RNA–Protein interactions for RNA: ENST00000489581.1

TOP3B-217, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 789 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-217ENST00000489581 FGF11Q92914 225 aa17.49■□□□□ 0.39
TOP3B-217ENST00000489581 GSDMAQ96QA5 445 aa17.49■□□□□ 0.39
TOP3B-217ENST00000489581 SPAG5Q96R06 1193 aa17.49■□□□□ 0.39
TOP3B-217ENST00000489581 CLCA2Q9UQC9 943 aa17.49■□□□□ 0.39
TOP3B-217ENST00000489581 PMM2O15305 246 aa17.48■□□□□ 0.39
TOP3B-217ENST00000489581 PLRG1O43660 514 aaKnown RBP17.48■□□□□ 0.39
TOP3B-217ENST00000489581 MAGEC1O60732 1142 aa17.48■□□□□ 0.39
TOP3B-217ENST00000489581 INSM1Q01101 510 aaPredicted RBP17.48■□□□□ 0.39
TOP3B-217ENST00000489581 SULT2A1Q06520 285 aa17.48■□□□□ 0.39
TOP3B-217ENST00000489581 CCDC173Q0VFZ6 552 aa17.48■□□□□ 0.39
TOP3B-217ENST00000489581 KDM7AQ6ZMT4 941 aa17.48■□□□□ 0.39
TOP3B-217ENST00000489581 IQCHQ86VS3 1027 aa17.48■□□□□ 0.39
TOP3B-217ENST00000489581 FMR1NBQ8N0W7 255 aaPredicted RBP17.48■□□□□ 0.39
TOP3B-217ENST00000489581 ATP6V0D2Q8N8Y2 350 aa17.48■□□□□ 0.39
TOP3B-217ENST00000489581 OR8D1Q8WZ84 308 aa17.48■□□□□ 0.39
TOP3B-217ENST00000489581 FAM131CQ96AQ9 280 aa17.48■□□□□ 0.39
TOP3B-217ENST00000489581 KDM4CQ9H3R0 1056 aa17.48■□□□□ 0.39
TOP3B-217ENST00000489581 TRPM6Q9BX84 2022 aa17.48■□□□□ 0.39
TOP3B-217ENST00000489581 MGAQ8IWI9 3026 aa17.47■□□□□ 0.39
TOP3B-217ENST00000489581 KALRNO60229 2985 aa17.47■□□□□ 0.39
TOP3B-217ENST00000489581 KCNU1A8MYU2 1149 aa17.47■□□□□ 0.39
TOP3B-217ENST00000489581 TRIM38O00635 465 aa17.47■□□□□ 0.39
TOP3B-217ENST00000489581 SLC7A4O43246 635 aa17.47■□□□□ 0.39
TOP3B-217ENST00000489581 SIGLEC6O43699 453 aa17.47■□□□□ 0.39
TOP3B-217ENST00000489581 ACP1P24666 158 aa17.47■□□□□ 0.39
TOP3B-217ENST00000489581 PLK1P53350 603 aa17.47■□□□□ 0.39
TOP3B-217ENST00000489581 CETN1Q12798 172 aa17.47■□□□□ 0.39
TOP3B-217ENST00000489581 CNTN1Q12860 1018 aa17.47■□□□□ 0.39
TOP3B-217ENST00000489581 OVGP1Q12889 678 aa17.47■□□□□ 0.39
TOP3B-217ENST00000489581 PROX2Q3B8N5 592 aa17.47■□□□□ 0.39
TOP3B-217ENST00000489581 AGBL4Q5VU57 503 aa17.47■□□□□ 0.39
TOP3B-217ENST00000489581 FAM46CQ5VWP2 391 aa17.47■□□□□ 0.39
TOP3B-217ENST00000489581 ISM2Q6H9L7 571 aa17.47■□□□□ 0.39
TOP3B-217ENST00000489581 BEND5Q7L4P6 421 aa17.47■□□□□ 0.39
TOP3B-217ENST00000489581 DSG4Q86SJ6 1040 aa17.47■□□□□ 0.39
TOP3B-217ENST00000489581 RFFLQ8WZ73 363 aa17.47■□□□□ 0.39
TOP3B-217ENST00000489581 SMARCE1Q969G3 411 aa17.47■□□□□ 0.39
TOP3B-217ENST00000489581 KREMEN1Q96MU8 473 aa17.47■□□□□ 0.39
TOP3B-217ENST00000489581 PRMT1Q99873 361 aaKnown RBP17.47■□□□□ 0.39
TOP3B-217ENST00000489581 SLC4A5Q9BY07 1137 aa17.47■□□□□ 0.39
TOP3B-217ENST00000489581 POPDC2Q9HBU9 364 aa17.47■□□□□ 0.39
TOP3B-217ENST00000489581 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.47■□□□□ 0.39
TOP3B-217ENST00000489581 SLC12A6Q9UHW9 1150 aa17.47■□□□□ 0.39
TOP3B-217ENST00000489581 DMTF1Q9Y222 760 aa17.47■□□□□ 0.39
TOP3B-217ENST00000489581 ATP6V1DQ9Y5K8 247 aa17.47■□□□□ 0.39
TOP3B-217ENST00000489581 SYNJ2BP-COX16A0A087WUM0 186 aa17.46■□□□□ 0.39
TOP3B-217ENST00000489581 A0A1B0GVM2 712 aa17.46■□□□□ 0.39
TOP3B-217ENST00000489581 TCAF2A6NFQ2 919 aa17.46■□□□□ 0.39
TOP3B-217ENST00000489581 E5RJQ4 531 aa17.46■□□□□ 0.39
TOP3B-217ENST00000489581 BNIP3LO60238 219 aa17.46■□□□□ 0.39
TOP3B-217ENST00000489581 SMC2O95347 1197 aa17.46■□□□□ 0.39
TOP3B-217ENST00000489581 MT-CO3P00414 261 aa17.46■□□□□ 0.39
TOP3B-217ENST00000489581 IGLV3-25P01717 112 aa17.46■□□□□ 0.39
TOP3B-217ENST00000489581 KRT5P13647 590 aa17.46■□□□□ 0.39
TOP3B-217ENST00000489581 ZNF18P17022 549 aa17.46■□□□□ 0.39
TOP3B-217ENST00000489581 ACTN2P35609 894 aa17.46■□□□□ 0.39
TOP3B-217ENST00000489581 NUDT1P36639 197 aa17.46■□□□□ 0.39
TOP3B-217ENST00000489581 YWHAZP63104 245 aaKnown RBP17.46■□□□□ 0.39
TOP3B-217ENST00000489581 GCNT1Q02742 428 aa17.46■□□□□ 0.39
TOP3B-217ENST00000489581 TAF5Q15542 800 aa17.46■□□□□ 0.39
TOP3B-217ENST00000489581 DLG2Q15700 870 aa17.46■□□□□ 0.39
TOP3B-217ENST00000489581 CXorf57Q6NSI4 855 aaKnown RBP17.46■□□□□ 0.39
TOP3B-217ENST00000489581 GPR155Q7Z3F1 870 aa17.46■□□□□ 0.39
TOP3B-217ENST00000489581 TRIM69Q86WT6 500 aa17.46■□□□□ 0.39
TOP3B-217ENST00000489581 CACTIN-AS1Q8N1I8 211 aa17.46■□□□□ 0.39
TOP3B-217ENST00000489581 SLC25A45Q8N413 288 aa17.46■□□□□ 0.39
TOP3B-217ENST00000489581 DCBLD1Q8N8Z6 715 aa17.46■□□□□ 0.39
TOP3B-217ENST00000489581 EHBP1Q8NDI1 1231 aa17.46■□□□□ 0.39
TOP3B-217ENST00000489581 OR52K2Q8NGK3 314 aa17.46■□□□□ 0.39
TOP3B-217ENST00000489581 KLK6Q92876 244 aa17.46■□□□□ 0.39
TOP3B-217ENST00000489581 KLHDC7BQ96G42 594 aa17.46■□□□□ 0.39
TOP3B-217ENST00000489581 CEP63Q96MT8 703 aa17.46■□□□□ 0.39
TOP3B-217ENST00000489581 MYOCQ99972 504 aa17.46■□□□□ 0.39
TOP3B-217ENST00000489581 TRIM62Q9BVG3 475 aa17.46■□□□□ 0.39
TOP3B-217ENST00000489581 COX16Q9P0S2 106 aa17.46■□□□□ 0.39
TOP3B-217ENST00000489581 SLC25A13Q9UJS0 675 aa17.46■□□□□ 0.39
TOP3B-217ENST00000489581 PPM1HQ9ULR3 514 aa17.46■□□□□ 0.39
TOP3B-217ENST00000489581 COL6A6A6NMZ7 2263 aa17.46■□□□□ 0.39
TOP3B-217ENST00000489581 PRAMEF26H0Y7S4 382 aa17.45■□□□□ 0.38
TOP3B-217ENST00000489581 PSMA7O14818 248 aa17.45■□□□□ 0.38
TOP3B-217ENST00000489581 SLC31A1O15431 190 aa17.45■□□□□ 0.38
TOP3B-217ENST00000489581 ATP9BO43861 1147 aa17.45■□□□□ 0.38
TOP3B-217ENST00000489581 LETM1O95202 739 aaPredicted RBP17.45■□□□□ 0.38
TOP3B-217ENST00000489581 DAB2P98082 770 aa17.45■□□□□ 0.38
TOP3B-217ENST00000489581 E2F1Q01094 437 aa17.45■□□□□ 0.38
TOP3B-217ENST00000489581 CENPCQ03188 943 aa17.45■□□□□ 0.38
TOP3B-217ENST00000489581 TLE3Q04726 772 aa17.45■□□□□ 0.38
TOP3B-217ENST00000489581 EIF4EBP2Q13542 120 aaPredicted RBP17.45■□□□□ 0.38
TOP3B-217ENST00000489581 TBC1D25Q3MII6 688 aa17.45■□□□□ 0.38
TOP3B-217ENST00000489581 SETMARQ53H47 684 aaPredicted RBP17.45■□□□□ 0.38
TOP3B-217ENST00000489581 RABGAP1LQ5R372 815 aa17.45■□□□□ 0.38
TOP3B-217ENST00000489581 Q6ZVU0 165 aa17.45■□□□□ 0.38
TOP3B-217ENST00000489581 TMEM110Q86TL2 294 aa17.45■□□□□ 0.38
TOP3B-217ENST00000489581 ERICH1Q86X53 443 aa17.45■□□□□ 0.38
TOP3B-217ENST00000489581 SPACA3Q8IXA5 215 aa17.45■□□□□ 0.38
TOP3B-217ENST00000489581 SPATA20Q8TB22 786 aa17.45■□□□□ 0.38
TOP3B-217ENST00000489581 STK32AQ8WU08 396 aa17.45■□□□□ 0.38
TOP3B-217ENST00000489581 RNF34Q969K3 372 aa17.45■□□□□ 0.38
TOP3B-217ENST00000489581 ALG14Q96F25 216 aa17.45■□□□□ 0.38
TOP3B-217ENST00000489581 NAF1Q96HR8 494 aaKnown RBP17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms