RNA–Protein interactions for RNA: ENST00000492772.1

SND1-215, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-215ENST00000492772 RAP1GAP2Q684P5 730 aa11.35□□□□□ -0.59
SND1-215ENST00000492772 PCSK4Q6UW60 755 aa11.35□□□□□ -0.59
SND1-215ENST00000492772 KRBA2Q6ZNG9 492 aa11.35□□□□□ -0.59
SND1-215ENST00000492772 BEND5Q7L4P6 421 aa11.35□□□□□ -0.59
SND1-215ENST00000492772 TAC4Q86UU9 113 aa11.35□□□□□ -0.59
SND1-215ENST00000492772 APCDD1Q8J025 514 aa11.35□□□□□ -0.59
SND1-215ENST00000492772 OR4C6Q8NH72 309 aa11.35□□□□□ -0.59
SND1-215ENST00000492772 SNX21Q969T3 373 aa11.35□□□□□ -0.59
SND1-215ENST00000492772 FAM149B1Q96BN6 582 aa11.35□□□□□ -0.59
SND1-215ENST00000492772 CCDC34Q96HJ3 373 aa11.35□□□□□ -0.59
SND1-215ENST00000492772 BTN2A3PQ96KV6 586 aa11.35□□□□□ -0.59
SND1-215ENST00000492772 DEPDC7Q96QD5 511 aa11.35□□□□□ -0.59
SND1-215ENST00000492772 MIS12Q9H081 205 aa11.35□□□□□ -0.59
SND1-215ENST00000492772 PREBQ9HCU5 417 aa11.35□□□□□ -0.59
SND1-215ENST00000492772 EVA1BQ9NVM1 165 aa11.35□□□□□ -0.59
SND1-215ENST00000492772 PCDHB4Q9Y5E5 795 aa11.35□□□□□ -0.59
SND1-215ENST00000492772 A0A1B0GVM2 712 aa11.34□□□□□ -0.59
SND1-215ENST00000492772 TCAF2A6NFQ2 919 aa11.34□□□□□ -0.59
SND1-215ENST00000492772 TRIM38O00635 465 aa11.34□□□□□ -0.59
SND1-215ENST00000492772 DXOO77932 396 aaKnown RBP11.34□□□□□ -0.59
SND1-215ENST00000492772 FYNP06241 537 aa11.34□□□□□ -0.59
SND1-215ENST00000492772 ALPPL2P10696 532 aa11.34□□□□□ -0.59
SND1-215ENST00000492772 VAV1P15498 845 aa11.34□□□□□ -0.59
SND1-215ENST00000492772 PDGFRAP16234 1089 aa11.34□□□□□ -0.59
SND1-215ENST00000492772 BRD2P25440 801 aaKnown RBP11.34□□□□□ -0.59
SND1-215ENST00000492772 PLK1P53350 603 aa11.34□□□□□ -0.59
SND1-215ENST00000492772 METAP1P53582 386 aa11.34□□□□□ -0.59
SND1-215ENST00000492772 LRMPQ12912 555 aa11.34□□□□□ -0.59
SND1-215ENST00000492772 PKP1Q13835 747 aa11.34□□□□□ -0.59
SND1-215ENST00000492772 RABGAP1LQ5R372 815 aa11.34□□□□□ -0.59
SND1-215ENST00000492772 AGBL4Q5VU57 503 aa11.34□□□□□ -0.59
SND1-215ENST00000492772 HSCBQ8IWL3 235 aa11.34□□□□□ -0.59
SND1-215ENST00000492772 SMYD4Q8IYR2 804 aaPredicted RBP11.34□□□□□ -0.59
SND1-215ENST00000492772 FRS2Q8WU20 508 aa11.34□□□□□ -0.59
SND1-215ENST00000492772 ERCC4Q92889 916 aaPredicted RBP11.34□□□□□ -0.59
SND1-215ENST00000492772 SLC35C1Q96A29 364 aa11.34□□□□□ -0.59
SND1-215ENST00000492772 KLHDC7BQ96G42 594 aa11.34□□□□□ -0.59
SND1-215ENST00000492772 HIC2Q96JB3 615 aa11.34□□□□□ -0.59
SND1-215ENST00000492772 NT5C1BQ96P26 610 aa11.34□□□□□ -0.59
SND1-215ENST00000492772 PPP1R9BQ96SB3 815 aa11.34□□□□□ -0.59
SND1-215ENST00000492772 USP29Q9HBJ7 922 aa11.34□□□□□ -0.59
SND1-215ENST00000492772 RMND1Q9NWS8 449 aa11.34□□□□□ -0.59
SND1-215ENST00000492772 ARMCX3Q9UH62 379 aaPredicted RBP11.34□□□□□ -0.59
SND1-215ENST00000492772 SLC25A13Q9UJS0 675 aa11.34□□□□□ -0.59
SND1-215ENST00000492772 NAALADL1Q9UQQ1 740 aa11.34□□□□□ -0.59
SND1-215ENST00000492772 PCDHB1Q9Y5F3 818 aa11.34□□□□□ -0.59
SND1-215ENST00000492772 COL6A6A6NMZ7 2263 aa11.33□□□□□ -0.6
SND1-215ENST00000492772 GP1BAP07359 652 aa11.33□□□□□ -0.6
SND1-215ENST00000492772 THEGLP0DJG4 465 aa11.33□□□□□ -0.6
SND1-215ENST00000492772 CKMT1AP12532 417 aa11.33□□□□□ -0.6
SND1-215ENST00000492772 DGKAP23743 735 aa11.33□□□□□ -0.6
SND1-215ENST00000492772 ACADSBP45954 432 aa11.33□□□□□ -0.6
SND1-215ENST00000492772 RPL34P49207 117 aaKnown RBP11.33□□□□□ -0.6
SND1-215ENST00000492772 ERVPABLB-1P60509 514 aa11.33□□□□□ -0.6
SND1-215ENST00000492772 GABREP78334 506 aa11.33□□□□□ -0.6
SND1-215ENST00000492772 KRT85P78386 507 aa11.33□□□□□ -0.6
SND1-215ENST00000492772 FKBP3Q00688 224 aaKnown RBP11.33□□□□□ -0.6
SND1-215ENST00000492772 CNTN1Q12860 1018 aa11.33□□□□□ -0.6
SND1-215ENST00000492772 COBLL1Q53SF7 1204 aa11.33□□□□□ -0.6
SND1-215ENST00000492772 CDCP2Q5VXM1 449 aa11.33□□□□□ -0.6
SND1-215ENST00000492772 CCAR2Q8N163 923 aaKnown RBP11.33□□□□□ -0.6
SND1-215ENST00000492772 PPM1KQ8N3J5 372 aa11.33□□□□□ -0.6
SND1-215ENST00000492772 SLC25A45Q8N413 288 aa11.33□□□□□ -0.6
SND1-215ENST00000492772 ATP6V0D2Q8N8Y2 350 aa11.33□□□□□ -0.6
SND1-215ENST00000492772 TMEM145Q8NBT3 493 aa11.33□□□□□ -0.6
SND1-215ENST00000492772 KCNE4Q8WWG9 221 aa11.33□□□□□ -0.6
SND1-215ENST00000492772 ZSWIM1Q9BR11 485 aa11.33□□□□□ -0.6
SND1-215ENST00000492772 ST7Q9NRC1 585 aa11.33□□□□□ -0.6
SND1-215ENST00000492772 KLHL11Q9NVR0 708 aa11.33□□□□□ -0.6
SND1-215ENST00000492772 SLC12A6Q9UHW9 1150 aa11.33□□□□□ -0.6
SND1-215ENST00000492772 XPO7Q9UIA9 1087 aaKnown RBP11.33□□□□□ -0.6
SND1-215ENST00000492772 SARDHQ9UL12 918 aa11.33□□□□□ -0.6
SND1-215ENST00000492772 PPM1HQ9ULR3 514 aa11.33□□□□□ -0.6
SND1-215ENST00000492772 MYO18BQ8IUG5 2567 aa11.33□□□□□ -0.6
SND1-215ENST00000492772 A0A1W2PQ27 194 aa11.32□□□□□ -0.6
SND1-215ENST00000492772 A0A1W2PQ64 194 aa11.32□□□□□ -0.6
SND1-215ENST00000492772 KCNU1A8MYU2 1149 aa11.32□□□□□ -0.6
SND1-215ENST00000492772 MCF2LO15068 1137 aa11.32□□□□□ -0.6
SND1-215ENST00000492772 PMM2O15305 246 aa11.32□□□□□ -0.6
SND1-215ENST00000492772 FFAR2O15552 330 aa11.32□□□□□ -0.6
SND1-215ENST00000492772 ATP9BO43861 1147 aa11.32□□□□□ -0.6
SND1-215ENST00000492772 LZTS3O60299 673 aaPredicted RBP11.32□□□□□ -0.6
SND1-215ENST00000492772 OPA1O60313 960 aa11.32□□□□□ -0.6
SND1-215ENST00000492772 USP12O75317 370 aa11.32□□□□□ -0.6
SND1-215ENST00000492772 TRUB2O95900 331 aaKnown RBP11.32□□□□□ -0.6
SND1-215ENST00000492772 IGLV3-25P01717 112 aa11.32□□□□□ -0.6
SND1-215ENST00000492772 MPOP05164 745 aa11.32□□□□□ -0.6
SND1-215ENST00000492772 SLC2A3P11169 496 aa11.32□□□□□ -0.6
SND1-215ENST00000492772 ZNF18P17022 549 aa11.32□□□□□ -0.6
SND1-215ENST00000492772 AKT2P31751 481 aa11.32□□□□□ -0.6
SND1-215ENST00000492772 LSSP48449 732 aa11.32□□□□□ -0.6
SND1-215ENST00000492772 FMO5P49326 533 aa11.32□□□□□ -0.6
SND1-215ENST00000492772 DUSP3P51452 185 aaPredicted RBP11.32□□□□□ -0.6
SND1-215ENST00000492772 LRRC63Q05C16 580 aa11.32□□□□□ -0.6
SND1-215ENST00000492772 CCDC15Q0P6D6 951 aa11.32□□□□□ -0.6
SND1-215ENST00000492772 KCNMA1Q12791 1236 aa11.32□□□□□ -0.6
SND1-215ENST00000492772 MEA1Q16626 185 aa11.32□□□□□ -0.6
SND1-215ENST00000492772 ACCSLQ4AC99 568 aa11.32□□□□□ -0.6
SND1-215ENST00000492772 ZC3H12AQ5D1E8 599 aaKnown RBP11.32□□□□□ -0.6
SND1-215ENST00000492772 SYPL2Q5VXT5 272 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms