 0.7
COL27A1-207ENST00000494090 CDHR5Q9HBB8 845 aa19.45■□□□□ 0.7
COL27A1-207ENST00000494090 TSC22D4Q9Y3Q8 395 aa19.45■□□□□ 0.7
COL27A1-207ENST00000494090 ROBO3Q96MS0 1386 aa19.45■□□□□ 0.7
COL27A1-207ENST00000494090 KRT75O95678 551 aa19.45■□□□□ 0.7
COL27A1-207ENST00000494090 LGALS2P05162 132 aa19.45■□□□□ 0.7
COL27A1-207ENST00000494090 RPL22P35268 128 aaKnown RBP19.45■□□□□ 0.7
COL27A1-207ENST00000494090 HYIQ5T013 277 aa19.45■□□□□ 0.7
COL27A1-207ENST00000494090 PRCCQ92733 491 aaPredicted RBP19.45■□□□□ 0.7
COL27A1-207ENST00000494090 DLG3Q92796 817 aa19.45■□□□□ 0.7
COL27A1-207ENST00000494090 SEPHS2Q99611 448 aa19.45■□□□□ 0.7
COL27A1-207ENST00000494090 IL22Q9GZX6 179 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms