RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 HOXD12P35452 270 aa10.88□□□□□ -0.67
SCAMP4-208ENST00000489554 HDAC4P56524 1084 aa10.88□□□□□ -0.67
SCAMP4-208ENST00000489554 RNASE9P60153 205 aaKnown RBP10.88□□□□□ -0.67
SCAMP4-208ENST00000489554 ETF1P62495 437 aaKnown RBP10.88□□□□□ -0.67
SCAMP4-208ENST00000489554 TUBB4BP68371 445 aa10.88□□□□□ -0.67
SCAMP4-208ENST00000489554 RPL6Q02878 288 aaKnown RBP10.88□□□□□ -0.67
SCAMP4-208ENST00000489554 ZC3H12AQ5D1E8 599 aaKnown RBP10.88□□□□□ -0.67
SCAMP4-208ENST00000489554 LYSMD4Q5XG99 296 aa10.88□□□□□ -0.67
SCAMP4-208ENST00000489554 MBLAC2Q68D91 279 aa10.88□□□□□ -0.67
SCAMP4-208ENST00000489554 IL31Q6EBC2 164 aa10.88□□□□□ -0.67
SCAMP4-208ENST00000489554 DCUN1D2Q6PH85 259 aa10.88□□□□□ -0.67
SCAMP4-208ENST00000489554 KIAA1324Q6UXG2 1013 aaKnown RBP10.88□□□□□ -0.67
SCAMP4-208ENST00000489554 NT5DC3Q86UY8 548 aa10.88□□□□□ -0.67
SCAMP4-208ENST00000489554 ADIPOR2Q86V24 386 aa10.88□□□□□ -0.67
SCAMP4-208ENST00000489554 SYT12Q8IV01 421 aa10.88□□□□□ -0.67
SCAMP4-208ENST00000489554 TMEFF1Q8IYR6 380 aa10.88□□□□□ -0.67
SCAMP4-208ENST00000489554 SLC35F6Q8N357 371 aa10.88□□□□□ -0.67
SCAMP4-208ENST00000489554 FRMD1Q8N878 549 aa10.88□□□□□ -0.67
SCAMP4-208ENST00000489554 FIBINQ8TAL6 211 aa10.88□□□□□ -0.67
SCAMP4-208ENST00000489554 SORCS1Q8WY21 1168 aa10.88□□□□□ -0.67
SCAMP4-208ENST00000489554 PIGKQ92643 395 aa10.88□□□□□ -0.67
SCAMP4-208ENST00000489554 PRICKLE1Q96MT3 831 aaPredicted RBP10.88□□□□□ -0.67
SCAMP4-208ENST00000489554 TBCBQ99426 244 aa10.88□□□□□ -0.67
SCAMP4-208ENST00000489554 CNPY3Q9BT09 278 aa10.88□□□□□ -0.67
SCAMP4-208ENST00000489554 SMOC1Q9H4F8 434 aa10.88□□□□□ -0.67
SCAMP4-208ENST00000489554 FBRSQ9HAH7 460 aa10.88□□□□□ -0.67
SCAMP4-208ENST00000489554 PRDM16Q9HAZ2 1276 aa10.88□□□□□ -0.67
SCAMP4-208ENST00000489554 TMEM51Q9NW97 253 aa10.88□□□□□ -0.67
SCAMP4-208ENST00000489554 DDIT4Q9NX09 232 aa10.88□□□□□ -0.67
SCAMP4-208ENST00000489554 RRN3Q9NYV6 651 aa10.88□□□□□ -0.67
SCAMP4-208ENST00000489554 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.88□□□□□ -0.67
SCAMP4-208ENST00000489554 STIM2Q9P246 746 aa10.88□□□□□ -0.67
SCAMP4-208ENST00000489554 EVLQ9UI08 416 aaPredicted RBP10.88□□□□□ -0.67
SCAMP4-208ENST00000489554 CYP8B1Q9UNU6 501 aa10.88□□□□□ -0.67
SCAMP4-208ENST00000489554 HYOU1Q9Y4L1 999 aa10.88□□□□□ -0.67
SCAMP4-208ENST00000489554 ALG6Q9Y672 507 aa10.88□□□□□ -0.67
SCAMP4-208ENST00000489554 CACNA1AO00555 2505 aa10.88□□□□□ -0.67
SCAMP4-208ENST00000489554 SDK1Q7Z5N4 2213 aa10.87□□□□□ -0.67
SCAMP4-208ENST00000489554 DCDC2BA2VCK2 349 aa10.87□□□□□ -0.67
SCAMP4-208ENST00000489554 KCNU1A8MYU2 1149 aa10.87□□□□□ -0.67
SCAMP4-208ENST00000489554 F5H5T6 163 aa10.87□□□□□ -0.67
SCAMP4-208ENST00000489554 I6L893 689 aaPredicted RBP10.87□□□□□ -0.67
SCAMP4-208ENST00000489554 KIF5CO60282 957 aa10.87□□□□□ -0.67
SCAMP4-208ENST00000489554 LRCH4O75427 683 aa10.87□□□□□ -0.67
SCAMP4-208ENST00000489554 ASLP04424 464 aa10.87□□□□□ -0.67
SCAMP4-208ENST00000489554 EPHX1P07099 455 aa10.87□□□□□ -0.67
SCAMP4-208ENST00000489554 DLDP09622 509 aaKnown RBP10.87□□□□□ -0.67
SCAMP4-208ENST00000489554 PDGFRAP16234 1089 aa10.87□□□□□ -0.67
SCAMP4-208ENST00000489554 POLR2EP19388 210 aaKnown RBP10.87□□□□□ -0.67
SCAMP4-208ENST00000489554 TACR2P21452 398 aa10.87□□□□□ -0.67
SCAMP4-208ENST00000489554 COMTP21964 271 aa10.87□□□□□ -0.67
SCAMP4-208ENST00000489554 PRKCHP24723 683 aa10.87□□□□□ -0.67
SCAMP4-208ENST00000489554 CCR1P32246 355 aa10.87□□□□□ -0.67
SCAMP4-208ENST00000489554 CD70P32970 193 aa10.87□□□□□ -0.67
SCAMP4-208ENST00000489554 PTGER3P43115 390 aa10.87□□□□□ -0.67
SCAMP4-208ENST00000489554 NOP2P46087 812 aaKnown RBP10.87□□□□□ -0.67
SCAMP4-208ENST00000489554 TAS2R40P59535 323 aa10.87□□□□□ -0.67
SCAMP4-208ENST00000489554 RPS24P62847 133 aaKnown RBP10.87□□□□□ -0.67
SCAMP4-208ENST00000489554 SLC25A11Q02978 314 aaKnown RBP10.87□□□□□ -0.67
SCAMP4-208ENST00000489554 CAMK2GQ13555 558 aaPredicted RBP10.87□□□□□ -0.67
SCAMP4-208ENST00000489554 CDH18Q13634 790 aa10.87□□□□□ -0.67
SCAMP4-208ENST00000489554 MESDQ14696 234 aa10.87□□□□□ -0.67
SCAMP4-208ENST00000489554 SLC25A52Q3SY17 297 aa10.87□□□□□ -0.67
SCAMP4-208ENST00000489554 FNDC3BQ53EP0 1204 aaKnown RBP10.87□□□□□ -0.67
SCAMP4-208ENST00000489554 ARTNQ5T4W7 220 aa10.87□□□□□ -0.67
SCAMP4-208ENST00000489554 STPG1Q5TH74 334 aa10.87□□□□□ -0.67
SCAMP4-208ENST00000489554 TTC39BQ5VTQ0 682 aaPredicted RBP10.87□□□□□ -0.67
SCAMP4-208ENST00000489554 PEAR1Q5VY43 1037 aaPredicted RBP10.87□□□□□ -0.67
SCAMP4-208ENST00000489554 TXNRD3NBQ6F5E7 133 aa10.87□□□□□ -0.67
SCAMP4-208ENST00000489554 TCEAL6Q6IPX3 200 aa10.87□□□□□ -0.67
SCAMP4-208ENST00000489554 ARMCX6Q7L4S7 300 aa10.87□□□□□ -0.67
SCAMP4-208ENST00000489554 RABEPKQ7Z6M1 372 aa10.87□□□□□ -0.67
SCAMP4-208ENST00000489554 CHSY1Q86X52 802 aa10.87□□□□□ -0.67
SCAMP4-208ENST00000489554 TMPRSS6Q8IU80 811 aa10.87□□□□□ -0.67
SCAMP4-208ENST00000489554 LGI2Q8N0V4 545 aa10.87□□□□□ -0.67
SCAMP4-208ENST00000489554 WFDC5Q8TCV5 224 aa10.87□□□□□ -0.67
SCAMP4-208ENST00000489554 PRCCQ92733 491 aaPredicted RBP10.87□□□□□ -0.67
SCAMP4-208ENST00000489554 TCEAL3Q969E4 200 aa10.87□□□□□ -0.67
SCAMP4-208ENST00000489554 RNF34Q969K3 372 aa10.87□□□□□ -0.67
SCAMP4-208ENST00000489554 ERLEC1Q96DZ1 483 aa10.87□□□□□ -0.67
SCAMP4-208ENST00000489554 PGAP3Q96FM1 320 aaPredicted RBP10.87□□□□□ -0.67
SCAMP4-208ENST00000489554 SIPA1Q96FS4 1042 aa10.87□□□□□ -0.67
SCAMP4-208ENST00000489554 CALR3Q96L12 384 aaKnown RBP10.87□□□□□ -0.67
SCAMP4-208ENST00000489554 PEBP4Q96S96 227 aa10.87□□□□□ -0.67
SCAMP4-208ENST00000489554 EDEM2Q9BV94 578 aa10.87□□□□□ -0.67
SCAMP4-208ENST00000489554 TLR10Q9BXR5 811 aa10.87□□□□□ -0.67
SCAMP4-208ENST00000489554 MKRN2Q9H000 416 aaKnown RBP10.87□□□□□ -0.67
SCAMP4-208ENST00000489554 SLC6A17Q9H1V8 727 aa10.87□□□□□ -0.67
SCAMP4-208ENST00000489554 TMEM245Q9H330 911 aa10.87□□□□□ -0.67
SCAMP4-208ENST00000489554 ANLNQ9NQW6 1124 aa10.87□□□□□ -0.67
SCAMP4-208ENST00000489554 ITM2CQ9NQX7 267 aa10.87□□□□□ -0.67
SCAMP4-208ENST00000489554 USP36Q9P275 1121 aaKnown RBP10.87□□□□□ -0.67
SCAMP4-208ENST00000489554 IP6K2Q9UHH9 426 aa10.87□□□□□ -0.67
SCAMP4-208ENST00000489554 MYO18AQ92614 2054 aaKnown RBP10.87□□□□□ -0.67
SCAMP4-208ENST00000489554 DMXL1Q9Y485 3027 aa10.87□□□□□ -0.67
SCAMP4-208ENST00000489554 DCHS1Q96JQ0 3298 aa10.86□□□□□ -0.67
SCAMP4-208ENST00000489554 LNP1A1A4G5 178 aa10.86□□□□□ -0.67
SCAMP4-208ENST00000489554 TMEM110-MUSTN1A8MSY1 372 aa10.86□□□□□ -0.67
SCAMP4-208ENST00000489554 H0Y626 953 aa10.86□□□□□ -0.67
SCAMP4-208ENST00000489554 MYO1FO00160 1098 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms