RNA–Protein interactions for RNA: ENST00000489794.1

VPS26A-206, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3 BASIC

Gene VPS26A, Length 928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-206ENST00000489794 XBP1P17861 261 aa6.17□□□□□ -1.42
VPS26A-206ENST00000489794 MMP13P45452 471 aa6.17□□□□□ -1.42
VPS26A-206ENST00000489794 RHAGQ02094 409 aa6.17□□□□□ -1.42
VPS26A-206ENST00000489794 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.17□□□□□ -1.42
VPS26A-206ENST00000489794 TRPC3Q13507 836 aa6.17□□□□□ -1.42
VPS26A-206ENST00000489794 C5orf22Q49AR2 442 aa6.17□□□□□ -1.42
VPS26A-206ENST00000489794 COLEC12Q5KU26 742 aa6.17□□□□□ -1.42
VPS26A-206ENST00000489794 ZNF793Q6ZN11 406 aa6.17□□□□□ -1.42
VPS26A-206ENST00000489794 ZNF575Q86XF7 245 aa6.17□□□□□ -1.42
VPS26A-206ENST00000489794 CPOQ8IVL8 374 aa6.17□□□□□ -1.42
VPS26A-206ENST00000489794 FAM110DQ8TAY7 271 aaPredicted RBP6.17□□□□□ -1.42
VPS26A-206ENST00000489794 COQ8BQ96D53 544 aa6.17□□□□□ -1.42
VPS26A-206ENST00000489794 MAELQ96JY0 434 aaKnown RBP6.17□□□□□ -1.42
VPS26A-206ENST00000489794 FRG2BQ96QU4 278 aa6.17□□□□□ -1.42
VPS26A-206ENST00000489794 TMEM248Q9NWD8 314 aa6.17□□□□□ -1.42
VPS26A-206ENST00000489794 BTBD3Q9Y2F9 522 aa6.17□□□□□ -1.42
VPS26A-206ENST00000489794 ZMYM2Q9UBW7 1377 aa6.17□□□□□ -1.42
VPS26A-206ENST00000489794 HOXC11O43248 304 aaPredicted RBP6.16□□□□□ -1.42
VPS26A-206ENST00000489794 KIF1CO43896 1103 aaKnown RBP6.16□□□□□ -1.42
VPS26A-206ENST00000489794 UGDHO60701 494 aa6.16□□□□□ -1.42
VPS26A-206ENST00000489794 GUCY1B2O75343 617 aa6.16□□□□□ -1.42
VPS26A-206ENST00000489794 WEE2P0C1S8 567 aa6.16□□□□□ -1.42
VPS26A-206ENST00000489794 ARSAP15289 507 aa6.16□□□□□ -1.42
VPS26A-206ENST00000489794 CIITAP33076 1130 aa6.16□□□□□ -1.42
VPS26A-206ENST00000489794 CYP2J2P51589 502 aa6.16□□□□□ -1.42
VPS26A-206ENST00000489794 ARHGAP8P85298 464 aa6.16□□□□□ -1.42
VPS26A-206ENST00000489794 PGM5Q15124 567 aa6.16□□□□□ -1.42
VPS26A-206ENST00000489794 WDR45BQ5MNZ6 344 aa6.16□□□□□ -1.42
VPS26A-206ENST00000489794 C10orf25Q5T742 122 aa6.16□□□□□ -1.42
VPS26A-206ENST00000489794 ATG16L1Q676U5 607 aa6.16□□□□□ -1.42
VPS26A-206ENST00000489794 ZNF626Q68DY1 528 aa6.16□□□□□ -1.42
VPS26A-206ENST00000489794 BRSK2Q8IWQ3 736 aa6.16□□□□□ -1.42
VPS26A-206ENST00000489794 VPS52Q8N1B4 723 aa6.16□□□□□ -1.42
VPS26A-206ENST00000489794 SLC44A5Q8NCS7 719 aa6.16□□□□□ -1.42
VPS26A-206ENST00000489794 CENPIQ92674 756 aaPredicted RBP6.16□□□□□ -1.42
VPS26A-206ENST00000489794 CD180Q99467 661 aa6.16□□□□□ -1.42
VPS26A-206ENST00000489794 TMEM79Q9BSE2 394 aa6.16□□□□□ -1.42
VPS26A-206ENST00000489794 TRMOQ9BU70 441 aa6.16□□□□□ -1.42
VPS26A-206ENST00000489794 HERC2P3Q9BVR0 1158 aa6.16□□□□□ -1.42
VPS26A-206ENST00000489794 NPLQ9BXD5 320 aaPredicted RBP6.16□□□□□ -1.42
VPS26A-206ENST00000489794 CHMP4AQ9BY43 222 aa6.16□□□□□ -1.42
VPS26A-206ENST00000489794 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.16□□□□□ -1.42
VPS26A-206ENST00000489794 WASH6PQ9NQA3 447 aa6.16□□□□□ -1.42
VPS26A-206ENST00000489794 RNF146Q9NTX7 359 aa6.16□□□□□ -1.42
VPS26A-206ENST00000489794 AFG3L2Q9Y4W6 797 aa6.16□□□□□ -1.42
VPS26A-206ENST00000489794 SETD1BQ9UPS6 1966 aaKnown RBP6.15□□□□□ -1.42
VPS26A-206ENST00000489794 RHODO00212 210 aa6.15□□□□□ -1.42
VPS26A-206ENST00000489794 KLK10O43240 276 aa6.15□□□□□ -1.42
VPS26A-206ENST00000489794 STRNO43815 780 aa6.15□□□□□ -1.42
VPS26A-206ENST00000489794 DHX16O60231 1041 aaKnown RBP6.15□□□□□ -1.42
VPS26A-206ENST00000489794 HBP1O60381 514 aa6.15□□□□□ -1.42
VPS26A-206ENST00000489794 FGBP02675 491 aa6.15□□□□□ -1.42
VPS26A-206ENST00000489794 IFIT1P09914 478 aaKnown RBP6.15□□□□□ -1.42
VPS26A-206ENST00000489794 PSMC2P35998 433 aaKnown RBP6.15□□□□□ -1.42
VPS26A-206ENST00000489794 GJC1P36383 396 aa6.15□□□□□ -1.42
VPS26A-206ENST00000489794 GPD2P43304 727 aa6.15□□□□□ -1.42
VPS26A-206ENST00000489794 PLCD1P51178 756 aa6.15□□□□□ -1.42
VPS26A-206ENST00000489794 BYSLQ13895 437 aaKnown RBP6.15□□□□□ -1.42
VPS26A-206ENST00000489794 ALG10Q5BKT4 473 aa6.15□□□□□ -1.42
VPS26A-206ENST00000489794 ARL13AQ5H913 290 aaPredicted RBP6.15□□□□□ -1.42
VPS26A-206ENST00000489794 ALG10BQ5I7T1 473 aa6.15□□□□□ -1.42
VPS26A-206ENST00000489794 PXDC1Q5TGL8 231 aa6.15□□□□□ -1.42
VPS26A-206ENST00000489794 FAM171A1Q5VUB5 890 aa6.15□□□□□ -1.42
VPS26A-206ENST00000489794 MRPL10Q7Z7H8 261 aaKnown RBP6.15□□□□□ -1.42
VPS26A-206ENST00000489794 DDIASQ8IXT1 998 aa6.15□□□□□ -1.42
VPS26A-206ENST00000489794 FAM185AQ8N0U4 392 aa6.15□□□□□ -1.42
VPS26A-206ENST00000489794 C16orf52Q8NHV5 167 aa6.15□□□□□ -1.42
VPS26A-206ENST00000489794 DENND1AQ8TEH3 1009 aa6.15□□□□□ -1.42
VPS26A-206ENST00000489794 RPL36ALQ969Q0 106 aaKnown RBP6.15□□□□□ -1.42
VPS26A-206ENST00000489794 IFT27Q9BW83 186 aa6.15□□□□□ -1.42
VPS26A-206ENST00000489794 SCNM1Q9BWG6 230 aa6.15□□□□□ -1.42
VPS26A-206ENST00000489794 TMEM160Q9NX00 188 aa6.15□□□□□ -1.42
VPS26A-206ENST00000489794 FBXO40Q9UH90 709 aa6.15□□□□□ -1.42
VPS26A-206ENST00000489794 LAMP3Q9UQV4 416 aa6.15□□□□□ -1.42
VPS26A-206ENST00000489794 TRBV5-3A0A0A0MS03 114 aa6.14□□□□□ -1.43
VPS26A-206ENST00000489794 FOXO6A8MYZ6 492 aa6.14□□□□□ -1.43
VPS26A-206ENST00000489794 PEX12O00623 359 aa6.14□□□□□ -1.43
VPS26A-206ENST00000489794 TLX3O43711 291 aaPredicted RBP6.14□□□□□ -1.43
VPS26A-206ENST00000489794 TYK2P29597 1187 aa6.14□□□□□ -1.43
VPS26A-206ENST00000489794 AVPR2P30518 371 aa6.14□□□□□ -1.43
VPS26A-206ENST00000489794 SKIV2L2P42285 1042 aaKnown RBP6.14□□□□□ -1.43
VPS26A-206ENST00000489794 CCR5P51681 352 aa6.14□□□□□ -1.43
VPS26A-206ENST00000489794 POU5F1BQ06416 359 aa6.14□□□□□ -1.43
VPS26A-206ENST00000489794 MIDNQ504T8 468 aa6.14□□□□□ -1.43
VPS26A-206ENST00000489794 SLC2A7Q6PXP3 512 aa6.14□□□□□ -1.43
VPS26A-206ENST00000489794 MMS22LQ6ZRQ5 1243 aa6.14□□□□□ -1.43
VPS26A-206ENST00000489794 LRRC8DQ7L1W4 858 aa6.14□□□□□ -1.43
VPS26A-206ENST00000489794 C2CD4CQ8TF44 421 aa6.14□□□□□ -1.43
VPS26A-206ENST00000489794 ZFYVE19Q96K21 471 aa6.14□□□□□ -1.43
VPS26A-206ENST00000489794 TEFMQ96QE5 360 aaKnown RBP6.14□□□□□ -1.43
VPS26A-206ENST00000489794 WDR83Q9BRX9 315 aaKnown RBP6.14□□□□□ -1.43
VPS26A-206ENST00000489794 GPR63Q9BZJ6 419 aa6.14□□□□□ -1.43
VPS26A-206ENST00000489794 TAOK3Q9H2K8 898 aa6.14□□□□□ -1.43
VPS26A-206ENST00000489794 STN1Q9H668 368 aaKnown RBP6.14□□□□□ -1.43
VPS26A-206ENST00000489794 TASP1Q9H6P5 420 aa6.14□□□□□ -1.43
VPS26A-206ENST00000489794 Q9N2J8 555 aa6.14□□□□□ -1.43
VPS26A-206ENST00000489794 TMEM184CQ9NVA4 438 aa6.14□□□□□ -1.43
VPS26A-206ENST00000489794 DHDHQ9UQ10 334 aa6.14□□□□□ -1.43
VPS26A-206ENST00000489794 A0A1B0GVC2 190 aa6.13□□□□□ -1.43
VPS26A-206ENST00000489794 CXorf65A6NEN9 183 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms