RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 ZKSCAN5Q9Y2L8 839 aa4.33□□□□□ -1.72
BRCA1-220ENST00000492859 TRAF6Q9Y4K3 522 aa4.33□□□□□ -1.72
BRCA1-220ENST00000492859 PCDHA9Q9Y5H5 950 aa4.33□□□□□ -1.72
BRCA1-220ENST00000492859 PCDHA10Q9Y5I2 948 aa4.33□□□□□ -1.72
BRCA1-220ENST00000492859 USP3Q9Y6I4 520 aa4.33□□□□□ -1.72
BRCA1-220ENST00000492859 FHAD1B1AJZ9 1412 aa4.32□□□□□ -1.72
BRCA1-220ENST00000492859 ASXL2Q76L83 1435 aa4.32□□□□□ -1.72
BRCA1-220ENST00000492859 KIF27Q86VH2 1401 aa4.32□□□□□ -1.72
BRCA1-220ENST00000492859 ADCY9O60503 1353 aa4.32□□□□□ -1.72
BRCA1-220ENST00000492859 A0A1B0GTQ1 180 aa4.32□□□□□ -1.72
BRCA1-220ENST00000492859 A0A1W2PP55 124 aa4.32□□□□□ -1.72
BRCA1-220ENST00000492859 TMEM120BA0PK00 339 aa4.32□□□□□ -1.72
BRCA1-220ENST00000492859 ANKRD34BA5PLL1 514 aa4.32□□□□□ -1.72
BRCA1-220ENST00000492859 HMX3A6NHT5 357 aa4.32□□□□□ -1.72
BRCA1-220ENST00000492859 POLRMTO00411 1230 aaKnown RBP4.32□□□□□ -1.72
BRCA1-220ENST00000492859 SYN3O14994 580 aa4.32□□□□□ -1.72
BRCA1-220ENST00000492859 NKRFO15226 690 aaKnown RBP eCLIP4.32□□□□□ -1.72
BRCA1-220ENST00000492859 EIF3DO15371 548 aaKnown RBP eCLIP4.32□□□□□ -1.72
BRCA1-220ENST00000492859 DLX3O60479 287 aa4.32□□□□□ -1.72
BRCA1-220ENST00000492859 NDUFS2O75306 463 aa4.32□□□□□ -1.72
BRCA1-220ENST00000492859 MFN2O95140 757 aa4.32□□□□□ -1.72
BRCA1-220ENST00000492859 APOEP02649 317 aa4.32□□□□□ -1.72
BRCA1-220ENST00000492859 INHAP05111 366 aa4.32□□□□□ -1.72
BRCA1-220ENST00000492859 NFICP08651 508 aa4.32□□□□□ -1.72
BRCA1-220ENST00000492859 ZCCHC18P0CG32 403 aa4.32□□□□□ -1.72
BRCA1-220ENST00000492859 BMP2P12643 396 aa4.32□□□□□ -1.72
BRCA1-220ENST00000492859 KRT4P19013 534 aa4.32□□□□□ -1.72
BRCA1-220ENST00000492859 CYP2B6P20813 491 aa4.32□□□□□ -1.72
BRCA1-220ENST00000492859 AGXTP21549 392 aa4.32□□□□□ -1.72
BRCA1-220ENST00000492859 PTPN6P29350 595 aa4.32□□□□□ -1.72
BRCA1-220ENST00000492859 SLC7A1P30825 629 aa4.32□□□□□ -1.72
BRCA1-220ENST00000492859 CHRNA3P32297 505 aa4.32□□□□□ -1.72
BRCA1-220ENST00000492859 MCM7P33993 719 aa4.32□□□□□ -1.72
BRCA1-220ENST00000492859 CAPZA2P47755 286 aa4.32□□□□□ -1.72
BRCA1-220ENST00000492859 CEBPAP49715 358 aaPredicted RBP4.32□□□□□ -1.72
BRCA1-220ENST00000492859 ARSEP51690 589 aa4.32□□□□□ -1.72
BRCA1-220ENST00000492859 ADCY7P51828 1080 aa4.32□□□□□ -1.72
BRCA1-220ENST00000492859 OAZ1P54368 228 aa4.32□□□□□ -1.72
BRCA1-220ENST00000492859 MLLT6P55198 1093 aaPredicted RBP4.32□□□□□ -1.72
BRCA1-220ENST00000492859 RPS3AP61247 264 aaKnown RBP4.32□□□□□ -1.72
BRCA1-220ENST00000492859 RRS1Q15050 365 aaKnown RBP4.32□□□□□ -1.72
BRCA1-220ENST00000492859 PDCD1Q15116 288 aa4.32□□□□□ -1.72
BRCA1-220ENST00000492859 SF3B4Q15427 424 aaKnown RBP eCLIP4.32□□□□□ -1.72
BRCA1-220ENST00000492859 ALX1Q15699 326 aa4.32□□□□□ -1.72
BRCA1-220ENST00000492859 LEXMQ3ZCV2 418 aa4.32□□□□□ -1.72
BRCA1-220ENST00000492859 FAM98BQ52LJ0 330 aaKnown RBP4.32□□□□□ -1.72
BRCA1-220ENST00000492859 SPDYAQ5MJ70 313 aa4.32□□□□□ -1.72
BRCA1-220ENST00000492859 FAM69AQ5T7M9 428 aa4.32□□□□□ -1.72
BRCA1-220ENST00000492859 RIPPLY2Q5TAB7 128 aa4.32□□□□□ -1.72
BRCA1-220ENST00000492859 SIGIRRQ6IA17 410 aa4.32□□□□□ -1.72
BRCA1-220ENST00000492859 KCNT2Q6UVM3 1135 aa4.32□□□□□ -1.72
BRCA1-220ENST00000492859 LRRC31Q6UY01 552 aa4.32□□□□□ -1.72
BRCA1-220ENST00000492859 SYT10Q6XYQ8 523 aa4.32□□□□□ -1.72
BRCA1-220ENST00000492859 DTHD1Q6ZMT9 781 aa4.32□□□□□ -1.72
BRCA1-220ENST00000492859 ZC3HAV1Q7Z2W4 902 aaKnown RBP4.32□□□□□ -1.72
BRCA1-220ENST00000492859 MIER3Q7Z3K6 550 aa4.32□□□□□ -1.72
BRCA1-220ENST00000492859 ZNF438Q7Z4V0 828 aa4.32□□□□□ -1.72
BRCA1-220ENST00000492859 RTN4RL1Q86UN2 441 aaPredicted RBP4.32□□□□□ -1.72
BRCA1-220ENST00000492859 CCDC25Q86WR0 208 aa4.32□□□□□ -1.72
BRCA1-220ENST00000492859 HACE1Q8IYU2 909 aa4.32□□□□□ -1.72
BRCA1-220ENST00000492859 ELMOD2Q8IZ81 293 aa4.32□□□□□ -1.72
BRCA1-220ENST00000492859 SIX6OS1Q8N1H7 587 aa4.32□□□□□ -1.72
BRCA1-220ENST00000492859 LINC00528Q8N1L1 170 aa4.32□□□□□ -1.72
BRCA1-220ENST00000492859 GALNT4Q8N4A0 578 aa4.32□□□□□ -1.72
BRCA1-220ENST00000492859 WDTC1Q8N5D0 677 aa4.32□□□□□ -1.72
BRCA1-220ENST00000492859 MEIOBQ8N635 442 aa4.32□□□□□ -1.72
BRCA1-220ENST00000492859 USHBP1Q8N6Y0 703 aa4.32□□□□□ -1.72
BRCA1-220ENST00000492859 MCPH1Q8NEM0 835 aa4.32□□□□□ -1.72
BRCA1-220ENST00000492859 TTLQ8NG68 377 aa4.32□□□□□ -1.72
BRCA1-220ENST00000492859 OR8K1Q8NGG5 319 aa4.32□□□□□ -1.72
BRCA1-220ENST00000492859 OR1N1Q8NGS0 311 aa4.32□□□□□ -1.72
BRCA1-220ENST00000492859 CHURC1Q8WUH1 139 aa4.32□□□□□ -1.72
BRCA1-220ENST00000492859 DYDC1Q8WWB3 177 aa4.32□□□□□ -1.72
BRCA1-220ENST00000492859 THAP4Q8WY91 577 aa4.32□□□□□ -1.72
BRCA1-220ENST00000492859 SEPT8Q92599 483 aa4.32□□□□□ -1.72
BRCA1-220ENST00000492859 ABHD8Q96I13 439 aa4.32□□□□□ -1.72
BRCA1-220ENST00000492859 PTCHD1Q96NR3 888 aa4.32□□□□□ -1.72
BRCA1-220ENST00000492859 NECAB3Q96P71 396 aaPredicted RBP4.32□□□□□ -1.72
BRCA1-220ENST00000492859 OSBPL9Q96SU4 736 aa4.32□□□□□ -1.72
BRCA1-220ENST00000492859 THAP2Q9H0W7 228 aa4.32□□□□□ -1.72
BRCA1-220ENST00000492859 IKZF4Q9H2S9 585 aa4.32□□□□□ -1.72
BRCA1-220ENST00000492859 KCNF1Q9H3M0 494 aa4.32□□□□□ -1.72
BRCA1-220ENST00000492859 MUC13Q9H3R2 512 aa4.32□□□□□ -1.72
BRCA1-220ENST00000492859 RIBC2Q9H4K1 309 aa4.32□□□□□ -1.72
BRCA1-220ENST00000492859 LRRC40Q9H9A6 602 aa4.32□□□□□ -1.72
BRCA1-220ENST00000492859 KLC4Q9NSK0 619 aa4.32□□□□□ -1.72
BRCA1-220ENST00000492859 LMBRD1Q9NUN5 540 aa4.32□□□□□ -1.72
BRCA1-220ENST00000492859 TMEM140Q9NV12 185 aa4.32□□□□□ -1.72
BRCA1-220ENST00000492859 TBC1D13Q9NVG8 400 aa4.32□□□□□ -1.72
BRCA1-220ENST00000492859 FAM120CQ9NX05 1096 aaKnown RBP4.32□□□□□ -1.72
BRCA1-220ENST00000492859 ARHGEF38Q9NXL2 777 aa4.32□□□□□ -1.72
BRCA1-220ENST00000492859 CNIH4Q9P003 139 aa4.32□□□□□ -1.72
BRCA1-220ENST00000492859 LRP2BPQ9P2M1 347 aa4.32□□□□□ -1.72
BRCA1-220ENST00000492859 CRNNQ9UBG3 495 aaPredicted RBP4.32□□□□□ -1.72
BRCA1-220ENST00000492859 DNMT3LQ9UJW3 386 aa4.32□□□□□ -1.72
BRCA1-220ENST00000492859 SOX13Q9UN79 622 aa4.32□□□□□ -1.72
BRCA1-220ENST00000492859 GPC6Q9Y625 555 aaPredicted RBP4.32□□□□□ -1.72
BRCA1-220ENST00000492859 STON1Q9Y6Q2 735 aa4.32□□□□□ -1.72
BRCA1-220ENST00000492859 CCDC171Q6TFL3 1326 aa4.32□□□□□ -1.72
BRCA1-220ENST00000492859 A0A0A0MRY4 1105 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms