RNA–Protein interactions for RNA: ENST00000488986.1

SNRNP27-205, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 336 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-205ENST00000488986 TAF1DQ9H5J8 278 aaPredicted RBP4.37□□□□□ -1.71
SNRNP27-205ENST00000488986 GRHPRQ9UBQ7 328 aa4.37□□□□□ -1.71
SNRNP27-205ENST00000488986 LZTS1Q9Y250 596 aa4.37□□□□□ -1.71
SNRNP27-205ENST00000488986 PKP3Q9Y446 797 aa4.37□□□□□ -1.71
SNRNP27-205ENST00000488986 FAM90A8PA6NJQ4 464 aa4.36□□□□□ -1.71
SNRNP27-205ENST00000488986 A6NNC1 897 aa4.36□□□□□ -1.71
SNRNP27-205ENST00000488986 H0Y3Z8 333 aa4.36□□□□□ -1.71
SNRNP27-205ENST00000488986 SEPT4O43236 478 aa4.36□□□□□ -1.71
SNRNP27-205ENST00000488986 CCNT1O60563 726 aaKnown RBP4.36□□□□□ -1.71
SNRNP27-205ENST00000488986 NEURL1O76050 574 aa4.36□□□□□ -1.71
SNRNP27-205ENST00000488986 TOMM40O96008 361 aa4.36□□□□□ -1.71
SNRNP27-205ENST00000488986 HLA-DQA2P01906 255 aa4.36□□□□□ -1.71
SNRNP27-205ENST00000488986 FAM90A13PP0C7W8 464 aa4.36□□□□□ -1.71
SNRNP27-205ENST00000488986 FAM90A24PP0C7X0 464 aa4.36□□□□□ -1.71
SNRNP27-205ENST00000488986 HOXB9P17482 250 aaPredicted RBP4.36□□□□□ -1.71
SNRNP27-205ENST00000488986 CHKAP35790 457 aa4.36□□□□□ -1.71
SNRNP27-205ENST00000488986 CYP2J2P51589 502 aa4.36□□□□□ -1.71
SNRNP27-205ENST00000488986 SEMA3AQ14563 771 aa4.36□□□□□ -1.71
SNRNP27-205ENST00000488986 SLC30A9Q6PML9 568 aa4.36□□□□□ -1.71
SNRNP27-205ENST00000488986 KIAA1324Q6UXG2 1013 aaKnown RBP4.36□□□□□ -1.71
SNRNP27-205ENST00000488986 RTL10Q7L3V2 364 aa4.36□□□□□ -1.71
SNRNP27-205ENST00000488986 CCDC25Q86WR0 208 aa4.36□□□□□ -1.71
SNRNP27-205ENST00000488986 DPP10Q8N608 796 aa4.36□□□□□ -1.71
SNRNP27-205ENST00000488986 EXD3Q8N9H8 876 aa4.36□□□□□ -1.71
SNRNP27-205ENST00000488986 SAYSD1Q9NPB0 183 aa4.36□□□□□ -1.71
SNRNP27-205ENST00000488986 SPAG4Q9NPE6 437 aa4.36□□□□□ -1.71
SNRNP27-205ENST00000488986 KCND3Q9UK17 655 aa4.36□□□□□ -1.71
SNRNP27-205ENST00000488986 NOTCH4Q99466 2003 aa4.35□□□□□ -1.71
SNRNP27-205ENST00000488986 TMEM247A6NEH6 219 aa4.35□□□□□ -1.71
SNRNP27-205ENST00000488986 E7EVH7 732 aa4.35□□□□□ -1.71
SNRNP27-205ENST00000488986 MDM4O15151 490 aa4.35□□□□□ -1.71
SNRNP27-205ENST00000488986 ATG13O75143 517 aa4.35□□□□□ -1.71
SNRNP27-205ENST00000488986 KRT38O76015 456 aa4.35□□□□□ -1.71
SNRNP27-205ENST00000488986 PKMP14618 531 aaKnown RBP4.35□□□□□ -1.71
SNRNP27-205ENST00000488986 TNFRSF1BP20333 461 aa4.35□□□□□ -1.71
SNRNP27-205ENST00000488986 PRPH2P23942 346 aa4.35□□□□□ -1.71
SNRNP27-205ENST00000488986 KLRC2P26717 231 aa4.35□□□□□ -1.71
SNRNP27-205ENST00000488986 CST5P28325 142 aaPredicted RBP4.35□□□□□ -1.71
SNRNP27-205ENST00000488986 SLC16A2P36021 539 aa4.35□□□□□ -1.71
SNRNP27-205ENST00000488986 MCM2P49736 904 aa4.35□□□□□ -1.71
SNRNP27-205ENST00000488986 RBM5P52756 815 aaKnown RBP eCLIP4.35□□□□□ -1.71
SNRNP27-205ENST00000488986 RHAGQ02094 409 aa4.35□□□□□ -1.71
SNRNP27-205ENST00000488986 PDCLQ13371 301 aa4.35□□□□□ -1.71
SNRNP27-205ENST00000488986 PRKG1Q13976 671 aa4.35□□□□□ -1.71
SNRNP27-205ENST00000488986 GXYLT1Q4G148 440 aa4.35□□□□□ -1.71
SNRNP27-205ENST00000488986 ENTPD8Q5MY95 495 aa4.35□□□□□ -1.71
SNRNP27-205ENST00000488986 C10orf62Q5T681 223 aaPredicted RBP4.35□□□□□ -1.71
SNRNP27-205ENST00000488986 LCE1EQ5T753 118 aa4.35□□□□□ -1.71
SNRNP27-205ENST00000488986 FAM171A1Q5VUB5 890 aa4.35□□□□□ -1.71
SNRNP27-205ENST00000488986 DLK2Q6UY11 383 aa4.35□□□□□ -1.71
SNRNP27-205ENST00000488986 KDELC2Q7Z4H8 507 aa4.35□□□□□ -1.71
SNRNP27-205ENST00000488986 VPS52Q8N1B4 723 aa4.35□□□□□ -1.71
SNRNP27-205ENST00000488986 SLC25A41Q8N5S1 370 aa4.35□□□□□ -1.71
SNRNP27-205ENST00000488986 MYCT1Q8N699 235 aa4.35□□□□□ -1.71
SNRNP27-205ENST00000488986 PTGR2Q8N8N7 351 aaPredicted RBP4.35□□□□□ -1.71
SNRNP27-205ENST00000488986 TRAPPC12Q8WVT3 735 aa4.35□□□□□ -1.71
SNRNP27-205ENST00000488986 MSI2Q96DH6 328 aaKnown RBP4.35□□□□□ -1.71
SNRNP27-205ENST00000488986 DDX23Q9BUQ8 820 aaKnown RBP4.35□□□□□ -1.71
SNRNP27-205ENST00000488986 HDHD5Q9BXW7 423 aa4.35□□□□□ -1.71
SNRNP27-205ENST00000488986 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.35□□□□□ -1.71
SNRNP27-205ENST00000488986 HIPK2Q9H2X6 1198 aa4.35□□□□□ -1.71
SNRNP27-205ENST00000488986 ACTR5Q9H9F9 607 aaPredicted RBP4.35□□□□□ -1.71
SNRNP27-205ENST00000488986 RNF146Q9NTX7 359 aa4.35□□□□□ -1.71
SNRNP27-205ENST00000488986 TCRBV7S3A2A0A539 114 aa4.34□□□□□ -1.71
SNRNP27-205ENST00000488986 GAGE12JA6NER3 117 aa4.34□□□□□ -1.71
SNRNP27-205ENST00000488986 H0YGN5 161 aa4.34□□□□□ -1.71
SNRNP27-205ENST00000488986 GTPBP1O00178 669 aaKnown RBP4.34□□□□□ -1.71
SNRNP27-205ENST00000488986 SYN3O14994 580 aa4.34□□□□□ -1.71
SNRNP27-205ENST00000488986 SMAD6O43541 496 aaKnown RBP4.34□□□□□ -1.71
SNRNP27-205ENST00000488986 LDHAP00338 332 aaKnown RBP4.34□□□□□ -1.71
SNRNP27-205ENST00000488986 IFNA2P01563 188 aa4.34□□□□□ -1.71
SNRNP27-205ENST00000488986 POLD2P49005 469 aa4.34□□□□□ -1.71
SNRNP27-205ENST00000488986 AARSP49588 968 aaKnown RBP eCLIP4.34□□□□□ -1.71
SNRNP27-205ENST00000488986 DCTN1Q14203 1278 aa4.34□□□□□ -1.71
SNRNP27-205ENST00000488986 C5orf22Q49AR2 442 aa4.34□□□□□ -1.71
SNRNP27-205ENST00000488986 NUGGCQ68CJ6 796 aa4.34□□□□□ -1.71
SNRNP27-205ENST00000488986 TTLL5Q6EMB2 1281 aa4.34□□□□□ -1.71
SNRNP27-205ENST00000488986 ZNF549Q6P9A3 640 aa4.34□□□□□ -1.71
SNRNP27-205ENST00000488986 AAGABQ6PD74 315 aa4.34□□□□□ -1.71
SNRNP27-205ENST00000488986 SYT13Q7L8C5 426 aa4.34□□□□□ -1.71
SNRNP27-205ENST00000488986 GALNT15Q8N3T1 639 aa4.34□□□□□ -1.71
SNRNP27-205ENST00000488986 RBMXL3Q8N7X1 1067 aaKnown RBP4.34□□□□□ -1.71
SNRNP27-205ENST00000488986 FAM110DQ8TAY7 271 aaPredicted RBP4.34□□□□□ -1.71
SNRNP27-205ENST00000488986 CCT6BQ92526 530 aa4.34□□□□□ -1.71
SNRNP27-205ENST00000488986 CAMK1GQ96NX5 476 aa4.34□□□□□ -1.71
SNRNP27-205ENST00000488986 IFT27Q9BW83 186 aa4.34□□□□□ -1.71
SNRNP27-205ENST00000488986 CLPBQ9H078 707 aa4.34□□□□□ -1.71
SNRNP27-205ENST00000488986 RBM38Q9H0Z9 239 aaKnown RBP4.34□□□□□ -1.71
SNRNP27-205ENST00000488986 ABHD16BQ9H3Z7 469 aa4.34□□□□□ -1.71
SNRNP27-205ENST00000488986 PNRC2Q9NPJ4 139 aaKnown RBP4.34□□□□□ -1.71
SNRNP27-205ENST00000488986 TBC1D14Q9P2M4 693 aa4.34□□□□□ -1.71
SNRNP27-205ENST00000488986 PROCRQ9UNN8 238 aa4.34□□□□□ -1.71
SNRNP27-205ENST00000488986 SLC4A4Q9Y6R1 1079 aa4.34□□□□□ -1.71
SNRNP27-205ENST00000488986 NPIPB13A6NJU9 1138 aa4.33□□□□□ -1.72
SNRNP27-205ENST00000488986 NPIPB5A8MRT5 1133 aa4.33□□□□□ -1.72
SNRNP27-205ENST00000488986 NPIPB4C9JG80 1138 aa4.33□□□□□ -1.72
SNRNP27-205ENST00000488986 IPO5O00410 1097 aaKnown RBP4.33□□□□□ -1.72
SNRNP27-205ENST00000488986 TFRCP02786 760 aaKnown RBP4.33□□□□□ -1.72
SNRNP27-205ENST00000488986 KLKB1P03952 638 aa4.33□□□□□ -1.72
SNRNP27-205ENST00000488986 CYP4B1P13584 511 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms