RNA–Protein interactions for RNA: ENST00000489728.1

CPSF7-212, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-212ENST00000489728 CREB3O43889 395 aa11.36□□□□□ -0.59
CPSF7-212ENST00000489728 RAMP2O60895 175 aa11.36□□□□□ -0.59
CPSF7-212ENST00000489728 KRT7P08729 469 aa11.36□□□□□ -0.59
CPSF7-212ENST00000489728 PRKCHP24723 683 aa11.36□□□□□ -0.59
CPSF7-212ENST00000489728 MZF1P28698 734 aaPredicted RBP11.36□□□□□ -0.59
CPSF7-212ENST00000489728 ARL4AP40617 200 aa11.36□□□□□ -0.59
CPSF7-212ENST00000489728 NDST2P52849 883 aa11.36□□□□□ -0.59
CPSF7-212ENST00000489728 ZBTB16Q05516 673 aa11.36□□□□□ -0.59
CPSF7-212ENST00000489728 SLC20A2Q08357 652 aa11.36□□□□□ -0.59
CPSF7-212ENST00000489728 HNRNPA1L2Q32P51 320 aaKnown RBP11.36□□□□□ -0.59
CPSF7-212ENST00000489728 PARP15Q460N3 678 aa11.36□□□□□ -0.59
CPSF7-212ENST00000489728 LRRC38Q5VT99 294 aa11.36□□□□□ -0.59
CPSF7-212ENST00000489728 RETSATQ6NUM9 610 aa11.36□□□□□ -0.59
CPSF7-212ENST00000489728 TSSK4Q6SA08 328 aa11.36□□□□□ -0.59
CPSF7-212ENST00000489728 RFX8Q6ZV50 586 aa11.36□□□□□ -0.59
CPSF7-212ENST00000489728 VSIG1Q86XK7 387 aa11.36□□□□□ -0.59
CPSF7-212ENST00000489728 UMODL1-AS1Q8N2C9 162 aa11.36□□□□□ -0.59
CPSF7-212ENST00000489728 PYROXD2Q8N2H3 581 aa11.36□□□□□ -0.59
CPSF7-212ENST00000489728 SPC24Q8NBT2 197 aa11.36□□□□□ -0.59
CPSF7-212ENST00000489728 MDGA1Q8NFP4 955 aa11.36□□□□□ -0.59
CPSF7-212ENST00000489728 OR52K2Q8NGK3 314 aa11.36□□□□□ -0.59
CPSF7-212ENST00000489728 FAM71BQ8TC56 605 aa11.36□□□□□ -0.59
CPSF7-212ENST00000489728 SORCS1Q8WY21 1168 aa11.36□□□□□ -0.59
CPSF7-212ENST00000489728 MYO19Q96H55 970 aa11.36□□□□□ -0.59
CPSF7-212ENST00000489728 EPC1Q9H2F5 836 aa11.36□□□□□ -0.59
CPSF7-212ENST00000489728 DHX35Q9H5Z1 703 aaKnown RBP11.36□□□□□ -0.59
CPSF7-212ENST00000489728 ZWILCHQ9H900 591 aa11.36□□□□□ -0.59
CPSF7-212ENST00000489728 OSGEPQ9NPF4 335 aa11.36□□□□□ -0.59
CPSF7-212ENST00000489728 PCSK1NQ9UHG2 260 aa11.36□□□□□ -0.59
CPSF7-212ENST00000489728 PLXND1Q9Y4D7 1925 aa11.36□□□□□ -0.59
CPSF7-212ENST00000489728 EDDM13A0A1B0GTR0 161 aa11.35□□□□□ -0.59
CPSF7-212ENST00000489728 ANTXRLA6NF34 631 aa11.35□□□□□ -0.59
CPSF7-212ENST00000489728 ATP9BO43861 1147 aa11.35□□□□□ -0.59
CPSF7-212ENST00000489728 ZNF217O75362 1048 aa11.35□□□□□ -0.59
CPSF7-212ENST00000489728 EPHX1P07099 455 aa11.35□□□□□ -0.59
CPSF7-212ENST00000489728 IL1R2P27930 398 aa11.35□□□□□ -0.59
CPSF7-212ENST00000489728 FNTBP49356 437 aa11.35□□□□□ -0.59
CPSF7-212ENST00000489728 PDK2Q15119 407 aa11.35□□□□□ -0.59
CPSF7-212ENST00000489728 USP39Q53GS9 565 aaKnown RBP11.35□□□□□ -0.59
CPSF7-212ENST00000489728 ANO7Q6IWH7 933 aa11.35□□□□□ -0.59
CPSF7-212ENST00000489728 LZTR1Q8N653 840 aa11.35□□□□□ -0.59
CPSF7-212ENST00000489728 OR2T3Q8NH03 318 aa11.35□□□□□ -0.59
CPSF7-212ENST00000489728 CYB5D2Q8WUJ1 264 aa11.35□□□□□ -0.59
CPSF7-212ENST00000489728 GAB3Q8WWW8 586 aa11.35□□□□□ -0.59
CPSF7-212ENST00000489728 CASKIN2Q8WXE0 1202 aa11.35□□□□□ -0.59
CPSF7-212ENST00000489728 BTBD6Q96KE9 485 aa11.35□□□□□ -0.59
CPSF7-212ENST00000489728 SPACA7Q96KW9 195 aa11.35□□□□□ -0.59
CPSF7-212ENST00000489728 KCTD15Q96SI1 283 aaPredicted RBP11.35□□□□□ -0.59
CPSF7-212ENST00000489728 PSMB7Q99436 277 aa11.35□□□□□ -0.59
CPSF7-212ENST00000489728 ACE2Q9BYF1 805 aaPredicted RBP11.35□□□□□ -0.59
CPSF7-212ENST00000489728 CEP44Q9C0F1 390 aa11.35□□□□□ -0.59
CPSF7-212ENST00000489728 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.35□□□□□ -0.59
CPSF7-212ENST00000489728 BCCIPQ9P287 314 aaKnown RBP eCLIP11.35□□□□□ -0.59
CPSF7-212ENST00000489728 VPS51Q9UID3 782 aa11.35□□□□□ -0.59
CPSF7-212ENST00000489728 HPCAL4Q9UM19 191 aa11.35□□□□□ -0.59
CPSF7-212ENST00000489728 SCML1Q9UN30 329 aa11.35□□□□□ -0.59
CPSF7-212ENST00000489728 ATG2BQ96BY7 2078 aa11.35□□□□□ -0.59
CPSF7-212ENST00000489728 A0A0D9SEW6 157 aa11.34□□□□□ -0.59
CPSF7-212ENST00000489728 WASH3PC4AMC7 463 aa11.34□□□□□ -0.59
CPSF7-212ENST00000489728 ALOX15BO15296 676 aa11.34□□□□□ -0.59
CPSF7-212ENST00000489728 PJA2O43164 708 aa11.34□□□□□ -0.59
CPSF7-212ENST00000489728 DAPK3O43293 454 aa11.34□□□□□ -0.59
CPSF7-212ENST00000489728 NRDCO43847 1150 aa11.34□□□□□ -0.59
CPSF7-212ENST00000489728 RPP40O75818 363 aaKnown RBP11.34□□□□□ -0.59
CPSF7-212ENST00000489728 RARAP10276 462 aa11.34□□□□□ -0.59
CPSF7-212ENST00000489728 GABRG2P18507 467 aa11.34□□□□□ -0.59
CPSF7-212ENST00000489728 WASP42768 502 aa11.34□□□□□ -0.59
CPSF7-212ENST00000489728 MRE11P49959 708 aa11.34□□□□□ -0.59
CPSF7-212ENST00000489728 VAV2P52735 878 aa11.34□□□□□ -0.59
CPSF7-212ENST00000489728 DMWDQ09019 674 aa11.34□□□□□ -0.59
CPSF7-212ENST00000489728 SFSWAPQ12872 951 aaKnown RBP11.34□□□□□ -0.59
CPSF7-212ENST00000489728 DPYSQ14117 519 aa11.34□□□□□ -0.59
CPSF7-212ENST00000489728 ELAVL3Q14576 367 aaKnown RBP11.34□□□□□ -0.59
CPSF7-212ENST00000489728 POLD3Q15054 466 aaPredicted RBP11.34□□□□□ -0.59
CPSF7-212ENST00000489728 CA9Q16790 459 aa11.34□□□□□ -0.59
CPSF7-212ENST00000489728 PPP6R3Q5H9R7 873 aaPredicted RBP11.34□□□□□ -0.59
CPSF7-212ENST00000489728 C11orf63Q6NUN7 778 aa11.34□□□□□ -0.59
CPSF7-212ENST00000489728 KIAA1211LQ6NV74 962 aa11.34□□□□□ -0.59
CPSF7-212ENST00000489728 RAD9BQ6WBX8 426 aa11.34□□□□□ -0.59
CPSF7-212ENST00000489728 MAP7D3Q8IWC1 876 aa11.34□□□□□ -0.59
CPSF7-212ENST00000489728 SH2D3CQ8N5H7 860 aa11.34□□□□□ -0.59
CPSF7-212ENST00000489728 HMGB4Q8WW32 186 aa11.34□□□□□ -0.59
CPSF7-212ENST00000489728 TSC1Q92574 1164 aa11.34□□□□□ -0.59
CPSF7-212ENST00000489728 HSPH1Q92598 858 aa11.34□□□□□ -0.59
CPSF7-212ENST00000489728 ARHGEF2Q92974 986 aaKnown RBP11.34□□□□□ -0.59
CPSF7-212ENST00000489728 ISG20Q96AZ6 181 aaKnown RBP11.34□□□□□ -0.59
CPSF7-212ENST00000489728 MRGPRX1Q96LB2 322 aa11.34□□□□□ -0.59
CPSF7-212ENST00000489728 CCDC114Q96M63 670 aa11.34□□□□□ -0.59
CPSF7-212ENST00000489728 ZNF670Q9BS34 389 aa11.34□□□□□ -0.59
CPSF7-212ENST00000489728 PRDM16Q9HAZ2 1276 aa11.34□□□□□ -0.59
CPSF7-212ENST00000489728 ATP13A1Q9HD20 1204 aa11.34□□□□□ -0.59
CPSF7-212ENST00000489728 ZDHHC4Q9NPG8 344 aa11.34□□□□□ -0.59
CPSF7-212ENST00000489728 GPATCH2LQ9NWQ4 482 aa11.34□□□□□ -0.59
CPSF7-212ENST00000489728 NYNRINQ9P2P1 1898 aaKnown RBP11.34□□□□□ -0.59
CPSF7-212ENST00000489728 ARHGAP6O43182 974 aa11.33□□□□□ -0.6
CPSF7-212ENST00000489728 KDELR3O43731 214 aa11.33□□□□□ -0.6
CPSF7-212ENST00000489728 RNASEH1O60930 286 aaKnown RBP11.33□□□□□ -0.6
CPSF7-212ENST00000489728 ZMPSTE24O75844 475 aa11.33□□□□□ -0.6
CPSF7-212ENST00000489728 IGLV3-19P01714 112 aa11.33□□□□□ -0.6
CPSF7-212ENST00000489728 TCF4P15884 667 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms