RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 SH3PXD2AQ5TCZ1 1133 aa9.37□□□□□ -0.91
HDAC6-232ENST00000489053 PSAPL1Q6NUJ1 521 aa9.37□□□□□ -0.91
HDAC6-232ENST00000489053 STRADAQ7RTN6 431 aa9.37□□□□□ -0.91
HDAC6-232ENST00000489053 C14orf80Q86SX3 495 aa9.37□□□□□ -0.91
HDAC6-232ENST00000489053 PHF13Q86YI8 300 aaPredicted RBP9.37□□□□□ -0.91
HDAC6-232ENST00000489053 SLC41A1Q8IVJ1 513 aa9.37□□□□□ -0.91
HDAC6-232ENST00000489053 DRC7Q8IY82 874 aa9.37□□□□□ -0.91
HDAC6-232ENST00000489053 STK40Q8N2I9 435 aa9.37□□□□□ -0.91
HDAC6-232ENST00000489053 RYBPQ8N488 228 aaPredicted RBP9.37□□□□□ -0.91
HDAC6-232ENST00000489053 MINDY1Q8N5J2 469 aa9.37□□□□□ -0.91
HDAC6-232ENST00000489053 C3orf20Q8ND61 904 aa9.37□□□□□ -0.91
HDAC6-232ENST00000489053 OR14C36Q8NHC7 312 aa9.37□□□□□ -0.91
HDAC6-232ENST00000489053 FAM172AQ8WUF8 416 aa9.37□□□□□ -0.91
HDAC6-232ENST00000489053 MCEEQ96PE7 176 aa9.37□□□□□ -0.91
HDAC6-232ENST00000489053 EPAS1Q99814 870 aa9.37□□□□□ -0.91
HDAC6-232ENST00000489053 MTG2Q9H4K7 406 aa9.37□□□□□ -0.91
HDAC6-232ENST00000489053 ATP13A1Q9HD20 1204 aa9.37□□□□□ -0.91
HDAC6-232ENST00000489053 RTN4Q9NQC3 1192 aaKnown RBP9.37□□□□□ -0.91
HDAC6-232ENST00000489053 MPP6Q9NZW5 540 aa9.37□□□□□ -0.91
HDAC6-232ENST00000489053 EIF2B4Q9UI10 523 aaKnown RBP9.37□□□□□ -0.91
HDAC6-232ENST00000489053 SLCO3A1Q9UIG8 710 aa9.37□□□□□ -0.91
HDAC6-232ENST00000489053 TMEM59LQ9UK28 342 aa9.37□□□□□ -0.91
HDAC6-232ENST00000489053 INTS6Q9UL03 887 aaKnown RBP9.37□□□□□ -0.91
HDAC6-232ENST00000489053 PCDHB9Q9Y5E1 797 aa9.37□□□□□ -0.91
HDAC6-232ENST00000489053 SNX10Q9Y5X0 201 aa9.37□□□□□ -0.91
HDAC6-232ENST00000489053 CNOT1A5YKK6 2376 aaKnown RBP9.37□□□□□ -0.91
HDAC6-232ENST00000489053 DNAH14Q0VDD8 3507 aa9.36□□□□□ -0.91
HDAC6-232ENST00000489053 DCHS1Q96JQ0 3298 aa9.36□□□□□ -0.91
HDAC6-232ENST00000489053 TBC1D3DA0A087WVF3 549 aa9.36□□□□□ -0.91
HDAC6-232ENST00000489053 TBC1D3IA0A087WXS9 549 aa9.36□□□□□ -0.91
HDAC6-232ENST00000489053 TBC1D3EA0A087X179 549 aa9.36□□□□□ -0.91
HDAC6-232ENST00000489053 TBC1D3KA0A087X1G2 549 aa9.36□□□□□ -0.91
HDAC6-232ENST00000489053 A0A1W2PP55 124 aa9.36□□□□□ -0.91
HDAC6-232ENST00000489053 A0A1W2PQC6 194 aa9.36□□□□□ -0.91
HDAC6-232ENST00000489053 MED19A0JLT2 244 aaPredicted RBP9.36□□□□□ -0.91
HDAC6-232ENST00000489053 TBC1D3FA6NER0 549 aaPredicted RBP9.36□□□□□ -0.91
HDAC6-232ENST00000489053 LRRC53A6NM62 1247 aa9.36□□□□□ -0.91
HDAC6-232ENST00000489053 METTL12A8MUP2 240 aa9.36□□□□□ -0.91
HDAC6-232ENST00000489053 TBC1D3LB9A6J9 549 aa9.36□□□□□ -0.91
HDAC6-232ENST00000489053 TEX33O43247 280 aa9.36□□□□□ -0.91
HDAC6-232ENST00000489053 CNTN5O94779 1100 aa9.36□□□□□ -0.91
HDAC6-232ENST00000489053 KCNK5O95279 499 aa9.36□□□□□ -0.91
HDAC6-232ENST00000489053 IGLV3-19P01714 112 aa9.36□□□□□ -0.91
HDAC6-232ENST00000489053 TBC1D3HP0C7X1 549 aa9.36□□□□□ -0.91
HDAC6-232ENST00000489053 UNGP13051 313 aaPredicted RBP9.36□□□□□ -0.91
HDAC6-232ENST00000489053 TFE3P19532 575 aaPredicted RBP9.36□□□□□ -0.91
HDAC6-232ENST00000489053 C5AR1P21730 350 aa9.36□□□□□ -0.91
HDAC6-232ENST00000489053 ACSL1P33121 698 aa9.36□□□□□ -0.91
HDAC6-232ENST00000489053 ADRA1BP35368 520 aa9.36□□□□□ -0.91
HDAC6-232ENST00000489053 CLCN6P51797 869 aa9.36□□□□□ -0.91
HDAC6-232ENST00000489053 PLK1P53350 603 aa9.36□□□□□ -0.91
HDAC6-232ENST00000489053 UBASH3AP57075 661 aa9.36□□□□□ -0.91
HDAC6-232ENST00000489053 GEMIN4P57678 1058 aaKnown RBP9.36□□□□□ -0.91
HDAC6-232ENST00000489053 EIF4EBP2Q13542 120 aaPredicted RBP9.36□□□□□ -0.91
HDAC6-232ENST00000489053 ARID5BQ14865 1188 aa9.36□□□□□ -0.91
HDAC6-232ENST00000489053 C15orf59Q2T9L4 293 aaPredicted RBP9.36□□□□□ -0.91
HDAC6-232ENST00000489053 CCDC14Q49A88 953 aa9.36□□□□□ -0.91
HDAC6-232ENST00000489053 C9orf64Q5T6V5 341 aa9.36□□□□□ -0.91
HDAC6-232ENST00000489053 PEAR1Q5VY43 1037 aaPredicted RBP9.36□□□□□ -0.91
HDAC6-232ENST00000489053 TBC1D3GQ6DHY5 549 aa9.36□□□□□ -0.91
HDAC6-232ENST00000489053 TBC1D3CQ6IPX1 549 aa9.36□□□□□ -0.91
HDAC6-232ENST00000489053 ACAD10Q6JQN1 1059 aa9.36□□□□□ -0.91
HDAC6-232ENST00000489053 CXorf57Q6NSI4 855 aaKnown RBP9.36□□□□□ -0.91
HDAC6-232ENST00000489053 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.36□□□□□ -0.91
HDAC6-232ENST00000489053 ZNF783Q6ZMS7 281 aa9.36□□□□□ -0.91
HDAC6-232ENST00000489053 Q6ZVU0 165 aa9.36□□□□□ -0.91
HDAC6-232ENST00000489053 SLFN11Q7Z7L1 901 aa9.36□□□□□ -0.91
HDAC6-232ENST00000489053 TBC1D3Q8IZP1 549 aaPredicted RBP9.36□□□□□ -0.91
HDAC6-232ENST00000489053 DCAF4L2Q8NA75 395 aa9.36□□□□□ -0.91
HDAC6-232ENST00000489053 NT5C3BQ969T7 300 aa9.36□□□□□ -0.91
HDAC6-232ENST00000489053 TBC1D31Q96DN5 1066 aa9.36□□□□□ -0.91
HDAC6-232ENST00000489053 TRIM11Q96F44 468 aa9.36□□□□□ -0.91
HDAC6-232ENST00000489053 PPP1R16AQ96I34 528 aa9.36□□□□□ -0.91
HDAC6-232ENST00000489053 LMLNQ96KR4 655 aa9.36□□□□□ -0.91
HDAC6-232ENST00000489053 MRGPRX3Q96LB0 322 aa9.36□□□□□ -0.91
HDAC6-232ENST00000489053 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.36□□□□□ -0.91
HDAC6-232ENST00000489053 C6orf106Q9H6K1 298 aaPredicted RBP9.36□□□□□ -0.91
HDAC6-232ENST00000489053 AASDHPPTQ9NRN7 309 aa9.36□□□□□ -0.91
HDAC6-232ENST00000489053 PARVAQ9NVD7 372 aa9.36□□□□□ -0.91
HDAC6-232ENST00000489053 DONSONQ9NYP3 566 aa9.36□□□□□ -0.91
HDAC6-232ENST00000489053 OR12D3Q9UGF7 316 aa9.36□□□□□ -0.91
HDAC6-232ENST00000489053 FZD4Q9ULV1 537 aa9.36□□□□□ -0.91
HDAC6-232ENST00000489053 TPX2Q9ULW0 747 aaKnown RBP9.36□□□□□ -0.91
HDAC6-232ENST00000489053 TBC1D30Q9Y2I9 924 aa9.36□□□□□ -0.91
HDAC6-232ENST00000489053 CHD8Q9HCK8 2581 aa9.36□□□□□ -0.91
HDAC6-232ENST00000489053 ITIH6Q6UXX5 1313 aa9.35□□□□□ -0.91
HDAC6-232ENST00000489053 A0A1B0GTH6 734 aa9.35□□□□□ -0.91
HDAC6-232ENST00000489053 ILVBLA1L0T0 632 aa9.35□□□□□ -0.91
HDAC6-232ENST00000489053 C2CD4BA6NLJ0 364 aa9.35□□□□□ -0.91
HDAC6-232ENST00000489053 SIGLEC16A6NMB1 481 aa9.35□□□□□ -0.91
HDAC6-232ENST00000489053 KPNA3O00505 521 aaPredicted RBP9.35□□□□□ -0.91
HDAC6-232ENST00000489053 ALOX15BO15296 676 aa9.35□□□□□ -0.91
HDAC6-232ENST00000489053 DAPK3O43293 454 aa9.35□□□□□ -0.91
HDAC6-232ENST00000489053 RAMP2O60895 175 aa9.35□□□□□ -0.91
HDAC6-232ENST00000489053 GJB6O95452 261 aa9.35□□□□□ -0.91
HDAC6-232ENST00000489053 PRNPP04156 253 aa9.35□□□□□ -0.91
HDAC6-232ENST00000489053 PLEKP08567 350 aaPredicted RBP9.35□□□□□ -0.91
HDAC6-232ENST00000489053 TPM1P09493 284 aa9.35□□□□□ -0.91
HDAC6-232ENST00000489053 GOT1P17174 413 aa9.35□□□□□ -0.91
HDAC6-232ENST00000489053 PSMA2P25787 234 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms