RNA–Protein interactions for RNA: ENST00000493903.1

GTF3A-208, Transcript of general transcription factor IIIA, humanhuman

TSL 3

Gene GTF3A, Length 748 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-208ENST00000493903 DEUP1Q05D60 604 aa4.73□□□□□ -1.65
GTF3A-208ENST00000493903 NIPAL4Q0D2K0 466 aa4.73□□□□□ -1.65
GTF3A-208ENST00000493903 CCDC15Q0P6D6 951 aa4.73□□□□□ -1.65
GTF3A-208ENST00000493903 TFCP2Q12800 502 aa4.73□□□□□ -1.65
GTF3A-208ENST00000493903 GXYLT1Q4G148 440 aa4.73□□□□□ -1.65
GTF3A-208ENST00000493903 UBAP2Q5T6F2 1119 aaKnown RBP4.73□□□□□ -1.65
GTF3A-208ENST00000493903 NUGGCQ68CJ6 796 aa4.73□□□□□ -1.65
GTF3A-208ENST00000493903 IL27RAQ6UWB1 636 aa4.73□□□□□ -1.65
GTF3A-208ENST00000493903 PTCHD4Q6ZW05 846 aa4.73□□□□□ -1.65
GTF3A-208ENST00000493903 CHST9Q7L1S5 443 aa4.73□□□□□ -1.65
GTF3A-208ENST00000493903 MAVSQ7Z434 540 aa4.73□□□□□ -1.65
GTF3A-208ENST00000493903 PRRT2Q7Z6L0 340 aaPredicted RBP4.73□□□□□ -1.65
GTF3A-208ENST00000493903 TICAM1Q8IUC6 712 aa4.73□□□□□ -1.65
GTF3A-208ENST00000493903 PLD5Q8N7P1 536 aa4.73□□□□□ -1.65
GTF3A-208ENST00000493903 ZNF713Q8N859 430 aaPredicted RBP4.73□□□□□ -1.65
GTF3A-208ENST00000493903 AVL9Q8NBF6 648 aa4.73□□□□□ -1.65
GTF3A-208ENST00000493903 B3GALNT2Q8NCR0 500 aa4.73□□□□□ -1.65
GTF3A-208ENST00000493903 R3HDM4Q96D70 268 aa4.73□□□□□ -1.65
GTF3A-208ENST00000493903 RNF31Q96EP0 1072 aa4.73□□□□□ -1.65
GTF3A-208ENST00000493903 HIC2Q96JB3 615 aa4.73□□□□□ -1.65
GTF3A-208ENST00000493903 KLHL15Q96M94 604 aa4.73□□□□□ -1.65
GTF3A-208ENST00000493903 ELOVL1Q9BW60 279 aa4.73□□□□□ -1.65
GTF3A-208ENST00000493903 XYLT2Q9H1B5 865 aa4.73□□□□□ -1.65
GTF3A-208ENST00000493903 SFXN1Q9H9B4 322 aa4.73□□□□□ -1.65
GTF3A-208ENST00000493903 SNX15Q9NRS6 342 aa4.73□□□□□ -1.65
GTF3A-208ENST00000493903 MGAT4CQ9UBM8 478 aa4.73□□□□□ -1.65
GTF3A-208ENST00000493903 ACAD8Q9UKU7 415 aa4.73□□□□□ -1.65
GTF3A-208ENST00000493903 MTMR6Q9Y217 621 aa4.73□□□□□ -1.65
GTF3A-208ENST00000493903 CCL27Q9Y4X3 112 aa4.73□□□□□ -1.65
GTF3A-208ENST00000493903 PEG3Q9GZU2 1588 aa4.73□□□□□ -1.65
GTF3A-208ENST00000493903 LAMC3Q9Y6N6 1575 aa4.73□□□□□ -1.65
GTF3A-208ENST00000493903 KIF21AQ7Z4S6 1674 aa4.73□□□□□ -1.65
GTF3A-208ENST00000493903 AOX1Q06278 1338 aa4.72□□□□□ -1.65
GTF3A-208ENST00000493903 A0A1W2PRG0 241 aa4.72□□□□□ -1.65
GTF3A-208ENST00000493903 GLOD5A6NK44 160 aa4.72□□□□□ -1.65
GTF3A-208ENST00000493903 CAPN14A8MX76 684 aa4.72□□□□□ -1.65
GTF3A-208ENST00000493903 LAMTOR5O43504 91 aa4.72□□□□□ -1.65
GTF3A-208ENST00000493903 HBP1O60381 514 aa4.72□□□□□ -1.65
GTF3A-208ENST00000493903 PAGE4O60829 102 aa4.72□□□□□ -1.65
GTF3A-208ENST00000493903 TJP3O95049 919 aa4.72□□□□□ -1.65
GTF3A-208ENST00000493903 AFPP02771 609 aaKnown RBP4.72□□□□□ -1.65
GTF3A-208ENST00000493903 ERBB2P04626 1255 aa4.72□□□□□ -1.65
GTF3A-208ENST00000493903 HNRNPCP07910 306 aaKnown RBP eCLIP4.72□□□□□ -1.65
GTF3A-208ENST00000493903 HOXB9P17482 250 aaPredicted RBP4.72□□□□□ -1.65
GTF3A-208ENST00000493903 HOXA5P20719 270 aa4.72□□□□□ -1.65
GTF3A-208ENST00000493903 MCM3P25205 808 aa4.72□□□□□ -1.65
GTF3A-208ENST00000493903 TTKP33981 857 aa4.72□□□□□ -1.65
GTF3A-208ENST00000493903 ZNF41P51814 821 aaPredicted RBP4.72□□□□□ -1.65
GTF3A-208ENST00000493903 OAZ1P54368 228 aa4.72□□□□□ -1.65
GTF3A-208ENST00000493903 TNFAIP1Q13829 316 aa4.72□□□□□ -1.65
GTF3A-208ENST00000493903 SLC18A3Q16572 532 aa4.72□□□□□ -1.65
GTF3A-208ENST00000493903 ZNF362Q5T0B9 420 aaPredicted RBP4.72□□□□□ -1.65
GTF3A-208ENST00000493903 TREML2Q5T2D2 321 aa4.72□□□□□ -1.65
GTF3A-208ENST00000493903 NT5DC1Q5TFE4 455 aa4.72□□□□□ -1.65
GTF3A-208ENST00000493903 C11orf88Q6PI97 169 aa4.72□□□□□ -1.65
GTF3A-208ENST00000493903 C17orf99Q6UX52 265 aa4.72□□□□□ -1.65
GTF3A-208ENST00000493903 MAMDC4Q6UXC1 1216 aa4.72□□□□□ -1.65
GTF3A-208ENST00000493903 PARS2Q7L3T8 475 aaKnown RBP4.72□□□□□ -1.65
GTF3A-208ENST00000493903 GET4Q7L5D6 327 aaPredicted RBP4.72□□□□□ -1.65
GTF3A-208ENST00000493903 SLC46A3Q7Z3Q1 461 aa4.72□□□□□ -1.65
GTF3A-208ENST00000493903 BRSK2Q8IWQ3 736 aa4.72□□□□□ -1.65
GTF3A-208ENST00000493903 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.72□□□□□ -1.65
GTF3A-208ENST00000493903 LAS2Q8IYD9 372 aa4.72□□□□□ -1.65
GTF3A-208ENST00000493903 FUKQ8N0W3 1084 aa4.72□□□□□ -1.65
GTF3A-208ENST00000493903 SIRT6Q8N6T7 355 aa4.72□□□□□ -1.65
GTF3A-208ENST00000493903 POC5Q8NA72 575 aa4.72□□□□□ -1.65
GTF3A-208ENST00000493903 CADM4Q8NFZ8 388 aa4.72□□□□□ -1.65
GTF3A-208ENST00000493903 PRPF31Q8WWY3 499 aaKnown RBP4.72□□□□□ -1.65
GTF3A-208ENST00000493903 SLC22A18Q96BI1 424 aa4.72□□□□□ -1.65
GTF3A-208ENST00000493903 ZNF764Q96H86 408 aaPredicted RBP4.72□□□□□ -1.65
GTF3A-208ENST00000493903 JAKMIP1Q96N16 626 aaKnown RBP4.72□□□□□ -1.65
GTF3A-208ENST00000493903 PRR25Q96S07 402 aa4.72□□□□□ -1.65
GTF3A-208ENST00000493903 NCAPGQ9BPX3 1015 aa4.72□□□□□ -1.65
GTF3A-208ENST00000493903 ALG8Q9BVK2 526 aa4.72□□□□□ -1.65
GTF3A-208ENST00000493903 APOL6Q9BWW8 343 aa4.72□□□□□ -1.65
GTF3A-208ENST00000493903 ALOXE3Q9BYJ1 711 aa4.72□□□□□ -1.65
GTF3A-208ENST00000493903 TRIM31Q9BZY9 425 aa4.72□□□□□ -1.65
GTF3A-208ENST00000493903 GRPEL1Q9HAV7 217 aa4.72□□□□□ -1.65
GTF3A-208ENST00000493903 FBRSL1Q9HCM7 1045 aaKnown RBP4.72□□□□□ -1.65
GTF3A-208ENST00000493903 ARHGEF3Q9NR81 526 aa4.72□□□□□ -1.65
GTF3A-208ENST00000493903 ABHD10Q9NUJ1 306 aa4.72□□□□□ -1.65
GTF3A-208ENST00000493903 CWC25Q9NXE8 425 aaPredicted RBP4.72□□□□□ -1.65
GTF3A-208ENST00000493903 TAB2Q9NYJ8 693 aa4.72□□□□□ -1.65
GTF3A-208ENST00000493903 NCKIPSDQ9NZQ3 722 aa4.72□□□□□ -1.65
GTF3A-208ENST00000493903 TRPM5Q9NZQ8 1165 aa4.72□□□□□ -1.65
GTF3A-208ENST00000493903 PEMTQ9UBM1 199 aa4.72□□□□□ -1.65
GTF3A-208ENST00000493903 HSPB7Q9UBY9 170 aa4.72□□□□□ -1.65
GTF3A-208ENST00000493903 GTF3C4Q9UKN8 822 aa4.72□□□□□ -1.65
GTF3A-208ENST00000493903 ADAM18Q9Y3Q7 739 aa4.72□□□□□ -1.65
GTF3A-208ENST00000493903 SESN1Q9Y6P5 492 aa4.72□□□□□ -1.65
GTF3A-208ENST00000493903 XDHP47989 1333 aa4.72□□□□□ -1.65
GTF3A-208ENST00000493903 BAZ1BQ9UIG0 1483 aaKnown RBP4.71□□□□□ -1.66
GTF3A-208ENST00000493903 A0A0G2JLL6 359 aaPredicted RBP4.71□□□□□ -1.66
GTF3A-208ENST00000493903 H0Y626 953 aa4.71□□□□□ -1.66
GTF3A-208ENST00000493903 RNASET2O00584 256 aaKnown RBP4.71□□□□□ -1.66
GTF3A-208ENST00000493903 SCAMP1O15126 338 aa4.71□□□□□ -1.66
GTF3A-208ENST00000493903 PROM1O43490 865 aa4.71□□□□□ -1.66
GTF3A-208ENST00000493903 NXPH3O95157 252 aa4.71□□□□□ -1.66
GTF3A-208ENST00000493903 C1RP00736 705 aa4.71□□□□□ -1.66
GTF3A-208ENST00000493903 FESP07332 822 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms