RNA–Protein interactions for RNA: ENST00000492449.5

VPS8-225, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 1 (best)

Gene VPS8, Length 2,980 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-225ENST00000492449 MFSD7Q6UXD7 560 aa9.89□□□□□ -0.83
VPS8-225ENST00000492449 SLC22A16Q86VW1 577 aa9.89□□□□□ -0.83
VPS8-225ENST00000492449 SNX32Q86XE0 403 aa9.89□□□□□ -0.83
VPS8-225ENST00000492449 CAMK1DQ8IU85 385 aa9.89□□□□□ -0.83
VPS8-225ENST00000492449 C12orf56Q8IXR9 622 aa9.89□□□□□ -0.83
VPS8-225ENST00000492449 ANKRD13AQ8IZ07 590 aa9.89□□□□□ -0.83
VPS8-225ENST00000492449 SLC4A11Q8NBS3 891 aa9.89□□□□□ -0.83
VPS8-225ENST00000492449 PIK3C3Q8NEB9 887 aa9.89□□□□□ -0.83
VPS8-225ENST00000492449 SNX19Q92543 992 aa9.89□□□□□ -0.83
VPS8-225ENST00000492449 PGBD4Q96DM1 585 aa9.89□□□□□ -0.83
VPS8-225ENST00000492449 NRBF2Q96F24 287 aa9.89□□□□□ -0.83
VPS8-225ENST00000492449 VCPIP1Q96JH7 1222 aa9.89□□□□□ -0.83
VPS8-225ENST00000492449 MRPL47Q9HD33 250 aaKnown RBP9.89□□□□□ -0.83
VPS8-225ENST00000492449 PCDHGC3Q9UN70 934 aa9.89□□□□□ -0.83
VPS8-225ENST00000492449 PCDHGA8Q9Y5G5 932 aa9.89□□□□□ -0.83
VPS8-225ENST00000492449 MAU2Q9Y6X3 613 aa9.89□□□□□ -0.83
VPS8-225ENST00000492449 AURKAO14965 403 aa9.88□□□□□ -0.83
VPS8-225ENST00000492449 TMCC2O75069 709 aa9.88□□□□□ -0.83
VPS8-225ENST00000492449 CCDC159P0C7I6 412 aa9.88□□□□□ -0.83
VPS8-225ENST00000492449 BMP1P13497 986 aa9.88□□□□□ -0.83
VPS8-225ENST00000492449 GJC1P36383 396 aa9.88□□□□□ -0.83
VPS8-225ENST00000492449 ZNF135P52742 658 aaPredicted RBP9.88□□□□□ -0.83
VPS8-225ENST00000492449 RAD23AP54725 363 aa9.88□□□□□ -0.83
VPS8-225ENST00000492449 PKNOX1P55347 436 aa9.88□□□□□ -0.83
VPS8-225ENST00000492449 KCNQ4P56696 695 aa9.88□□□□□ -0.83
VPS8-225ENST00000492449 COPZ1P61923 177 aa9.88□□□□□ -0.83
VPS8-225ENST00000492449 PRAMEP78395 509 aa9.88□□□□□ -0.83
VPS8-225ENST00000492449 BASP1P80723 227 aaKnown RBP9.88□□□□□ -0.83
VPS8-225ENST00000492449 SLC10A2Q12908 348 aaPredicted RBP9.88□□□□□ -0.83
VPS8-225ENST00000492449 PCLAFQ15004 111 aa9.88□□□□□ -0.83
VPS8-225ENST00000492449 USP17L2Q6R6M4 530 aa9.88□□□□□ -0.83
VPS8-225ENST00000492449 UBE2Q1Q7Z7E8 422 aa9.88□□□□□ -0.83
VPS8-225ENST00000492449 CTAGE3PQ8IX95 158 aa9.88□□□□□ -0.83
VPS8-225ENST00000492449 ELMOD2Q8IZ81 293 aa9.88□□□□□ -0.83
VPS8-225ENST00000492449 SEPT8Q92599 483 aa9.88□□□□□ -0.83
VPS8-225ENST00000492449 FKBP10Q96AY3 582 aa9.88□□□□□ -0.83
VPS8-225ENST00000492449 COA7Q96BR5 231 aa9.88□□□□□ -0.83
VPS8-225ENST00000492449 NGLY1Q96IV0 654 aa9.88□□□□□ -0.83
VPS8-225ENST00000492449 MTG1Q9BT17 334 aaPredicted RBP9.88□□□□□ -0.83
VPS8-225ENST00000492449 BCAS3Q9H6U6 928 aa9.88□□□□□ -0.83
VPS8-225ENST00000492449 KCNQ5Q9NR82 932 aa9.88□□□□□ -0.83
VPS8-225ENST00000492449 STMN3Q9NZ72 180 aa9.88□□□□□ -0.83
VPS8-225ENST00000492449 UBA2Q9UBT2 640 aaPredicted RBP9.88□□□□□ -0.83
VPS8-225ENST00000492449 TRMT112Q9UI30 125 aaKnown RBP9.88□□□□□ -0.83
VPS8-225ENST00000492449 UGT2A1Q9Y4X1 527 aa9.88□□□□□ -0.83
VPS8-225ENST00000492449 CDY2AQ9Y6F7 541 aa9.88□□□□□ -0.83
VPS8-225ENST00000492449 CDY1Q9Y6F8 540 aa9.88□□□□□ -0.83
VPS8-225ENST00000492449 STRCQ7RTU9 1775 aa9.88□□□□□ -0.83
VPS8-225ENST00000492449 RGPD3A6NKT7 1758 aaPredicted RBP9.88□□□□□ -0.83
VPS8-225ENST00000492449 RGPD4Q7Z3J3 1758 aa9.88□□□□□ -0.83
VPS8-225ENST00000492449 HMX2A2RU54 273 aa9.88□□□□□ -0.83
VPS8-225ENST00000492449 SHOXO15266 292 aa9.88□□□□□ -0.83
VPS8-225ENST00000492449 GPC4O75487 556 aa9.88□□□□□ -0.83
VPS8-225ENST00000492449 GALK2Q01415 458 aa9.88□□□□□ -0.83
VPS8-225ENST00000492449 CCDC28AQ8IWP9 274 aa9.88□□□□□ -0.83
VPS8-225ENST00000492449 SPARTQ8N0X7 666 aa9.88□□□□□ -0.83
VPS8-225ENST00000492449 CNTD1Q8N815 330 aa9.88□□□□□ -0.83
VPS8-225ENST00000492449 GRPEL2Q8TAA5 225 aa9.88□□□□□ -0.83
VPS8-225ENST00000492449 ZBED2Q9BTP6 218 aa9.88□□□□□ -0.83
VPS8-225ENST00000492449 SLA2Q9H6Q3 261 aa9.88□□□□□ -0.83
VPS8-225ENST00000492449 COG4Q9H9E3 785 aa9.88□□□□□ -0.83
VPS8-225ENST00000492449 MCM9Q9NXL9 1143 aa9.88□□□□□ -0.83
VPS8-225ENST00000492449 SNTG2Q9NY99 539 aa9.88□□□□□ -0.83
VPS8-225ENST00000492449 KCND2Q9NZV8 630 aa9.88□□□□□ -0.83
VPS8-225ENST00000492449 MTRRQ9UBK8 725 aa9.88□□□□□ -0.83
VPS8-225ENST00000492449 CNOT6Q9ULM6 557 aaKnown RBP9.88□□□□□ -0.83
VPS8-225ENST00000492449 RAD54BQ9Y620 910 aa9.88□□□□□ -0.83
VPS8-225ENST00000492449 SHANK3Q9BYB0 1731 aa9.88□□□□□ -0.83
VPS8-225ENST00000492449 ARID2Q68CP9 1835 aa9.87□□□□□ -0.83
VPS8-225ENST00000492449 TAF4O00268 1085 aa9.87□□□□□ -0.83
VPS8-225ENST00000492449 SNPHO15079 494 aa9.87□□□□□ -0.83
VPS8-225ENST00000492449 DNAJB5O75953 348 aa9.87□□□□□ -0.83
VPS8-225ENST00000492449 FAM13AO94988 1023 aa9.87□□□□□ -0.83
VPS8-225ENST00000492449 VAPBO95292 243 aa9.87□□□□□ -0.83
VPS8-225ENST00000492449 IFNB1P01574 187 aa9.87□□□□□ -0.83
VPS8-225ENST00000492449 USP17L8P0C7I0 530 aa9.87□□□□□ -0.83
VPS8-225ENST00000492449 RRM2P31350 389 aa9.87□□□□□ -0.83
VPS8-225ENST00000492449 CDKN2BP42772 138 aa9.87□□□□□ -0.83
VPS8-225ENST00000492449 QARSP47897 775 aaKnown RBP9.87□□□□□ -0.83
VPS8-225ENST00000492449 HK2P52789 917 aa9.87□□□□□ -0.83
VPS8-225ENST00000492449 ATN1P54259 1190 aaPredicted RBP9.87□□□□□ -0.83
VPS8-225ENST00000492449 MPP1Q00013 466 aa9.87□□□□□ -0.83
VPS8-225ENST00000492449 FCHO2Q0JRZ9 810 aa9.87□□□□□ -0.83
VPS8-225ENST00000492449 SLC12A1Q13621 1099 aa9.87□□□□□ -0.83
VPS8-225ENST00000492449 POU6F1Q14863 301 aa9.87□□□□□ -0.83
VPS8-225ENST00000492449 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.87□□□□□ -0.83
VPS8-225ENST00000492449 NDUFAF5Q5TEU4 345 aa9.87□□□□□ -0.83
VPS8-225ENST00000492449 VWA5B1Q5TIE3 1220 aa9.87□□□□□ -0.83
VPS8-225ENST00000492449 SLC9A4Q6AI14 798 aa9.87□□□□□ -0.83
VPS8-225ENST00000492449 XAF1Q6GPH4 301 aa9.87□□□□□ -0.83
VPS8-225ENST00000492449 RSBN1LQ6PCB5 846 aaPredicted RBP9.87□□□□□ -0.83
VPS8-225ENST00000492449 C1orf186Q6ZWK4 172 aa9.87□□□□□ -0.83
VPS8-225ENST00000492449 USP51Q70EK9 711 aa9.87□□□□□ -0.83
VPS8-225ENST00000492449 ERMP1Q7Z2K6 904 aa9.87□□□□□ -0.83
VPS8-225ENST00000492449 GLRX5Q86SX6 157 aa9.87□□□□□ -0.83
VPS8-225ENST00000492449 ZNF444Q8N0Y2 327 aaPredicted RBP9.87□□□□□ -0.83
VPS8-225ENST00000492449 PPM1NQ8N819 430 aa9.87□□□□□ -0.83
VPS8-225ENST00000492449 RCN3Q96D15 328 aa9.87□□□□□ -0.83
VPS8-225ENST00000492449 ACO2Q99798 780 aaKnown RBP9.87□□□□□ -0.83
VPS8-225ENST00000492449 EFCAB1Q9HAE3 211 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms