RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 TBC1D3GQ6DHY5 549 aa7.8□□□□□ -1.16
EXOSC3-206ENST00000489414 TBC1D3CQ6IPX1 549 aa7.8□□□□□ -1.16
EXOSC3-206ENST00000489414 BHLHB9Q6PI77 547 aa7.8□□□□□ -1.16
EXOSC3-206ENST00000489414 SND1Q7KZF4 910 aaKnown RBP eCLIP7.8□□□□□ -1.16
EXOSC3-206ENST00000489414 MAEAQ7L5Y9 396 aa7.8□□□□□ -1.16
EXOSC3-206ENST00000489414 TRIM69Q86WT6 500 aa7.8□□□□□ -1.16
EXOSC3-206ENST00000489414 HPS6Q86YV9 775 aa7.8□□□□□ -1.16
EXOSC3-206ENST00000489414 ULK2Q8IYT8 1036 aa7.8□□□□□ -1.16
EXOSC3-206ENST00000489414 TBC1D3Q8IZP1 549 aaPredicted RBP7.8□□□□□ -1.16
EXOSC3-206ENST00000489414 AADATQ8N5Z0 425 aa7.8□□□□□ -1.16
EXOSC3-206ENST00000489414 DEPTORQ8TB45 409 aa7.8□□□□□ -1.16
EXOSC3-206ENST00000489414 ZNF775Q96BV0 537 aaPredicted RBP7.8□□□□□ -1.16
EXOSC3-206ENST00000489414 ACO2Q99798 780 aaKnown RBP7.8□□□□□ -1.16
EXOSC3-206ENST00000489414 KIFC3Q9BVG8 833 aa7.8□□□□□ -1.16
EXOSC3-206ENST00000489414 SPRTNQ9H040 489 aaPredicted RBP7.8□□□□□ -1.16
EXOSC3-206ENST00000489414 ZMYND12Q9H0C1 365 aa7.8□□□□□ -1.16
EXOSC3-206ENST00000489414 GPR27Q9NS67 375 aa7.8□□□□□ -1.16
EXOSC3-206ENST00000489414 EHD2Q9NZN4 543 aa7.8□□□□□ -1.16
EXOSC3-206ENST00000489414 KLF15Q9UIH9 416 aa7.8□□□□□ -1.16
EXOSC3-206ENST00000489414 NTNG1Q9Y2I2 539 aa7.8□□□□□ -1.16
EXOSC3-206ENST00000489414 TRRAPQ9Y4A5 3859 aa7.79□□□□□ -1.16
EXOSC3-206ENST00000489414 NCOA6Q14686 2063 aaPredicted RBP7.79□□□□□ -1.16
EXOSC3-206ENST00000489414 C3orf80F5H4A9 247 aa7.79□□□□□ -1.16
EXOSC3-206ENST00000489414 PIRO00625 290 aa7.79□□□□□ -1.16
EXOSC3-206ENST00000489414 STX6O43752 255 aa7.79□□□□□ -1.16
EXOSC3-206ENST00000489414 USO1O60763 962 aaKnown RBP7.79□□□□□ -1.16
EXOSC3-206ENST00000489414 CXCL8P10145 99 aa7.79□□□□□ -1.16
EXOSC3-206ENST00000489414 CPA1P15085 419 aa7.79□□□□□ -1.16
EXOSC3-206ENST00000489414 GOT1P17174 413 aa7.79□□□□□ -1.16
EXOSC3-206ENST00000489414 HNRNPH3P31942 346 aaKnown RBP7.79□□□□□ -1.16
EXOSC3-206ENST00000489414 EFNA5P52803 228 aa7.79□□□□□ -1.16
EXOSC3-206ENST00000489414 ZNF235Q14590 738 aa7.79□□□□□ -1.16
EXOSC3-206ENST00000489414 EPHA7Q15375 998 aa7.79□□□□□ -1.16
EXOSC3-206ENST00000489414 CHRNA6Q15825 494 aa7.79□□□□□ -1.16
EXOSC3-206ENST00000489414 KLHL40Q2TBA0 621 aa7.79□□□□□ -1.16
EXOSC3-206ENST00000489414 PLEKHN1Q494U1 663 aaPredicted RBP7.79□□□□□ -1.16
EXOSC3-206ENST00000489414 SETMARQ53H47 684 aaPredicted RBP7.79□□□□□ -1.16
EXOSC3-206ENST00000489414 INTS6LQ5JSJ4 861 aaKnown RBP7.79□□□□□ -1.16
EXOSC3-206ENST00000489414 PHF19Q5T6S3 580 aa7.79□□□□□ -1.16
EXOSC3-206ENST00000489414 DUS1LQ6P1R4 473 aaKnown RBP7.79□□□□□ -1.16
EXOSC3-206ENST00000489414 RALYLQ86SE5 291 aaKnown RBP7.79□□□□□ -1.16
EXOSC3-206ENST00000489414 CYB5D2Q8WUJ1 264 aa7.79□□□□□ -1.16
EXOSC3-206ENST00000489414 SYAP1Q96A49 352 aaPredicted RBP7.79□□□□□ -1.16
EXOSC3-206ENST00000489414 CCDC120Q96HB5 630 aa7.79□□□□□ -1.16
EXOSC3-206ENST00000489414 DYDC2Q96IM9 177 aa7.79□□□□□ -1.16
EXOSC3-206ENST00000489414 NOX5Q96PH1 765 aa7.79□□□□□ -1.16
EXOSC3-206ENST00000489414 TREX2Q9BQ50 279 aaPredicted RBP7.79□□□□□ -1.16
EXOSC3-206ENST00000489414 PYM1Q9BRP8 204 aaKnown RBP7.79□□□□□ -1.16
EXOSC3-206ENST00000489414 ASPSCR1Q9BZE9 553 aa7.79□□□□□ -1.16
EXOSC3-206ENST00000489414 PLA2G12AQ9BZM1 189 aa7.79□□□□□ -1.16
EXOSC3-206ENST00000489414 CCSER1Q9C0I3 900 aa7.79□□□□□ -1.16
EXOSC3-206ENST00000489414 ENKD1Q9H0I2 346 aa7.79□□□□□ -1.16
EXOSC3-206ENST00000489414 PLEKHA5Q9HAU0 1116 aa7.79□□□□□ -1.16
EXOSC3-206ENST00000489414 ANKEF1Q9NU02 776 aa7.79□□□□□ -1.16
EXOSC3-206ENST00000489414 AKAP7Q9P0M2 348 aaPredicted RBP7.79□□□□□ -1.16
EXOSC3-206ENST00000489414 GTF3C4Q9UKN8 822 aa7.79□□□□□ -1.16
EXOSC3-206ENST00000489414 CLEC4EQ9ULY5 219 aa7.79□□□□□ -1.16
EXOSC3-206ENST00000489414 COPG1Q9Y678 874 aaKnown RBP7.79□□□□□ -1.16
EXOSC3-206ENST00000489414 NYNRINQ9P2P1 1898 aaKnown RBP7.79□□□□□ -1.16
EXOSC3-206ENST00000489414 CYP3A7-CYP3A51PA0A087WV96 503 aa7.78□□□□□ -1.16
EXOSC3-206ENST00000489414 TTC26A0AVF1 554 aa7.78□□□□□ -1.16
EXOSC3-206ENST00000489414 HGSO14964 777 aaPredicted RBP7.78□□□□□ -1.16
EXOSC3-206ENST00000489414 PHACTR2O75167 634 aa7.78□□□□□ -1.16
EXOSC3-206ENST00000489414 CRLF1O75462 422 aa7.78□□□□□ -1.16
EXOSC3-206ENST00000489414 LYPLA2O95372 231 aa7.78□□□□□ -1.16
EXOSC3-206ENST00000489414 TDP2O95551 362 aa7.78□□□□□ -1.16
EXOSC3-206ENST00000489414 KRT19P08727 400 aa7.78□□□□□ -1.16
EXOSC3-206ENST00000489414 ZSCAN22P10073 491 aaPredicted RBP7.78□□□□□ -1.16
EXOSC3-206ENST00000489414 CYP3A7P24462 503 aa7.78□□□□□ -1.16
EXOSC3-206ENST00000489414 GJB2P29033 226 aa7.78□□□□□ -1.16
EXOSC3-206ENST00000489414 STAT5AP42229 794 aa7.78□□□□□ -1.16
EXOSC3-206ENST00000489414 TUBP50607 506 aa7.78□□□□□ -1.16
EXOSC3-206ENST00000489414 Q0VFX4 171 aa7.78□□□□□ -1.16
EXOSC3-206ENST00000489414 FZD2Q14332 565 aa7.78□□□□□ -1.16
EXOSC3-206ENST00000489414 ENOX2Q16206 610 aaKnown RBP7.78□□□□□ -1.16
EXOSC3-206ENST00000489414 FOXD4L5Q5VV16 416 aaPredicted RBP7.78□□□□□ -1.16
EXOSC3-206ENST00000489414 C9orf57Q5W0N0 161 aa7.78□□□□□ -1.16
EXOSC3-206ENST00000489414 HMBOX1Q6NT76 420 aa7.78□□□□□ -1.16
EXOSC3-206ENST00000489414 ESRP1Q6NXG1 681 aaKnown RBP7.78□□□□□ -1.16
EXOSC3-206ENST00000489414 RPTNQ6XPR3 784 aa7.78□□□□□ -1.16
EXOSC3-206ENST00000489414 SPATA2LQ8IUW3 424 aaPredicted RBP7.78□□□□□ -1.16
EXOSC3-206ENST00000489414 CCNJLQ8IV13 435 aa7.78□□□□□ -1.16
EXOSC3-206ENST00000489414 RHOT1Q8IXI2 618 aa7.78□□□□□ -1.16
EXOSC3-206ENST00000489414 LMX1AQ8TE12 382 aa7.78□□□□□ -1.16
EXOSC3-206ENST00000489414 FOXD4L4Q8WXT5 416 aaPredicted RBP7.78□□□□□ -1.16
EXOSC3-206ENST00000489414 ART4Q93070 314 aa7.78□□□□□ -1.16
EXOSC3-206ENST00000489414 FAM131CQ96AQ9 280 aa7.78□□□□□ -1.16
EXOSC3-206ENST00000489414 ACBD6Q9BR61 282 aa7.78□□□□□ -1.16
EXOSC3-206ENST00000489414 TMEM121Q9BTD3 319 aa7.78□□□□□ -1.16
EXOSC3-206ENST00000489414 PLA2G4CQ9UP65 541 aa7.78□□□□□ -1.16
EXOSC3-206ENST00000489414 NAALADL1Q9UQQ1 740 aa7.78□□□□□ -1.16
EXOSC3-206ENST00000489414 CDC14CA4D256 554 aa7.77□□□□□ -1.17
EXOSC3-206ENST00000489414 INPP4BO15327 924 aa7.77□□□□□ -1.17
EXOSC3-206ENST00000489414 XPOTO43592 962 aaKnown RBP7.77□□□□□ -1.17
EXOSC3-206ENST00000489414 RNASEH1O60930 286 aaKnown RBP7.77□□□□□ -1.17
EXOSC3-206ENST00000489414 GCATO75600 419 aa7.77□□□□□ -1.17
EXOSC3-206ENST00000489414 SLITRK3O94933 977 aa7.77□□□□□ -1.17
EXOSC3-206ENST00000489414 CYP21A2P08686 494 aa7.77□□□□□ -1.17
EXOSC3-206ENST00000489414 SYT1P21579 422 aa7.77□□□□□ -1.17
EXOSC3-206ENST00000489414 SLC8A1P32418 973 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms