RNA–Protein interactions for RNA: ENST00000494012.1

MACF1-222, Transcript of microtubule-actin crosslinking factor 1, human

TSL 4

Gene MACF1, Length 667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MACF1-222	ENST00000494012	CYB5D2	Q8WUJ1	264 aa		10.25	□□□□□ -0.77
MACF1-222	ENST00000494012	MAGEH1	Q9H213	219 aa		10.25	□□□□□ -0.77
MACF1-222	ENST00000494012	TMEM245	Q9H330	911 aa		10.25	□□□□□ -0.77
MACF1-222	ENST00000494012	GPATCH2L	Q9NWQ4	482 aa		10.25	□□□□□ -0.77
MACF1-222	ENST00000494012	BCCIP	Q9P287	314 aa	Known RBP eCLIP	10.25	□□□□□ -0.77
MACF1-222	ENST00000494012	ZNF212	Q9UDV6	495 aa		10.25	□□□□□ -0.77
MACF1-222	ENST00000494012	ERVW-1	Q9UQF0	538 aa		10.25	□□□□□ -0.77
MACF1-222	ENST00000494012	OR51B4	Q9Y5P0	310 aa		10.25	□□□□□ -0.77
MACF1-222	ENST00000494012	CXorf51A	A0A1B0GTR3	108 aa		10.24	□□□□□ -0.77
MACF1-222	ENST00000494012		A0A1W2PQF6	199 aa		10.24	□□□□□ -0.77
MACF1-222	ENST00000494012	ANTXRL	A6NF34	631 aa		10.24	□□□□□ -0.77
MACF1-222	ENST00000494012	TMEM110-MUSTN1	A8MSY1	372 aa		10.24	□□□□□ -0.77
MACF1-222	ENST00000494012	WASH4P	A8MWX3	477 aa		10.24	□□□□□ -0.77
MACF1-222	ENST00000494012	AXIN1	O15169	862 aa		10.24	□□□□□ -0.77
MACF1-222	ENST00000494012	RARA	P10276	462 aa		10.24	□□□□□ -0.77
MACF1-222	ENST00000494012	PRKCH	P24723	683 aa		10.24	□□□□□ -0.77
MACF1-222	ENST00000494012	IL1R2	P27930	398 aa		10.24	□□□□□ -0.77
MACF1-222	ENST00000494012	SLC1A1	P43005	524 aa		10.24	□□□□□ -0.77
MACF1-222	ENST00000494012	NOP2	P46087	812 aa	Known RBP	10.24	□□□□□ -0.77
MACF1-222	ENST00000494012	FNTB	P49356	437 aa		10.24	□□□□□ -0.77
MACF1-222	ENST00000494012	VASP	P50552	380 aa	Predicted RBP	10.24	□□□□□ -0.77
MACF1-222	ENST00000494012	GEMIN4	P57678	1058 aa	Known RBP	10.24	□□□□□ -0.77
MACF1-222	ENST00000494012	YBEY	P58557	167 aa	Predicted RBP	10.24	□□□□□ -0.77
MACF1-222	ENST00000494012	NHLH1	Q02575	133 aa		10.24	□□□□□ -0.77
MACF1-222	ENST00000494012	KRT81	Q14533	505 aa		10.24	□□□□□ -0.77
MACF1-222	ENST00000494012	MESD	Q14696	234 aa		10.24	□□□□□ -0.77
MACF1-222	ENST00000494012	POLD3	Q15054	466 aa	Predicted RBP	10.24	□□□□□ -0.77
MACF1-222	ENST00000494012	SMTNL2	Q2TAL5	461 aa		10.24	□□□□□ -0.77
MACF1-222	ENST00000494012	PARP15	Q460N3	678 aa		10.24	□□□□□ -0.77
MACF1-222	ENST00000494012	KCNT1	Q5JUK3	1230 aa		10.24	□□□□□ -0.77
MACF1-222	ENST00000494012	ARTN	Q5T4W7	220 aa		10.24	□□□□□ -0.77
MACF1-222	ENST00000494012	HEATR6	Q6AI08	1181 aa	Known RBP	10.24	□□□□□ -0.77
MACF1-222	ENST00000494012	RETSAT	Q6NUM9	610 aa		10.24	□□□□□ -0.77
MACF1-222	ENST00000494012	TMEM92	Q6UXU6	159 aa		10.24	□□□□□ -0.77
MACF1-222	ENST00000494012	RFX8	Q6ZV50	586 aa		10.24	□□□□□ -0.77
MACF1-222	ENST00000494012	POLN	Q7Z5Q5	900 aa		10.24	□□□□□ -0.77
MACF1-222	ENST00000494012	KIAA1328	Q86T90	577 aa		10.24	□□□□□ -0.77
MACF1-222	ENST00000494012	WDR5B	Q86VZ2	330 aa		10.24	□□□□□ -0.77
MACF1-222	ENST00000494012	RASSF3	Q86WH2	238 aa		10.24	□□□□□ -0.77
MACF1-222	ENST00000494012	PGBD3	Q8N328	593 aa		10.24	□□□□□ -0.77
MACF1-222	ENST00000494012	MDGA1	Q8NFP4	955 aa		10.24	□□□□□ -0.77
MACF1-222	ENST00000494012	OR52K2	Q8NGK3	314 aa		10.24	□□□□□ -0.77
MACF1-222	ENST00000494012	HMGB4	Q8WW32	186 aa		10.24	□□□□□ -0.77
MACF1-222	ENST00000494012	HSPH1	Q92598	858 aa		10.24	□□□□□ -0.77
MACF1-222	ENST00000494012	ALG14	Q96F25	216 aa		10.24	□□□□□ -0.77
MACF1-222	ENST00000494012	KCTD15	Q96SI1	283 aa	Predicted RBP	10.24	□□□□□ -0.77
MACF1-222	ENST00000494012	ATP13A1	Q9HD20	1204 aa		10.24	□□□□□ -0.77
MACF1-222	ENST00000494012	POLR3B	Q9NW08	1133 aa	Predicted RBP	10.24	□□□□□ -0.77
MACF1-222	ENST00000494012	RCOR3	Q9P2K3	495 aa	Predicted RBP	10.24	□□□□□ -0.77
MACF1-222	ENST00000494012	SUN2	Q9UH99	717 aa		10.24	□□□□□ -0.77
MACF1-222	ENST00000494012	DNAI1	Q9UI46	699 aa		10.24	□□□□□ -0.77
MACF1-222	ENST00000494012	HPCAL4	Q9UM19	191 aa		10.24	□□□□□ -0.77
MACF1-222	ENST00000494012	HS3ST2	Q9Y278	367 aa		10.24	□□□□□ -0.77
MACF1-222	ENST00000494012		A0A0D9SEW6	157 aa		10.23	□□□□□ -0.77
MACF1-222	ENST00000494012	EDDM13	A0A1B0GTR0	161 aa		10.23	□□□□□ -0.77
MACF1-222	ENST00000494012	BTNL10	A8MVZ5	291 aa		10.23	□□□□□ -0.77
MACF1-222	ENST00000494012	WASH3P	C4AMC7	463 aa		10.23	□□□□□ -0.77
MACF1-222	ENST00000494012	CBX4	O00257	560 aa		10.23	□□□□□ -0.77
MACF1-222	ENST00000494012	ARHGAP6	O43182	974 aa		10.23	□□□□□ -0.77
MACF1-222	ENST00000494012	SPOP	O43791	374 aa		10.23	□□□□□ -0.77
MACF1-222	ENST00000494012	TCF4	P15884	667 aa		10.23	□□□□□ -0.77
MACF1-222	ENST00000494012	GOT1	P17174	413 aa		10.23	□□□□□ -0.77
MACF1-222	ENST00000494012	NBL1	P41271	181 aa		10.23	□□□□□ -0.77
MACF1-222	ENST00000494012	CTSO	P43234	321 aa	Predicted RBP	10.23	□□□□□ -0.77
MACF1-222	ENST00000494012	CLCN6	P51797	869 aa		10.23	□□□□□ -0.77
MACF1-222	ENST00000494012	VAV2	P52735	878 aa		10.23	□□□□□ -0.77
MACF1-222	ENST00000494012	KIF5A	Q12840	1032 aa		10.23	□□□□□ -0.77
MACF1-222	ENST00000494012	CAMK2G	Q13555	558 aa	Predicted RBP	10.23	□□□□□ -0.77
MACF1-222	ENST00000494012	BYSL	Q13895	437 aa	Known RBP	10.23	□□□□□ -0.77
MACF1-222	ENST00000494012	PDK2	Q15119	407 aa		10.23	□□□□□ -0.77
MACF1-222	ENST00000494012	CA9	Q16790	459 aa		10.23	□□□□□ -0.77
MACF1-222	ENST00000494012	HNRNPA1L2	Q32P51	320 aa	Known RBP	10.23	□□□□□ -0.77
MACF1-222	ENST00000494012	IL31	Q6EBC2	164 aa		10.23	□□□□□ -0.77
MACF1-222	ENST00000494012	C11orf63	Q6NUN7	778 aa		10.23	□□□□□ -0.77
MACF1-222	ENST00000494012	KIAA1211L	Q6NV74	962 aa		10.23	□□□□□ -0.77
MACF1-222	ENST00000494012	C11orf74	Q86VG3	221 aa		10.23	□□□□□ -0.77
MACF1-222	ENST00000494012	MAP7D3	Q8IWC1	876 aa		10.23	□□□□□ -0.77
MACF1-222	ENST00000494012	UMODL1-AS1	Q8N2C9	162 aa		10.23	□□□□□ -0.77
MACF1-222	ENST00000494012	SPACA7	Q96KW9	195 aa		10.23	□□□□□ -0.77
MACF1-222	ENST00000494012	RPL10L	Q96L21	214 aa	Known RBP	10.23	□□□□□ -0.77
MACF1-222	ENST00000494012	MRGPRX3	Q96LB0	322 aa		10.23	□□□□□ -0.77
MACF1-222	ENST00000494012	SPON2	Q9BUD6	331 aa		10.23	□□□□□ -0.77
MACF1-222	ENST00000494012	MAGEB5	Q9BZ81	275 aa		10.23	□□□□□ -0.77
MACF1-222	ENST00000494012	SEMA4A	Q9H3S1	761 aa		10.23	□□□□□ -0.77
MACF1-222	ENST00000494012	CD248	Q9HCU0	757 aa		10.23	□□□□□ -0.77
MACF1-222	ENST00000494012	VPS51	Q9UID3	782 aa		10.23	□□□□□ -0.77
MACF1-222	ENST00000494012	RAD54B	Q9Y620	910 aa		10.23	□□□□□ -0.77
MACF1-222	ENST00000494012	TARSL2	A2RTX5	802 aa	Known RBP	10.22	□□□□□ -0.77
MACF1-222	ENST00000494012	ZSCAN5C	A6NGD5	496 aa	Predicted RBP	10.22	□□□□□ -0.77
MACF1-222	ENST00000494012	RNASEH1	O60930	286 aa	Known RBP	10.22	□□□□□ -0.77
MACF1-222	ENST00000494012	LILRB5	O75023	590 aa		10.22	□□□□□ -0.77
MACF1-222	ENST00000494012	ZNF217	O75362	1048 aa		10.22	□□□□□ -0.77
MACF1-222	ENST00000494012	RPP40	O75818	363 aa	Known RBP	10.22	□□□□□ -0.77
MACF1-222	ENST00000494012	HLA-E	P13747	358 aa		10.22	□□□□□ -0.77
MACF1-222	ENST00000494012	GABRG2	P18507	467 aa		10.22	□□□□□ -0.77
MACF1-222	ENST00000494012	SERPINB6	P35237	376 aa		10.22	□□□□□ -0.77
MACF1-222	ENST00000494012	GJC1	P36383	396 aa		10.22	□□□□□ -0.77
MACF1-222	ENST00000494012	PXN	P49023	591 aa	Predicted RBP	10.22	□□□□□ -0.77
MACF1-222	ENST00000494012	STK19	P49842	368 aa	Predicted RBP	10.22	□□□□□ -0.77
MACF1-222	ENST00000494012	SERPINH1	P50454	418 aa	Known RBP	10.22	□□□□□ -0.77

Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms