RNA–Protein interactions for RNA: ENST00000489573.5

SMC4-221, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 1 (best)

Gene SMC4, Length 1,553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-221ENST00000489573 CPXM2Q8N436 756 aa22.16■■□□□ 1.14
SMC4-221ENST00000489573 ZCCHC9Q8N567 271 aaKnown RBP22.16■■□□□ 1.14
SMC4-221ENST00000489573 NAT8LQ8N9F0 302 aa22.16■■□□□ 1.14
SMC4-221ENST00000489573 ING5Q8WYH8 240 aa22.16■■□□□ 1.14
SMC4-221ENST00000489573 USP13Q92995 863 aaPredicted RBP22.16■■□□□ 1.14
SMC4-221ENST00000489573 CEP41Q9BYV8 373 aa22.16■■□□□ 1.14
SMC4-221ENST00000489573 TSPYL1Q9H0U9 437 aa22.16■■□□□ 1.14
SMC4-221ENST00000489573 KLHL8Q9P2G9 620 aaPredicted RBP22.16■■□□□ 1.14
SMC4-221ENST00000489573 CCL26Q9Y258 94 aa22.16■■□□□ 1.14
SMC4-221ENST00000489573 DOCK6Q96HP0 2047 aa22.16■■□□□ 1.14
SMC4-221ENST00000489573 E2F8A0AVK6 867 aa22.16■■□□□ 1.14
SMC4-221ENST00000489573 TYW5A2RUC4 315 aaKnown RBP22.16■■□□□ 1.14
SMC4-221ENST00000489573 CHADO15335 359 aa22.16■■□□□ 1.14
SMC4-221ENST00000489573 PPFIA2O75334 1257 aa22.16■■□□□ 1.14
SMC4-221ENST00000489573 METTL18O95568 372 aa22.16■■□□□ 1.14
SMC4-221ENST00000489573 GLP2RO95838 553 aa22.16■■□□□ 1.14
SMC4-221ENST00000489573 CHKAP35790 457 aa22.16■■□□□ 1.14
SMC4-221ENST00000489573 KCNJ11Q14654 390 aa22.16■■□□□ 1.14
SMC4-221ENST00000489573 POLD3Q15054 466 aaPredicted RBP22.16■■□□□ 1.14
SMC4-221ENST00000489573 FAXCQ5TGI0 409 aa22.16■■□□□ 1.14
SMC4-221ENST00000489573 ANKRD22Q5VYY1 191 aa22.16■■□□□ 1.14
SMC4-221ENST00000489573 BBS7Q8IWZ6 715 aa22.16■■□□□ 1.14
SMC4-221ENST00000489573 EFHBQ8N7U6 833 aa22.16■■□□□ 1.14
SMC4-221ENST00000489573 ETNK1Q9HBU6 452 aa22.16■■□□□ 1.14
SMC4-221ENST00000489573 TDP1Q9NUW8 608 aa22.16■■□□□ 1.14
SMC4-221ENST00000489573 IPO11Q9UI26 975 aaKnown RBP22.16■■□□□ 1.14
SMC4-221ENST00000489573 TRHDEQ9UKU6 1024 aa22.16■■□□□ 1.14
SMC4-221ENST00000489573 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP22.15■■□□□ 1.14
SMC4-221ENST00000489573 MATN3O15232 486 aa22.15■■□□□ 1.14
SMC4-221ENST00000489573 FDFT1P37268 417 aa22.15■■□□□ 1.14
SMC4-221ENST00000489573 IFI35P80217 286 aaPredicted RBP22.15■■□□□ 1.14
SMC4-221ENST00000489573 ZBTB17Q13105 803 aa22.15■■□□□ 1.14
SMC4-221ENST00000489573 ZNF177Q13360 481 aaPredicted RBP22.15■■□□□ 1.14
SMC4-221ENST00000489573 SLMAPQ14BN4 828 aa22.15■■□□□ 1.14
SMC4-221ENST00000489573 TEX44Q53QW1 395 aa22.15■■□□□ 1.14
SMC4-221ENST00000489573 C6orf118Q5T5N4 469 aa22.15■■□□□ 1.14
SMC4-221ENST00000489573 CCDC25Q86WR0 208 aa22.15■■□□□ 1.14
SMC4-221ENST00000489573 TSEN2Q8NCE0 465 aaKnown RBP22.15■■□□□ 1.14
SMC4-221ENST00000489573 ITFG1Q8TB96 612 aa22.15■■□□□ 1.14
SMC4-221ENST00000489573 TXLNGYQ9BZA5 131 aa22.15■■□□□ 1.14
SMC4-221ENST00000489573 MAP2K7O14733 419 aa22.14■■□□□ 1.13
SMC4-221ENST00000489573 TBL1XO60907 577 aa22.14■■□□□ 1.13
SMC4-221ENST00000489573 PRAMEF12O95522 483 aa22.14■■□□□ 1.13
SMC4-221ENST00000489573 MAGEA6P43360 314 aa22.14■■□□□ 1.13
SMC4-221ENST00000489573 ANO4Q32M45 955 aa22.14■■□□□ 1.13
SMC4-221ENST00000489573 CEP128Q6ZU80 1094 aa22.14■■□□□ 1.13
SMC4-221ENST00000489573 PID1Q7Z2X4 250 aa22.14■■□□□ 1.13
SMC4-221ENST00000489573 SETD3Q86TU7 594 aaPredicted RBP22.14■■□□□ 1.13
SMC4-221ENST00000489573 ZNF354CQ86Y25 554 aa22.14■■□□□ 1.13
SMC4-221ENST00000489573 FATE1Q969F0 183 aa22.14■■□□□ 1.13
SMC4-221ENST00000489573 EXOC4Q96A65 974 aa22.14■■□□□ 1.13
SMC4-221ENST00000489573 TMA16Q96EY4 203 aaKnown RBP22.14■■□□□ 1.13
SMC4-221ENST00000489573 ZSWIM3Q96MP5 696 aa22.14■■□□□ 1.13
SMC4-221ENST00000489573 MAGEH1Q9H213 219 aa22.14■■□□□ 1.13
SMC4-221ENST00000489573 IGSF9Q9P2J2 1179 aa22.14■■□□□ 1.13
SMC4-221ENST00000489573 ATP8A1Q9Y2Q0 1164 aa22.14■■□□□ 1.13
SMC4-221ENST00000489573 TRIOBPQ9H2D6 2365 aa22.14■■□□□ 1.13
SMC4-221ENST00000489573 TCRBV7S3A2A0A539 114 aa22.13■■□□□ 1.13
SMC4-221ENST00000489573 LINC01565O15544 149 aa22.13■■□□□ 1.13
SMC4-221ENST00000489573 SASH3O75995 380 aa22.13■■□□□ 1.13
SMC4-221ENST00000489573 TMEM63AO94886 807 aa22.13■■□□□ 1.13
SMC4-221ENST00000489573 JCHAINP01591 159 aa22.13■■□□□ 1.13
SMC4-221ENST00000489573 RHOCP08134 193 aa22.13■■□□□ 1.13
SMC4-221ENST00000489573 CCNB1P14635 433 aa22.13■■□□□ 1.13
SMC4-221ENST00000489573 TCF3P15923 654 aa22.13■■□□□ 1.13
SMC4-221ENST00000489573 GNA12Q03113 381 aa22.13■■□□□ 1.13
SMC4-221ENST00000489573 USP4Q13107 963 aa22.13■■□□□ 1.13
SMC4-221ENST00000489573 SERINC3Q13530 473 aa22.13■■□□□ 1.13
SMC4-221ENST00000489573 SEMA5AQ13591 1074 aa22.13■■□□□ 1.13
SMC4-221ENST00000489573 PARP6Q2NL67 630 aa22.13■■□□□ 1.13
SMC4-221ENST00000489573 ITPRIPL1Q6GPH6 555 aa22.13■■□□□ 1.13
SMC4-221ENST00000489573 ANKRD54Q6NXT1 300 aa22.13■■□□□ 1.13
SMC4-221ENST00000489573 GPR149Q86SP6 731 aa22.13■■□□□ 1.13
SMC4-221ENST00000489573 TDRD5Q8NAT2 981 aaKnown RBP22.13■■□□□ 1.13
SMC4-221ENST00000489573 ZSCAN18Q8TBC5 510 aaPredicted RBP22.13■■□□□ 1.13
SMC4-221ENST00000489573 PWWP2AQ96N64 755 aa22.13■■□□□ 1.13
SMC4-221ENST00000489573 SP110Q9HB58 689 aa22.13■■□□□ 1.13
SMC4-221ENST00000489573 TBC1D30Q9Y2I9 924 aa22.13■■□□□ 1.13
SMC4-221ENST00000489573 NUP205Q92621 2012 aa22.13■■□□□ 1.13
SMC4-221ENST00000489573 NYNRINQ9P2P1 1898 aaKnown RBP22.13■■□□□ 1.13
SMC4-221ENST00000489573 PSMB4P28070 264 aa22.12■■□□□ 1.13
SMC4-221ENST00000489573 ACVRL1P37023 503 aa22.12■■□□□ 1.13
SMC4-221ENST00000489573 PMS2P54278 862 aa22.12■■□□□ 1.13
SMC4-221ENST00000489573 ZNF77Q15935 545 aa22.12■■□□□ 1.13
SMC4-221ENST00000489573 ARID3BQ8IVW6 561 aaPredicted RBP22.12■■□□□ 1.13
SMC4-221ENST00000489573 RIN3Q8TB24 985 aa22.12■■□□□ 1.13
SMC4-221ENST00000489573 MAML1Q92585 1016 aa22.12■■□□□ 1.13
SMC4-221ENST00000489573 ARHGEF2Q92974 986 aaKnown RBP22.12■■□□□ 1.13
SMC4-221ENST00000489573 TEKT5Q96M29 485 aa22.12■■□□□ 1.13
SMC4-221ENST00000489573 IL12RB2Q99665 862 aa22.12■■□□□ 1.13
SMC4-221ENST00000489573 APOL5Q9BWW9 433 aa22.12■■□□□ 1.13
SMC4-221ENST00000489573 GBA3Q9H227 469 aa22.12■■□□□ 1.13
SMC4-221ENST00000489573 VIPAS39Q9H9C1 493 aa22.12■■□□□ 1.13
SMC4-221ENST00000489573 DNAJC17Q9NVM6 304 aaKnown RBP22.12■■□□□ 1.13
SMC4-221ENST00000489573 LMCD1Q9NZU5 365 aa22.12■■□□□ 1.13
SMC4-221ENST00000489573 HPCAL4Q9UM19 191 aa22.12■■□□□ 1.13
SMC4-221ENST00000489573 ILVBLA1L0T0 632 aa22.12■■□□□ 1.13
SMC4-221ENST00000489573 E7EVH7 732 aa22.12■■□□□ 1.13
SMC4-221ENST00000489573 GOLGA8MH3BSY2 632 aa22.12■■□□□ 1.13
SMC4-221ENST00000489573 ZBTB24O43167 697 aaPredicted RBP22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms