RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 PLEKHA7Q6IQ23 1121 aa23.24■■□□□ 1.31
SNIP1-203ENST00000493916 DCUN1D2Q6PH85 259 aa23.24■■□□□ 1.31
SNIP1-203ENST00000493916 ZNF783Q6ZMS7 281 aa23.24■■□□□ 1.31
SNIP1-203ENST00000493916 DEFB119Q8N690 84 aa23.24■■□□□ 1.31
SNIP1-203ENST00000493916 CCDC185Q8N715 623 aa23.24■■□□□ 1.31
SNIP1-203ENST00000493916 CADM4Q8NFZ8 388 aa23.24■■□□□ 1.31
SNIP1-203ENST00000493916 HSPA12BQ96MM6 686 aa23.24■■□□□ 1.31
SNIP1-203ENST00000493916 CNPY3Q9BT09 278 aa23.24■■□□□ 1.31
SNIP1-203ENST00000493916 RETREG1Q9H6L5 497 aa23.24■■□□□ 1.31
SNIP1-203ENST00000493916 TMEM74BQ9NUR3 256 aa23.24■■□□□ 1.31
SNIP1-203ENST00000493916 PARVAQ9NVD7 372 aa23.24■■□□□ 1.31
SNIP1-203ENST00000493916 OR12D3Q9UGF7 316 aa23.24■■□□□ 1.31
SNIP1-203ENST00000493916 SLC25A13Q9UJS0 675 aa23.24■■□□□ 1.31
SNIP1-203ENST00000493916 SCML1Q9UN30 329 aa23.24■■□□□ 1.31
SNIP1-203ENST00000493916 BZW2Q9Y6E2 419 aaKnown RBP23.24■■□□□ 1.31
SNIP1-203ENST00000493916 SDK1Q7Z5N4 2213 aa23.23■■□□□ 1.31
SNIP1-203ENST00000493916 KHNYNO15037 678 aaKnown RBP23.23■■□□□ 1.31
SNIP1-203ENST00000493916 RNASEH1O60930 286 aaKnown RBP23.23■■□□□ 1.31
SNIP1-203ENST00000493916 DNTTP04053 509 aa23.23■■□□□ 1.31
SNIP1-203ENST00000493916 SKILP12757 684 aa23.23■■□□□ 1.31
SNIP1-203ENST00000493916 OR1E1P30953 314 aa23.23■■□□□ 1.31
SNIP1-203ENST00000493916 MAMLD1Q13495 774 aa23.23■■□□□ 1.31
SNIP1-203ENST00000493916 TTC31Q49AM3 519 aaPredicted RBP23.23■■□□□ 1.31
SNIP1-203ENST00000493916 TFAP2DQ7Z6R9 452 aa23.23■■□□□ 1.31
SNIP1-203ENST00000493916 FRS2Q8WU20 508 aa23.23■■□□□ 1.31
SNIP1-203ENST00000493916 PSMB7Q99436 277 aa23.23■■□□□ 1.31
SNIP1-203ENST00000493916 RTKNQ9BST9 563 aa23.23■■□□□ 1.31
SNIP1-203ENST00000493916 C2orf49Q9BVC5 232 aaPredicted RBP23.23■■□□□ 1.31
SNIP1-203ENST00000493916 XPO4Q9C0E2 1151 aaKnown RBP23.23■■□□□ 1.31
SNIP1-203ENST00000493916 PCED1AQ9H1Q7 454 aa23.23■■□□□ 1.31
SNIP1-203ENST00000493916 RXFP3Q9NSD7 469 aa23.23■■□□□ 1.31
SNIP1-203ENST00000493916 NYNRINQ9P2P1 1898 aaKnown RBP23.23■■□□□ 1.31
SNIP1-203ENST00000493916 ILVBLA1L0T0 632 aa23.22■■□□□ 1.31
SNIP1-203ENST00000493916 SLC30A4O14863 429 aa23.22■■□□□ 1.31
SNIP1-203ENST00000493916 ATP9BO43861 1147 aa23.22■■□□□ 1.31
SNIP1-203ENST00000493916 RTN2O75298 545 aa23.22■■□□□ 1.31
SNIP1-203ENST00000493916 FTLP02792 175 aaPredicted RBP23.22■■□□□ 1.31
SNIP1-203ENST00000493916 GYPCP04921 128 aa23.22■■□□□ 1.31
SNIP1-203ENST00000493916 DESP17661 470 aa23.22■■□□□ 1.31
SNIP1-203ENST00000493916 NUMBP49757 651 aa23.22■■□□□ 1.31
SNIP1-203ENST00000493916 AIF1P55008 147 aa23.22■■□□□ 1.31
SNIP1-203ENST00000493916 KRT83P78385 493 aa23.22■■□□□ 1.31
SNIP1-203ENST00000493916 NFKBIBQ15653 356 aa23.22■■□□□ 1.31
SNIP1-203ENST00000493916 RABEPKQ7Z6M1 372 aa23.22■■□□□ 1.31
SNIP1-203ENST00000493916 DCAF4L2Q8NA75 395 aa23.22■■□□□ 1.31
SNIP1-203ENST00000493916 CEP76Q8TAP6 659 aa23.22■■□□□ 1.31
SNIP1-203ENST00000493916 PTPRN2Q92932 1015 aa23.22■■□□□ 1.31
SNIP1-203ENST00000493916 TRIM11Q96F44 468 aa23.22■■□□□ 1.31
SNIP1-203ENST00000493916 GPR174Q9BXC1 333 aa23.22■■□□□ 1.31
SNIP1-203ENST00000493916 PABPC3Q9H361 631 aaKnown RBP23.22■■□□□ 1.31
SNIP1-203ENST00000493916 NEU3Q9UQ49 428 aa23.22■■□□□ 1.31
SNIP1-203ENST00000493916 HS3ST2Q9Y278 367 aa23.22■■□□□ 1.31
SNIP1-203ENST00000493916 ATXN2Q99700 1313 aaKnown RBP23.22■■□□□ 1.31
SNIP1-203ENST00000493916 CEP192Q8TEP8 1941 aa23.21■■□□□ 1.31
SNIP1-203ENST00000493916 LNP1A1A4G5 178 aa23.21■■□□□ 1.31
SNIP1-203ENST00000493916 PATE3B3GLJ2 98 aa23.21■■□□□ 1.31
SNIP1-203ENST00000493916 ATMINO43313 823 aaPredicted RBP23.21■■□□□ 1.31
SNIP1-203ENST00000493916 PLEKP08567 350 aaPredicted RBP23.21■■□□□ 1.31
SNIP1-203ENST00000493916 OGDHQ02218 1023 aa23.21■■□□□ 1.31
SNIP1-203ENST00000493916 ELAVL3Q14576 367 aaKnown RBP23.21■■□□□ 1.31
SNIP1-203ENST00000493916 TRIM61Q5EBN2 209 aa23.21■■□□□ 1.31
SNIP1-203ENST00000493916 SYCP2LQ5T4T6 812 aa23.21■■□□□ 1.31
SNIP1-203ENST00000493916 USP30Q70CQ3 517 aa23.21■■□□□ 1.31
SNIP1-203ENST00000493916 SLFN11Q7Z7L1 901 aa23.21■■□□□ 1.31
SNIP1-203ENST00000493916 SH2D3CQ8N5H7 860 aa23.21■■□□□ 1.31
SNIP1-203ENST00000493916 FAM129BQ96TA1 746 aa23.21■■□□□ 1.31
SNIP1-203ENST00000493916 ISCUQ9H1K1 167 aa23.21■■□□□ 1.31
SNIP1-203ENST00000493916 VPS51Q9UID3 782 aa23.21■■□□□ 1.31
SNIP1-203ENST00000493916 LUC7L2Q9Y383 392 aaKnown RBP23.21■■□□□ 1.31
SNIP1-203ENST00000493916 DOCK4Q8N1I0 1966 aa23.21■■□□□ 1.31
SNIP1-203ENST00000493916 A0A0D9SEW6 157 aa23.2■■□□□ 1.3
SNIP1-203ENST00000493916 FAM72CH0Y354 149 aa23.2■■□□□ 1.3
SNIP1-203ENST00000493916 CBFA2T2O43439 604 aa23.2■■□□□ 1.3
SNIP1-203ENST00000493916 SERPING1P05155 500 aa23.2■■□□□ 1.3
SNIP1-203ENST00000493916 MYBL1P10243 752 aa23.2■■□□□ 1.3
SNIP1-203ENST00000493916 RHOQP17081 205 aa23.2■■□□□ 1.3
SNIP1-203ENST00000493916 SFSWAPQ12872 951 aaKnown RBP23.2■■□□□ 1.3
SNIP1-203ENST00000493916 CST6Q15828 149 aa23.2■■□□□ 1.3
SNIP1-203ENST00000493916 TDRD12Q587J7 1177 aaKnown RBP23.2■■□□□ 1.3
SNIP1-203ENST00000493916 WDR45BQ5MNZ6 344 aa23.2■■□□□ 1.3
SNIP1-203ENST00000493916 FAM72AQ5TYM5 149 aa23.2■■□□□ 1.3
SNIP1-203ENST00000493916 FAM72DQ6L9T8 149 aa23.2■■□□□ 1.3
SNIP1-203ENST00000493916 SLC23A3Q6PIS1 610 aa23.2■■□□□ 1.3
SNIP1-203ENST00000493916 ERMP1Q7Z2K6 904 aa23.2■■□□□ 1.3
SNIP1-203ENST00000493916 TMC6Q7Z403 805 aa23.2■■□□□ 1.3
SNIP1-203ENST00000493916 FAM124AQ86V42 546 aa23.2■■□□□ 1.3
SNIP1-203ENST00000493916 NLRP14Q86W24 1093 aa23.2■■□□□ 1.3
SNIP1-203ENST00000493916 FAM72BQ86X60 149 aa23.2■■□□□ 1.3
SNIP1-203ENST00000493916 CPLX3Q8WVH0 158 aa23.2■■□□□ 1.3
SNIP1-203ENST00000493916 TBC1D31Q96DN5 1066 aa23.2■■□□□ 1.3
SNIP1-203ENST00000493916 EDEM2Q9BV94 578 aa23.2■■□□□ 1.3
SNIP1-203ENST00000493916 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP23.2■■□□□ 1.32e-6■■■■□ 19.9
SNIP1-203ENST00000493916 SCINQ9Y6U3 715 aa23.2■■□□□ 1.3
SNIP1-203ENST00000493916 CACNA1AO00555 2505 aa23.19■■□□□ 1.3
SNIP1-203ENST00000493916 LRIG2O94898 1065 aa23.19■■□□□ 1.3
SNIP1-203ENST00000493916 VAV1P15498 845 aa23.19■■□□□ 1.3
SNIP1-203ENST00000493916 MAPKAPK2P49137 400 aa23.19■■□□□ 1.3
SNIP1-203ENST00000493916 DUOXA1Q1HG43 343 aa23.19■■□□□ 1.3
SNIP1-203ENST00000493916 EFHC2Q5JST6 749 aa23.19■■□□□ 1.3
SNIP1-203ENST00000493916 STPG1Q5TH74 334 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms