RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 C12orf40Q86WS4 652 aa13.8□□□□□ -0.2
MSH6-208ENST00000493177 DCLK2Q8N568 766 aa13.8□□□□□ -0.2
MSH6-208ENST00000493177 CAMKK1Q8N5S9 505 aa13.8□□□□□ -0.2
MSH6-208ENST00000493177 SUMF1Q8NBK3 374 aa13.8□□□□□ -0.2
MSH6-208ENST00000493177 TSTD1Q8NFU3 115 aa13.8□□□□□ -0.2
MSH6-208ENST00000493177 CAPZA3Q96KX2 299 aa13.8□□□□□ -0.2
MSH6-208ENST00000493177 CSPG4P5Q96PW8 444 aa13.8□□□□□ -0.2
MSH6-208ENST00000493177 PRMT1Q99873 361 aaKnown RBP13.8□□□□□ -0.2
MSH6-208ENST00000493177 ZNF670Q9BS34 389 aa13.8□□□□□ -0.2
MSH6-208ENST00000493177 HEMGNQ9BXL5 484 aa13.8□□□□□ -0.2
MSH6-208ENST00000493177 DNAJC17Q9NVM6 304 aaKnown RBP13.8□□□□□ -0.2
MSH6-208ENST00000493177 CWC15Q9P013 229 aaKnown RBP13.8□□□□□ -0.2
MSH6-208ENST00000493177 CACNA1HO95180 2353 aa13.8□□□□□ -0.2
MSH6-208ENST00000493177 C3orf70A6NLC5 250 aaPredicted RBP13.79□□□□□ -0.2
MSH6-208ENST00000493177 HOXC11O43248 304 aaPredicted RBP13.79□□□□□ -0.2
MSH6-208ENST00000493177 APBB3O95704 486 aa13.79□□□□□ -0.2
MSH6-208ENST00000493177 CYBBP04839 570 aa13.79□□□□□ -0.2
MSH6-208ENST00000493177 KRT10P13645 584 aa13.79□□□□□ -0.2
MSH6-208ENST00000493177 TYRP14679 529 aa13.79□□□□□ -0.2
MSH6-208ENST00000493177 AMPD1P23109 780 aa13.79□□□□□ -0.2
MSH6-208ENST00000493177 HTR7P34969 479 aa13.79□□□□□ -0.2
MSH6-208ENST00000493177 CDKN2BP42772 138 aa13.79□□□□□ -0.2
MSH6-208ENST00000493177 DGKEP52429 567 aa13.79□□□□□ -0.2
MSH6-208ENST00000493177 DYNLT1P63172 113 aa13.79□□□□□ -0.2
MSH6-208ENST00000493177 MRPS21P82921 87 aaKnown RBP13.79□□□□□ -0.2
MSH6-208ENST00000493177 SEMA3BQ13214 749 aa13.79□□□□□ -0.2
MSH6-208ENST00000493177 SRSF5Q13243 272 aaKnown RBP13.79□□□□□ -0.2
MSH6-208ENST00000493177 PPP2R5EQ16537 467 aa13.79□□□□□ -0.2
MSH6-208ENST00000493177 ANKRD20A8PQ5CZ79 823 aa13.79□□□□□ -0.2
MSH6-208ENST00000493177 TFDP3Q5H9I0 405 aa13.79□□□□□ -0.2
MSH6-208ENST00000493177 CCDC181Q5TID7 509 aa13.79□□□□□ -0.2
MSH6-208ENST00000493177 LAIR1Q6GTX8 287 aa13.79□□□□□ -0.2
MSH6-208ENST00000493177 TMEM25Q86YD3 366 aa13.79□□□□□ -0.2
MSH6-208ENST00000493177 CFAP52Q8N1V2 620 aa13.79□□□□□ -0.2
MSH6-208ENST00000493177 CPXM2Q8N436 756 aa13.79□□□□□ -0.2
MSH6-208ENST00000493177 CCDC33Q8N5R6 958 aa13.79□□□□□ -0.2
MSH6-208ENST00000493177 HJURPQ8NCD3 748 aaPredicted RBP13.79□□□□□ -0.2
MSH6-208ENST00000493177 FAM71BQ8TC56 605 aa13.79□□□□□ -0.2
MSH6-208ENST00000493177 DDI1Q8WTU0 396 aa13.79□□□□□ -0.2
MSH6-208ENST00000493177 COG1Q8WTW3 980 aa13.79□□□□□ -0.2
MSH6-208ENST00000493177 BHMTQ93088 406 aa13.79□□□□□ -0.2
MSH6-208ENST00000493177 IGSF8Q969P0 613 aa13.79□□□□□ -0.2
MSH6-208ENST00000493177 TMA16Q96EY4 203 aaKnown RBP13.79□□□□□ -0.2
MSH6-208ENST00000493177 RNF157Q96PX1 679 aa13.79□□□□□ -0.2
MSH6-208ENST00000493177 OSBPL8Q9BZF1 889 aa13.79□□□□□ -0.2
MSH6-208ENST00000493177 ZYG11BQ9C0D3 744 aa13.79□□□□□ -0.2
MSH6-208ENST00000493177 CATSPERBQ9H7T0 1116 aa13.79□□□□□ -0.2
MSH6-208ENST00000493177 MPP6Q9NZW5 540 aa13.79□□□□□ -0.2
MSH6-208ENST00000493177 RCOR3Q9P2K3 495 aaPredicted RBP13.79□□□□□ -0.2
MSH6-208ENST00000493177 STOML2Q9UJZ1 356 aa13.79□□□□□ -0.2
MSH6-208ENST00000493177 hCG_1818297A0A087WSY0 165 aa13.78□□□□□ -0.2
MSH6-208ENST00000493177 K7EQS6 105 aa13.78□□□□□ -0.2
MSH6-208ENST00000493177 APOL1O14791 398 aa13.78□□□□□ -0.2
MSH6-208ENST00000493177 AXIN1O15169 862 aa13.78□□□□□ -0.2
MSH6-208ENST00000493177 ZNF185O15231 689 aa13.78□□□□□ -0.2
MSH6-208ENST00000493177 FGF10O15520 208 aaPredicted RBP13.78□□□□□ -0.2
MSH6-208ENST00000493177 TBL1XO60907 577 aa13.78□□□□□ -0.2
MSH6-208ENST00000493177 TULP3O75386 442 aa13.78□□□□□ -0.2
MSH6-208ENST00000493177 RPP40O75818 363 aaKnown RBP13.78□□□□□ -0.2
MSH6-208ENST00000493177 ALDH1A2O94788 518 aa13.78□□□□□ -0.2
MSH6-208ENST00000493177 KLF8O95600 359 aaPredicted RBP13.78□□□□□ -0.2
MSH6-208ENST00000493177 PRLRP16471 622 aa13.78□□□□□ -0.2
MSH6-208ENST00000493177 IL4RP24394 825 aa13.78□□□□□ -0.2
MSH6-208ENST00000493177 HCAR3P49019 387 aa13.78□□□□□ -0.2
MSH6-208ENST00000493177 SGSHP51688 502 aa13.78□□□□□ -0.2
MSH6-208ENST00000493177 RPS24P62847 133 aaKnown RBP13.78□□□□□ -0.2
MSH6-208ENST00000493177 TFDP2Q14188 446 aa13.78□□□□□ -0.2
MSH6-208ENST00000493177 LONRF2Q1L5Z9 754 aa13.78□□□□□ -0.2
MSH6-208ENST00000493177 GAB4Q2WGN9 574 aa13.78□□□□□ -0.2
MSH6-208ENST00000493177 MPPE1Q53F39 396 aa13.78□□□□□ -0.2
MSH6-208ENST00000493177 EOGTQ5NDL2 527 aa13.78□□□□□ -0.2
MSH6-208ENST00000493177 MANEALQ5VSG8 457 aa13.78□□□□□ -0.2
MSH6-208ENST00000493177 TRMT11Q7Z4G4 463 aaKnown RBP13.78□□□□□ -0.2
MSH6-208ENST00000493177 ANKS1BQ7Z6G8 1248 aa13.78□□□□□ -0.2
MSH6-208ENST00000493177 CIR1Q86X95 450 aaPredicted RBP13.78□□□□□ -0.2
MSH6-208ENST00000493177 CCDC117Q8IWD4 279 aaPredicted RBP13.78□□□□□ -0.2
MSH6-208ENST00000493177 FAM217AQ8IXS0 508 aa13.78□□□□□ -0.2
MSH6-208ENST00000493177 PGBD3Q8N328 593 aa13.78□□□□□ -0.2
MSH6-208ENST00000493177 TXNDC5Q8NBS9 432 aaKnown RBP13.78□□□□□ -0.2
MSH6-208ENST00000493177 USP33Q8TEY7 942 aa13.78□□□□□ -0.2
MSH6-208ENST00000493177 TSC1Q92574 1164 aa13.78□□□□□ -0.2
MSH6-208ENST00000493177 EZH1Q92800 747 aaPredicted RBP13.78□□□□□ -0.2
MSH6-208ENST00000493177 MYEOVQ96EZ4 313 aa13.78□□□□□ -0.2
MSH6-208ENST00000493177 PRICKLE1Q96MT3 831 aaPredicted RBP13.78□□□□□ -0.2
MSH6-208ENST00000493177 POLMQ9NP87 494 aaPredicted RBP13.78□□□□□ -0.2
MSH6-208ENST00000493177 POLR3BQ9NW08 1133 aaPredicted RBP13.78□□□□□ -0.2
MSH6-208ENST00000493177 BCCIPQ9P287 314 aaKnown RBP eCLIP13.78□□□□□ -0.2
MSH6-208ENST00000493177 PPARGC1AQ9UBK2 798 aaKnown RBP13.78□□□□□ -0.2
MSH6-208ENST00000493177 CCDC163A0A0D9SF12 145 aa13.77□□□□□ -0.21
MSH6-208ENST00000493177 DRGXA6NNA5 263 aa13.77□□□□□ -0.21
MSH6-208ENST00000493177 ZNF487B1APH4 448 aa13.77□□□□□ -0.21
MSH6-208ENST00000493177 ZBTB24O43167 697 aaPredicted RBP13.77□□□□□ -0.21
MSH6-208ENST00000493177 HRO43593 1189 aa13.77□□□□□ -0.21
MSH6-208ENST00000493177 CST8O60676 142 aa13.77□□□□□ -0.21
MSH6-208ENST00000493177 CNTN5O94779 1100 aa13.77□□□□□ -0.21
MSH6-208ENST00000493177 TJP3O95049 919 aa13.77□□□□□ -0.21
MSH6-208ENST00000493177 FGGP02679 453 aa13.77□□□□□ -0.21
MSH6-208ENST00000493177 ZFXP17010 805 aaPredicted RBP13.77□□□□□ -0.21
MSH6-208ENST00000493177 RHOQP17081 205 aa13.77□□□□□ -0.21
MSH6-208ENST00000493177 ERCC2P18074 760 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms