RNA–Protein interactions for RNA: ENST00000490692.1

PCSK9-202, Transcript of proprotein convertase subtilisin/kexin type 9, humanhuman

TSL 2

Gene PCSK9, Length 3,891 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK9-202ENST00000490692 NENFQ9UMX5 172 aa11.73□□□□□ -0.53
PCSK9-202ENST00000490692 TRIM38O00635 465 aa11.73□□□□□ -0.53
PCSK9-202ENST00000490692 BIRC5O15392 142 aa11.73□□□□□ -0.53
PCSK9-202ENST00000490692 MYL4P12829 197 aa11.73□□□□□ -0.53
PCSK9-202ENST00000490692 ZNF12P17014 697 aa11.73□□□□□ -0.53
PCSK9-202ENST00000490692 LRPAP1P30533 357 aa11.73□□□□□ -0.53
PCSK9-202ENST00000490692 CRHR1P34998 444 aa11.73□□□□□ -0.53
PCSK9-202ENST00000490692 SLC7A2P52569 658 aa11.73□□□□□ -0.53
PCSK9-202ENST00000490692 NKX2-5P52952 324 aaPredicted RBP11.73□□□□□ -0.53
PCSK9-202ENST00000490692 RAVER1Q8IY67 606 aaKnown RBP11.73□□□□□ -0.53
PCSK9-202ENST00000490692 OR5B17Q8NGF7 314 aa11.73□□□□□ -0.53
PCSK9-202ENST00000490692 AZIN2Q96A70 460 aa11.73□□□□□ -0.53
PCSK9-202ENST00000490692 ISOC1Q96CN7 298 aa11.73□□□□□ -0.53
PCSK9-202ENST00000490692 VCPIP1Q96JH7 1222 aa11.73□□□□□ -0.53
PCSK9-202ENST00000490692 CARD8Q9Y2G2 431 aa11.73□□□□□ -0.53
PCSK9-202ENST00000490692 PCDHA10Q9Y5I2 948 aa11.73□□□□□ -0.53
PCSK9-202ENST00000490692 GAKO14976 1311 aa11.72□□□□□ -0.53
PCSK9-202ENST00000490692 C16orf96A6NNT2 1141 aa11.72□□□□□ -0.53
PCSK9-202ENST00000490692 KCNK1O00180 336 aa11.72□□□□□ -0.53
PCSK9-202ENST00000490692 PPEF1O14829 653 aaPredicted RBP11.72□□□□□ -0.53
PCSK9-202ENST00000490692 UBDO15205 165 aa11.72□□□□□ -0.53
PCSK9-202ENST00000490692 PLIN3O60664 434 aa11.72□□□□□ -0.53
PCSK9-202ENST00000490692 CHRNGP07510 517 aa11.72□□□□□ -0.53
PCSK9-202ENST00000490692 PSAPP07602 524 aa11.72□□□□□ -0.53
PCSK9-202ENST00000490692 HNRNPLP14866 589 aaKnown RBP eCLIP11.72□□□□□ -0.53
PCSK9-202ENST00000490692 PSMB9P28065 219 aa11.72□□□□□ -0.53
PCSK9-202ENST00000490692 RPL14P50914 215 aaKnown RBP11.72□□□□□ -0.53
PCSK9-202ENST00000490692 DLG2Q15700 870 aa11.72□□□□□ -0.53
PCSK9-202ENST00000490692 DCAF6Q58WW2 860 aa11.72□□□□□ -0.53
PCSK9-202ENST00000490692 RC3H1Q5TC82 1133 aaKnown RBP11.72□□□□□ -0.53
PCSK9-202ENST00000490692 KCTD8Q6ZWB6 473 aa11.72□□□□□ -0.53
PCSK9-202ENST00000490692 STK32CQ86UX6 486 aa11.72□□□□□ -0.53
PCSK9-202ENST00000490692 CAMK1DQ8IU85 385 aa11.72□□□□□ -0.53
PCSK9-202ENST00000490692 CDAN1Q8IWY9 1227 aa11.72□□□□□ -0.53
PCSK9-202ENST00000490692 DAW1Q8N136 415 aa11.72□□□□□ -0.53
PCSK9-202ENST00000490692 MPP5Q8N3R9 675 aa11.72□□□□□ -0.53
PCSK9-202ENST00000490692 SLC4A11Q8NBS3 891 aa11.72□□□□□ -0.53
PCSK9-202ENST00000490692 RIT2Q99578 217 aa11.72□□□□□ -0.53
PCSK9-202ENST00000490692 HERC2P3Q9BVR0 1158 aa11.72□□□□□ -0.53
PCSK9-202ENST00000490692 CDH19Q9H159 772 aa11.72□□□□□ -0.53
PCSK9-202ENST00000490692 NYAP2Q9P242 653 aa11.72□□□□□ -0.53
PCSK9-202ENST00000490692 TSR3Q9UJK0 312 aaKnown RBP11.72□□□□□ -0.53
PCSK9-202ENST00000490692 ATP8B3O60423 1300 aa11.72□□□□□ -0.53
PCSK9-202ENST00000490692 DDTLA6NHG4 134 aaPredicted RBP11.72□□□□□ -0.53
PCSK9-202ENST00000490692 HDAC3O15379 428 aa11.72□□□□□ -0.53
PCSK9-202ENST00000490692 PCNAP12004 261 aa11.72□□□□□ -0.53
PCSK9-202ENST00000490692 GRIA4P48058 902 aa11.72□□□□□ -0.53
PCSK9-202ENST00000490692 SMUG1Q53HV7 270 aa11.72□□□□□ -0.53
PCSK9-202ENST00000490692 METTL21CQ5VZV1 264 aa11.72□□□□□ -0.53
PCSK9-202ENST00000490692 EBNA1BP2Q99848 306 aaKnown RBP11.72□□□□□ -0.53
PCSK9-202ENST00000490692 GPRC5DQ9NZD1 345 aa11.72□□□□□ -0.53
PCSK9-202ENST00000490692 COPG2Q9UBF2 871 aa11.72□□□□□ -0.53
PCSK9-202ENST00000490692 TRDMT1O14717 391 aaKnown RBP11.72□□□□□ -0.53
PCSK9-202ENST00000490692 LRCH4O75427 683 aa11.72□□□□□ -0.53
PCSK9-202ENST00000490692 LCP1P13796 627 aa11.72□□□□□ -0.53
PCSK9-202ENST00000490692 GP5P40197 560 aa11.72□□□□□ -0.53
PCSK9-202ENST00000490692 JAK3P52333 1124 aa11.72□□□□□ -0.53
PCSK9-202ENST00000490692 NDST2P52849 883 aa11.72□□□□□ -0.53
PCSK9-202ENST00000490692 FAM83EQ2M2I3 478 aa11.72□□□□□ -0.53
PCSK9-202ENST00000490692 LSM12Q3MHD2 195 aaKnown RBP11.72□□□□□ -0.53
PCSK9-202ENST00000490692 ZNF568Q3ZCX4 644 aa11.72□□□□□ -0.53
PCSK9-202ENST00000490692 CCDC153Q494R4 210 aa11.72□□□□□ -0.53
PCSK9-202ENST00000490692 SYTL1Q8IYJ3 562 aa11.72□□□□□ -0.53
PCSK9-202ENST00000490692 TTC30BQ8N4P2 665 aa11.72□□□□□ -0.53
PCSK9-202ENST00000490692 POC5Q8NA72 575 aa11.72□□□□□ -0.53
PCSK9-202ENST00000490692 ELMO2Q96JJ3 720 aa11.72□□□□□ -0.53
PCSK9-202ENST00000490692 RNF145Q96MT1 663 aa11.72□□□□□ -0.53
PCSK9-202ENST00000490692 SYT11Q9BT88 431 aa11.72□□□□□ -0.53
PCSK9-202ENST00000490692 SOX17Q9H6I2 414 aaPredicted RBP11.72□□□□□ -0.53
PCSK9-202ENST00000490692 FANCEQ9HB96 536 aa11.72□□□□□ -0.53
PCSK9-202ENST00000490692 VPS45Q9NRW7 570 aa11.72□□□□□ -0.53
PCSK9-202ENST00000490692 SATB2Q9UPW6 733 aa11.72□□□□□ -0.53
PCSK9-202ENST00000490692 MRPL42Q9Y6G3 142 aaKnown RBP11.72□□□□□ -0.53
PCSK9-202ENST00000490692 PAPPAQ13219 1627 aa11.72□□□□□ -0.53
PCSK9-202ENST00000490692 PHLPP1O60346 1717 aa11.71□□□□□ -0.53
PCSK9-202ENST00000490692 MYH11P35749 1972 aa11.71□□□□□ -0.53
PCSK9-202ENST00000490692 H3BNX3 289 aa11.71□□□□□ -0.53
PCSK9-202ENST00000490692 RNASEH2AO75792 299 aaKnown RBP11.71□□□□□ -0.53
PCSK9-202ENST00000490692 SUPT7LO94864 414 aa11.71□□□□□ -0.53
PCSK9-202ENST00000490692 ATP5BP06576 529 aaKnown RBP11.71□□□□□ -0.53
PCSK9-202ENST00000490692 MMP8P22894 467 aa11.71□□□□□ -0.53
PCSK9-202ENST00000490692 Q3C1V9 767 aa11.71□□□□□ -0.53
PCSK9-202ENST00000490692 TRIM60Q495X7 471 aa11.71□□□□□ -0.53
PCSK9-202ENST00000490692 FGD3Q5JSP0 725 aa11.71□□□□□ -0.53
PCSK9-202ENST00000490692 KCNT2Q6UVM3 1135 aa11.71□□□□□ -0.53
PCSK9-202ENST00000490692 COLGALT1Q8NBJ5 622 aa11.71□□□□□ -0.53
PCSK9-202ENST00000490692 RP9Q8TA86 221 aaKnown RBP11.71□□□□□ -0.53
PCSK9-202ENST00000490692 C20orf27Q9GZN8 174 aa11.71□□□□□ -0.53
PCSK9-202ENST00000490692 C6orf62Q9GZU0 229 aaPredicted RBP11.71□□□□□ -0.53
PCSK9-202ENST00000490692 C1orf21Q9H246 121 aa11.71□□□□□ -0.53
PCSK9-202ENST00000490692 HSFX1Q9UBD0 423 aa11.71□□□□□ -0.53
PCSK9-202ENST00000490692 DKK3Q9UBP4 350 aa11.71□□□□□ -0.53
PCSK9-202ENST00000490692 TJP2Q9UDY2 1190 aa11.71□□□□□ -0.53
PCSK9-202ENST00000490692 SQORQ9Y6N5 450 aa11.71□□□□□ -0.53
PCSK9-202ENST00000490692 EDIL3O43854 480 aa11.71□□□□□ -0.53
PCSK9-202ENST00000490692 BBOX1O75936 387 aa11.71□□□□□ -0.53
PCSK9-202ENST00000490692 ACAT1P24752 427 aaKnown RBP11.71□□□□□ -0.53
PCSK9-202ENST00000490692 KRT76Q01546 638 aa11.71□□□□□ -0.53
PCSK9-202ENST00000490692 SLC18A2Q05940 514 aa11.71□□□□□ -0.53
PCSK9-202ENST00000490692 CCSAPQ6IQ19 270 aaPredicted RBP11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms