RNA–Protein interactions for RNA: ENST00000490035.6

LSAMP-205, Transcript of limbic system associated membrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSAMP, Length 9,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-205ENST00000490035 PDE2AO00408 941 aaPredicted RBP9□□□□□ -0.97
LSAMP-205ENST00000490035 TGDSO95455 350 aa9□□□□□ -0.97
LSAMP-205ENST00000490035 EPB42P16452 691 aa9□□□□□ -0.97
LSAMP-205ENST00000490035 TLX1P31314 330 aaPredicted RBP9□□□□□ -0.97
LSAMP-205ENST00000490035 RPL9P32969 192 aaKnown RBP9□□□□□ -0.97
LSAMP-205ENST00000490035 RTP1P59025 263 aa9□□□□□ -0.97
LSAMP-205ENST00000490035 PCID2Q5JVF3 399 aa9□□□□□ -0.97
LSAMP-205ENST00000490035 HDHD2Q9H0R4 259 aa9□□□□□ -0.97
LSAMP-205ENST00000490035 CCNB1IP1Q9NPC3 277 aa9□□□□□ -0.97
LSAMP-205ENST00000490035 PHGDHO43175 533 aaKnown RBP9□□□□□ -0.97
LSAMP-205ENST00000490035 MICAL2O94851 1124 aa9□□□□□ -0.97
LSAMP-205ENST00000490035 UBOX5O94941 541 aa9□□□□□ -0.97
LSAMP-205ENST00000490035 S100GP29377 79 aa9□□□□□ -0.97
LSAMP-205ENST00000490035 DSG3P32926 999 aa9□□□□□ -0.97
LSAMP-205ENST00000490035 TOB1P50616 345 aaPredicted RBP9□□□□□ -0.97
LSAMP-205ENST00000490035 B3GNT6Q6ZMB0 384 aa9□□□□□ -0.97
LSAMP-205ENST00000490035 PIWIL4Q7Z3Z4 852 aaKnown RBP9□□□□□ -0.97
LSAMP-205ENST00000490035 B3GALNT2Q8NCR0 500 aa9□□□□□ -0.97
LSAMP-205ENST00000490035 PIWIL2Q8TC59 973 aaKnown RBP9□□□□□ -0.97
LSAMP-205ENST00000490035 AENQ8WTP8 325 aaKnown RBP9□□□□□ -0.97
LSAMP-205ENST00000490035 MYDGFQ969H8 173 aa9□□□□□ -0.97
LSAMP-205ENST00000490035 FAXDC2Q96IV6 333 aa9□□□□□ -0.97
LSAMP-205ENST00000490035 ZNF668Q96K58 619 aaPredicted RBP9□□□□□ -0.97
LSAMP-205ENST00000490035 MRPL57Q9BQC6 102 aaKnown RBP9□□□□□ -0.97
LSAMP-205ENST00000490035 CBWD1Q9BRT8 395 aa9□□□□□ -0.97
LSAMP-205ENST00000490035 ZNF670Q9BS34 389 aa9□□□□□ -0.97
LSAMP-205ENST00000490035 RTFDC1Q9BY42 306 aaPredicted RBP9□□□□□ -0.97
LSAMP-205ENST00000490035 DDX43Q9NXZ2 648 aaKnown RBP9□□□□□ -0.97
LSAMP-205ENST00000490035 DERAQ9Y315 318 aa9□□□□□ -0.97
LSAMP-205ENST00000490035 LTN1O94822 1766 aa9□□□□□ -0.97
LSAMP-205ENST00000490035 NRCAMQ92823 1304 aa9□□□□□ -0.97
LSAMP-205ENST00000490035 GLI1P08151 1106 aa8.99□□□□□ -0.97
LSAMP-205ENST00000490035 RARRES1P49788 294 aa8.99□□□□□ -0.97
LSAMP-205ENST00000490035 UBE3AQ05086 875 aa8.99□□□□□ -0.97
LSAMP-205ENST00000490035 BTKQ06187 659 aa8.99□□□□□ -0.97
LSAMP-205ENST00000490035 ZNF75CPQ92670 426 aaPredicted RBP8.99□□□□□ -0.97
LSAMP-205ENST00000490035 FAIM2Q9BWQ8 316 aa8.99□□□□□ -0.97
LSAMP-205ENST00000490035 KLHL25Q9H0H3 589 aa8.99□□□□□ -0.97
LSAMP-205ENST00000490035 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.99□□□□□ -0.97
LSAMP-205ENST00000490035 hCG_2014768A0A024R1R8 64 aa8.99□□□□□ -0.97
LSAMP-205ENST00000490035 A0A096LPK6 155 aa8.99□□□□□ -0.97
LSAMP-205ENST00000490035 FGFR2P21802 821 aa8.99□□□□□ -0.97
LSAMP-205ENST00000490035 BCL2L1Q07817 233 aa8.99□□□□□ -0.97
LSAMP-205ENST00000490035 TMEM62Q0P6H9 643 aa8.99□□□□□ -0.97
LSAMP-205ENST00000490035 FAM228AQ86W67 206 aa8.99□□□□□ -0.97
LSAMP-205ENST00000490035 EPHX4Q8IUS5 362 aa8.99□□□□□ -0.97
LSAMP-205ENST00000490035 CLYBLQ8N0X4 340 aa8.99□□□□□ -0.97
LSAMP-205ENST00000490035 RP9Q8TA86 221 aaKnown RBP8.99□□□□□ -0.97
LSAMP-205ENST00000490035 METTL6Q8TCB7 284 aa8.99□□□□□ -0.97
LSAMP-205ENST00000490035 SLC38A2Q96QD8 506 aa8.99□□□□□ -0.97
LSAMP-205ENST00000490035 FUCA2Q9BTY2 467 aa8.99□□□□□ -0.97
LSAMP-205ENST00000490035 ARHGAP20Q9P2F6 1191 aa8.99□□□□□ -0.97
LSAMP-205ENST00000490035 ATP6V1HQ9UI12 483 aa8.99□□□□□ -0.97
LSAMP-205ENST00000490035 INVSQ9Y283 1065 aa8.99□□□□□ -0.97
LSAMP-205ENST00000490035 H0YC42 278 aa8.99□□□□□ -0.97
LSAMP-205ENST00000490035 SLC28A1O00337 649 aa8.99□□□□□ -0.97
LSAMP-205ENST00000490035 CSPG5O95196 566 aa8.99□□□□□ -0.97
LSAMP-205ENST00000490035 PSMD4P55036 377 aaKnown RBP8.99□□□□□ -0.97
LSAMP-205ENST00000490035 CSHL1Q14406 222 aa8.99□□□□□ -0.97
LSAMP-205ENST00000490035 SKIV2LQ15477 1246 aaKnown RBP8.99□□□□□ -0.97
LSAMP-205ENST00000490035 CCDC149Q6ZUS6 474 aa8.99□□□□□ -0.97
LSAMP-205ENST00000490035 PEX5LQ8IYB4 626 aa8.99□□□□□ -0.97
LSAMP-205ENST00000490035 TCP10LQ8TDR4 215 aa8.99□□□□□ -0.97
LSAMP-205ENST00000490035 STK32AQ8WU08 396 aa8.99□□□□□ -0.97
LSAMP-205ENST00000490035 SPAG4Q9NPE6 437 aa8.99□□□□□ -0.97
LSAMP-205ENST00000490035 MYPNQ86TC9 1320 aa8.99□□□□□ -0.97
LSAMP-205ENST00000490035 CYP3A7-CYP3A51PA0A087WV96 503 aa8.99□□□□□ -0.97
LSAMP-205ENST00000490035 A0A0A0MRY4 1105 aa8.99□□□□□ -0.97
LSAMP-205ENST00000490035 SLC12A8A0AV02 714 aa8.99□□□□□ -0.97
LSAMP-205ENST00000490035 SLC2A4P14672 509 aa8.99□□□□□ -0.97
LSAMP-205ENST00000490035 CYP3A7P24462 503 aa8.99□□□□□ -0.97
LSAMP-205ENST00000490035 TBX2Q13207 712 aaPredicted RBP8.99□□□□□ -0.97
LSAMP-205ENST00000490035 NAA30Q147X3 362 aaPredicted RBP8.99□□□□□ -0.97
LSAMP-205ENST00000490035 ARMC12Q5T9G4 340 aa8.99□□□□□ -0.97
LSAMP-205ENST00000490035 N4BP2L1Q5TBK1 243 aaPredicted RBP8.99□□□□□ -0.97
LSAMP-205ENST00000490035 CYP20A1Q6UW02 462 aa8.99□□□□□ -0.97
LSAMP-205ENST00000490035 KRT77Q7Z794 578 aa8.99□□□□□ -0.97
LSAMP-205ENST00000490035 TLK2Q86UE8 772 aa8.99□□□□□ -0.97
LSAMP-205ENST00000490035 MAP4K3Q8IVH8 894 aa8.99□□□□□ -0.97
LSAMP-205ENST00000490035 REPS2Q8NFH8 660 aa8.99□□□□□ -0.97
LSAMP-205ENST00000490035 PTCD2Q8WV60 388 aaKnown RBP8.99□□□□□ -0.97
LSAMP-205ENST00000490035 SPATA13Q96N96 652 aa8.99□□□□□ -0.97
LSAMP-205ENST00000490035 CNGB3Q9NQW8 809 aa8.99□□□□□ -0.97
LSAMP-205ENST00000490035 TAF6LQ9Y6J9 622 aa8.99□□□□□ -0.97
LSAMP-205ENST00000490035 PARP4Q9UKK3 1724 aaKnown RBP8.99□□□□□ -0.97
LSAMP-205ENST00000490035 GCATO75600 419 aa8.99□□□□□ -0.97
LSAMP-205ENST00000490035 PLEKP08567 350 aaPredicted RBP8.99□□□□□ -0.97
LSAMP-205ENST00000490035 CYP2B6P20813 491 aa8.99□□□□□ -0.97
LSAMP-205ENST00000490035 CLK3P49761 638 aaKnown RBP8.99□□□□□ -0.97
LSAMP-205ENST00000490035 NTRK3Q16288 839 aa8.99□□□□□ -0.97
LSAMP-205ENST00000490035 RFTN2Q52LD8 501 aaPredicted RBP8.99□□□□□ -0.97
LSAMP-205ENST00000490035 MACC1Q6ZN28 852 aa8.99□□□□□ -0.97
LSAMP-205ENST00000490035 BBS4Q96RK4 519 aa8.99□□□□□ -0.97
LSAMP-205ENST00000490035 BBIP1A8MTZ0 92 aa8.99□□□□□ -0.97
LSAMP-205ENST00000490035 CLOCKO15516 846 aa8.99□□□□□ -0.97
LSAMP-205ENST00000490035 NPR3P17342 541 aa8.99□□□□□ -0.97
LSAMP-205ENST00000490035 SPIRE1Q08AE8 756 aa8.99□□□□□ -0.97
LSAMP-205ENST00000490035 C8orf59Q8N0T1 100 aaPredicted RBP8.99□□□□□ -0.97
LSAMP-205ENST00000490035 SYTL5Q8TDW5 730 aaPredicted RBP8.99□□□□□ -0.97
LSAMP-205ENST00000490035 TAS1R2Q8TE23 839 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms