RNA–Protein interactions for RNA: ENST00000493727.5

UPF3A-210, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 937 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-210ENST00000493727 ANKRD11Q6UB99 2663 aaPredicted RBP12.61□□□□□ -0.39
UPF3A-210ENST00000493727 A0A0U1RQJ8 604 aa12.6□□□□□ -0.39
UPF3A-210ENST00000493727 ZNF840PA6NDX5 716 aa12.6□□□□□ -0.39
UPF3A-210ENST00000493727 GJB6O95452 261 aa12.6□□□□□ -0.39
UPF3A-210ENST00000493727 APBB3O95704 486 aa12.6□□□□□ -0.39
UPF3A-210ENST00000493727 CELA2BP08218 269 aaPredicted RBP12.6□□□□□ -0.39
UPF3A-210ENST00000493727 KRT3P12035 628 aa12.6□□□□□ -0.39
UPF3A-210ENST00000493727 DESP17661 470 aa12.6□□□□□ -0.39
UPF3A-210ENST00000493727 YWHAQP27348 245 aa12.6□□□□□ -0.39
UPF3A-210ENST00000493727 GSCP56915 257 aaPredicted RBP12.6□□□□□ -0.39
UPF3A-210ENST00000493727 DAOAP59103 153 aa12.6□□□□□ -0.39
UPF3A-210ENST00000493727 RNASE9P60153 205 aaKnown RBP12.6□□□□□ -0.39
UPF3A-210ENST00000493727 DMC1Q14565 340 aa12.6□□□□□ -0.39
UPF3A-210ENST00000493727 ELF2Q15723 593 aa12.6□□□□□ -0.39
UPF3A-210ENST00000493727 PLK5Q496M5 336 aa12.6□□□□□ -0.39
UPF3A-210ENST00000493727 EFHC1Q5JVL4 640 aa12.6□□□□□ -0.39
UPF3A-210ENST00000493727 TCEAL6Q6IPX3 200 aa12.6□□□□□ -0.39
UPF3A-210ENST00000493727 ZSCAN30Q86W11 494 aa12.6□□□□□ -0.39
UPF3A-210ENST00000493727 TREML1Q86YW5 311 aa12.6□□□□□ -0.39
UPF3A-210ENST00000493727 C17orf53Q8N3J3 647 aaPredicted RBP12.6□□□□□ -0.39
UPF3A-210ENST00000493727 RPLP0P6Q8NHW5 317 aa12.6□□□□□ -0.39
UPF3A-210ENST00000493727 CLEC4CQ8WTT0 213 aa12.6□□□□□ -0.39
UPF3A-210ENST00000493727 OVCA2Q8WZ82 227 aa12.6□□□□□ -0.39
UPF3A-210ENST00000493727 IRGQQ8WZA9 623 aa12.6□□□□□ -0.39
UPF3A-210ENST00000493727 TCEAL3Q969E4 200 aa12.6□□□□□ -0.39
UPF3A-210ENST00000493727 MCEEQ96PE7 176 aa12.6□□□□□ -0.39
UPF3A-210ENST00000493727 SLC30A3Q99726 388 aa12.6□□□□□ -0.39
UPF3A-210ENST00000493727 LACRTQ9GZZ8 138 aa12.6□□□□□ -0.39
UPF3A-210ENST00000493727 FBRSL1Q9HCM7 1045 aaKnown RBP12.6□□□□□ -0.39
UPF3A-210ENST00000493727 TRIM10Q9UDY6 481 aa12.6□□□□□ -0.39
UPF3A-210ENST00000493727 EBF1Q9UH73 591 aa12.6□□□□□ -0.39
UPF3A-210ENST00000493727 WASF3Q9UPY6 502 aa12.6□□□□□ -0.39
UPF3A-210ENST00000493727 LOC400499M0QZD8 3231 aa12.6□□□□□ -0.39
UPF3A-210ENST00000493727 DSPP15924 2871 aaKnown RBP12.59□□□□□ -0.39
UPF3A-210ENST00000493727 A0A0A6YYK5 440 aaPredicted RBP12.59□□□□□ -0.39
UPF3A-210ENST00000493727 TMEM110-MUSTN1A8MSY1 372 aa12.59□□□□□ -0.39
UPF3A-210ENST00000493727 BTNL10A8MVZ5 291 aa12.59□□□□□ -0.39
UPF3A-210ENST00000493727 C1QTNF9BB2RNN3 333 aa12.59□□□□□ -0.39
UPF3A-210ENST00000493727 LEFTY2O00292 366 aa12.59□□□□□ -0.39
UPF3A-210ENST00000493727 CAPN9O14815 690 aa12.59□□□□□ -0.39
UPF3A-210ENST00000493727 BUB1O43683 1085 aa12.59□□□□□ -0.39
UPF3A-210ENST00000493727 HSF2BPO75031 334 aa12.59□□□□□ -0.39
UPF3A-210ENST00000493727 GRAP2O75791 330 aa12.59□□□□□ -0.39
UPF3A-210ENST00000493727 RHOBTB1O94844 696 aa12.59□□□□□ -0.39
UPF3A-210ENST00000493727 OLFM2O95897 454 aa12.59□□□□□ -0.39
UPF3A-210ENST00000493727 OAS1P00973 400 aaKnown RBP12.59□□□□□ -0.39
UPF3A-210ENST00000493727 C1QTNF9P0C862 333 aa12.59□□□□□ -0.39
UPF3A-210ENST00000493727 ARAFP10398 606 aa12.59□□□□□ -0.39
UPF3A-210ENST00000493727 EIF2DP41214 584 aaKnown RBP12.59□□□□□ -0.39
UPF3A-210ENST00000493727 MAMLD1Q13495 774 aa12.59□□□□□ -0.39
UPF3A-210ENST00000493727 PLEKHA7Q6IQ23 1121 aa12.59□□□□□ -0.39
UPF3A-210ENST00000493727 PSAPL1Q6NUJ1 521 aa12.59□□□□□ -0.39
UPF3A-210ENST00000493727 OLFML1Q6UWY5 402 aa12.59□□□□□ -0.39
UPF3A-210ENST00000493727 SLC26A9Q7LBE3 791 aa12.59□□□□□ -0.39
UPF3A-210ENST00000493727 ARHGAP18Q8N392 663 aa12.59□□□□□ -0.39
UPF3A-210ENST00000493727 SLC35G2Q8TBE7 412 aa12.59□□□□□ -0.39
UPF3A-210ENST00000493727 KIAA1524Q8TCG1 905 aa12.59□□□□□ -0.39
UPF3A-210ENST00000493727 NDRG1Q92597 394 aaKnown RBP12.59□□□□□ -0.39
UPF3A-210ENST00000493727 ALS2CR12Q96Q35 445 aa12.59□□□□□ -0.39
UPF3A-210ENST00000493727 HHIPQ96QV1 700 aa12.59□□□□□ -0.39
UPF3A-210ENST00000493727 TRIM62Q9BVG3 475 aa12.59□□□□□ -0.39
UPF3A-210ENST00000493727 DUSP15Q9H1R2 295 aaPredicted RBP12.59□□□□□ -0.39
UPF3A-210ENST00000493727 VPS45Q9NRW7 570 aa12.59□□□□□ -0.39
UPF3A-210ENST00000493727 POLR3BQ9NW08 1133 aaPredicted RBP12.59□□□□□ -0.39
UPF3A-210ENST00000493727 GMIPQ9P107 970 aa12.59□□□□□ -0.39
UPF3A-210ENST00000493727 STIM2Q9P246 746 aa12.59□□□□□ -0.39
UPF3A-210ENST00000493727 TBC1D14Q9P2M4 693 aa12.59□□□□□ -0.39
UPF3A-210ENST00000493727 KLF15Q9UIH9 416 aa12.59□□□□□ -0.39
UPF3A-210ENST00000493727 ANAPC7Q9UJX3 599 aa12.59□□□□□ -0.39
UPF3A-210ENST00000493727 SCML2Q9UQR0 700 aa12.59□□□□□ -0.39
UPF3A-210ENST00000493727 PAXBP1Q9Y5B6 917 aa12.59□□□□□ -0.39
UPF3A-210ENST00000493727 SIGLEC16A6NMB1 481 aa12.58□□□□□ -0.4
UPF3A-210ENST00000493727 USP27XA6NNY8 438 aa12.58□□□□□ -0.4
UPF3A-210ENST00000493727 KIF5CO60282 957 aa12.58□□□□□ -0.4
UPF3A-210ENST00000493727 DAB1O75553 588 aa12.58□□□□□ -0.4
UPF3A-210ENST00000493727 ABL1P00519 1130 aa12.58□□□□□ -0.4
UPF3A-210ENST00000493727 LTFP02788 710 aa12.58□□□□□ -0.4
UPF3A-210ENST00000493727 GLI1P08151 1106 aa12.58□□□□□ -0.4
UPF3A-210ENST00000493727 ARHGAP25P42331 645 aa12.58□□□□□ -0.4
UPF3A-210ENST00000493727 ARSDP51689 593 aa12.58□□□□□ -0.4
UPF3A-210ENST00000493727 YWHAGP61981 247 aaKnown RBP eCLIP12.58□□□□□ -0.4
UPF3A-210ENST00000493727 MRPS21P82921 87 aaKnown RBP12.58□□□□□ -0.4
UPF3A-210ENST00000493727 TAF10Q12962 218 aa12.58□□□□□ -0.4
UPF3A-210ENST00000493727 TAF5Q15542 800 aa12.58□□□□□ -0.4
UPF3A-210ENST00000493727 HSF5Q4G112 596 aaPredicted RBP12.58□□□□□ -0.4
UPF3A-210ENST00000493727 PREPLQ4J6C6 727 aaPredicted RBP12.58□□□□□ -0.4
UPF3A-210ENST00000493727 BTBD8Q5XKL5 378 aa12.58□□□□□ -0.4
UPF3A-210ENST00000493727 RNF43Q68DV7 783 aa12.58□□□□□ -0.4
UPF3A-210ENST00000493727 PM20D1Q6GTS8 502 aa12.58□□□□□ -0.4
UPF3A-210ENST00000493727 UNQ6494/PRO21346Q6UXR6 183 aa12.58□□□□□ -0.4
UPF3A-210ENST00000493727 ZNF662Q6ZS27 426 aa12.58□□□□□ -0.4
UPF3A-210ENST00000493727 REXO1L1PQ8IX06 675 aa12.58□□□□□ -0.4
UPF3A-210ENST00000493727 TSTD1Q8NFU3 115 aa12.58□□□□□ -0.4
UPF3A-210ENST00000493727 OTUB2Q96DC9 234 aa12.58□□□□□ -0.4
UPF3A-210ENST00000493727 PIWIL1Q96J94 861 aaKnown RBP12.58□□□□□ -0.4
UPF3A-210ENST00000493727 LINC00597Q9H2U6 94 aa12.58□□□□□ -0.4
UPF3A-210ENST00000493727 OSGEPQ9NPF4 335 aa12.58□□□□□ -0.4
UPF3A-210ENST00000493727 TLR8Q9NR97 1041 aaKnown RBP12.58□□□□□ -0.4
UPF3A-210ENST00000493727 ASNSD1Q9NWL6 643 aa12.58□□□□□ -0.4
UPF3A-210ENST00000493727 CPQQ9Y646 472 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms