RNA–Protein interactions for RNA: ENST00000488927.2

HDAC7-224, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-224ENST00000488927 KCNF1Q9H3M0 494 aa16.37■□□□□ 0.21
HDAC7-224ENST00000488927 SPATA6Q9NWH7 488 aaPredicted RBP16.37■□□□□ 0.21
HDAC7-224ENST00000488927 TRIM10Q9UDY6 481 aa16.37■□□□□ 0.21
HDAC7-224ENST00000488927 MMP17Q9ULZ9 603 aa16.37■□□□□ 0.21
HDAC7-224ENST00000488927 HPCAL4Q9UM19 191 aa16.37■□□□□ 0.21
HDAC7-224ENST00000488927 OR51B4Q9Y5P0 310 aa16.37■□□□□ 0.21
HDAC7-224ENST00000488927 LRRD1A4D1F6 860 aa16.36■□□□□ 0.21
HDAC7-224ENST00000488927 MIF4GDA9UHW6 222 aaKnown RBP16.36■□□□□ 0.21
HDAC7-224ENST00000488927 PALMO75781 387 aa16.36■□□□□ 0.21
HDAC7-224ENST00000488927 PAPSS2O95340 614 aaPredicted RBP16.36■□□□□ 0.21
HDAC7-224ENST00000488927 KLF8O95600 359 aaPredicted RBP16.36■□□□□ 0.21
HDAC7-224ENST00000488927 CHRM1P11229 460 aaPredicted RBP16.36■□□□□ 0.21
HDAC7-224ENST00000488927 KDELR1P24390 212 aa16.36■□□□□ 0.21
HDAC7-224ENST00000488927 CXCL12P48061 93 aa16.36■□□□□ 0.21
HDAC7-224ENST00000488927 GEMIN4P57678 1058 aaKnown RBP16.36■□□□□ 0.21
HDAC7-224ENST00000488927 ENPP2Q13822 863 aa16.36■□□□□ 0.21
HDAC7-224ENST00000488927 GAS6Q14393 721 aa16.36■□□□□ 0.21
HDAC7-224ENST00000488927 ATP13A4Q4VNC1 1196 aa16.36■□□□□ 0.21
HDAC7-224ENST00000488927 EMC10Q5UCC4 262 aa16.36■□□□□ 0.21
HDAC7-224ENST00000488927 RETSATQ6NUM9 610 aa16.36■□□□□ 0.21
HDAC7-224ENST00000488927 TMCO3Q6UWJ1 677 aa16.36■□□□□ 0.21
HDAC7-224ENST00000488927 PEX26Q7Z412 305 aa16.36■□□□□ 0.21
HDAC7-224ENST00000488927 C1orf210Q8IVY1 113 aa16.36■□□□□ 0.21
HDAC7-224ENST00000488927 KATNAL2Q8IYT4 538 aa16.36■□□□□ 0.21
HDAC7-224ENST00000488927 ALLCQ8N6M5 410 aa16.36■□□□□ 0.21
HDAC7-224ENST00000488927 TXNDC5Q8NBS9 432 aaKnown RBP16.36■□□□□ 0.21
HDAC7-224ENST00000488927 OR52K2Q8NGK3 314 aa16.36■□□□□ 0.21
HDAC7-224ENST00000488927 ALG14Q96F25 216 aa16.36■□□□□ 0.21
HDAC7-224ENST00000488927 ZNF830Q96NB3 372 aaPredicted RBP16.36■□□□□ 0.21
HDAC7-224ENST00000488927 GABRG3Q99928 467 aa16.36■□□□□ 0.21
HDAC7-224ENST00000488927 GOLPH3Q9H4A6 298 aa16.36■□□□□ 0.21
HDAC7-224ENST00000488927 ATP13A1Q9HD20 1204 aa16.36■□□□□ 0.21
HDAC7-224ENST00000488927 LZTFL1Q9NQ48 299 aa16.36■□□□□ 0.21
HDAC7-224ENST00000488927 SLC25A13Q9UJS0 675 aa16.36■□□□□ 0.21
HDAC7-224ENST00000488927 AMFRQ9UKV5 643 aa16.36■□□□□ 0.21
HDAC7-224ENST00000488927 SLC8A2Q9UPR5 921 aa16.36■□□□□ 0.21
HDAC7-224ENST00000488927 HYOU1Q9Y4L1 999 aa16.36■□□□□ 0.21
HDAC7-224ENST00000488927 MIA3Q5JRA6 1907 aa16.36■□□□□ 0.21
HDAC7-224ENST00000488927 A0A0D9SEW6 157 aa16.35■□□□□ 0.21
HDAC7-224ENST00000488927 A0A0U1RQJ8 604 aa16.35■□□□□ 0.21
HDAC7-224ENST00000488927 ZSCAN5CA6NGD5 496 aaPredicted RBP16.35■□□□□ 0.21
HDAC7-224ENST00000488927 LAMTOR5O43504 91 aa16.35■□□□□ 0.21
HDAC7-224ENST00000488927 KRT1P04264 644 aa16.35■□□□□ 0.21
HDAC7-224ENST00000488927 TNNT1P13805 278 aa16.35■□□□□ 0.21
HDAC7-224ENST00000488927 IL4RP24394 825 aa16.35■□□□□ 0.21
HDAC7-224ENST00000488927 CTNNA1P35221 906 aaKnown RBP16.35■□□□□ 0.21
HDAC7-224ENST00000488927 DGKEP52429 567 aa16.35■□□□□ 0.21
HDAC7-224ENST00000488927 SLC20A2Q08357 652 aa16.35■□□□□ 0.21
HDAC7-224ENST00000488927 ZNF234Q14588 700 aa16.35■□□□□ 0.21
HDAC7-224ENST00000488927 PTPRNQ16849 979 aa16.35■□□□□ 0.21
HDAC7-224ENST00000488927 FNDC3BQ53EP0 1204 aaKnown RBP16.35■□□□□ 0.21
HDAC7-224ENST00000488927 ANKRD20A8PQ5CZ79 823 aa16.35■□□□□ 0.21
HDAC7-224ENST00000488927 IL31Q6EBC2 164 aa16.35■□□□□ 0.21
HDAC7-224ENST00000488927 SERPINA13PQ6UXR4 307 aa16.35■□□□□ 0.21
HDAC7-224ENST00000488927 RCOR2Q8IZ40 523 aa16.35■□□□□ 0.21
HDAC7-224ENST00000488927 UBL4BQ8N7F7 174 aa16.35■□□□□ 0.21
HDAC7-224ENST00000488927 ATRIPQ8WXE1 791 aa16.35■□□□□ 0.21
HDAC7-224ENST00000488927 RAPGEF5Q92565 580 aa16.35■□□□□ 0.21
HDAC7-224ENST00000488927 ARHGEF2Q92974 986 aaKnown RBP16.35■□□□□ 0.21
HDAC7-224ENST00000488927 FAF2Q96CS3 445 aa16.35■□□□□ 0.21
HDAC7-224ENST00000488927 RBM41Q96IZ5 413 aaKnown RBP16.35■□□□□ 0.21
HDAC7-224ENST00000488927 SPON2Q9BUD6 331 aa16.35■□□□□ 0.21
HDAC7-224ENST00000488927 MAK16Q9BXY0 300 aaKnown RBP16.35■□□□□ 0.21
HDAC7-224ENST00000488927 ACE2Q9BYF1 805 aaPredicted RBP16.35■□□□□ 0.21
HDAC7-224ENST00000488927 NDFIP2Q9NV92 336 aa16.35■□□□□ 0.21
HDAC7-224ENST00000488927 KLHL11Q9NVR0 708 aa16.35■□□□□ 0.21
HDAC7-224ENST00000488927 ERVW-1Q9UQF0 538 aa16.35■□□□□ 0.21
HDAC7-224ENST00000488927 PCDHA3Q9Y5H8 950 aa16.35■□□□□ 0.21
HDAC7-224ENST00000488927 STON1Q9Y6Q2 735 aa16.35■□□□□ 0.21
HDAC7-224ENST00000488927 ZDBF2Q9HCK1 2354 aa16.34■□□□□ 0.21
HDAC7-224ENST00000488927 ARHGAP42A6NI28 874 aa16.34■□□□□ 0.21
HDAC7-224ENST00000488927 DCLK1O15075 740 aa16.34■□□□□ 0.21
HDAC7-224ENST00000488927 ZBTB24O43167 697 aaPredicted RBP16.34■□□□□ 0.21
HDAC7-224ENST00000488927 ZRANB2O95218 330 aaKnown RBP eCLIP16.34■□□□□ 0.212e-6■■■■■ 28.9
HDAC7-224ENST00000488927 CD48P09326 243 aa16.34■□□□□ 0.21
HDAC7-224ENST00000488927 HOXB2P14652 356 aa16.34■□□□□ 0.21
HDAC7-224ENST00000488927 CTNNA2P26232 953 aa16.34■□□□□ 0.21
HDAC7-224ENST00000488927 CLCN6P51797 869 aa16.34■□□□□ 0.21
HDAC7-224ENST00000488927 STARD3Q14849 445 aa16.34■□□□□ 0.21
HDAC7-224ENST00000488927 METTL3Q86U44 580 aaKnown RBP16.34■□□□□ 0.21
HDAC7-224ENST00000488927 NT5DC3Q86UY8 548 aa16.34■□□□□ 0.21
HDAC7-224ENST00000488927 CCDC33Q8N5R6 958 aa16.34■□□□□ 0.21
HDAC7-224ENST00000488927 CAMKK1Q8N5S9 505 aa16.34■□□□□ 0.21
HDAC7-224ENST00000488927 TRIM58Q8NG06 486 aa16.34■□□□□ 0.21
HDAC7-224ENST00000488927 OR7D4Q8NG98 312 aa16.34■□□□□ 0.21
HDAC7-224ENST00000488927 EXD1Q8NHP7 514 aa16.34■□□□□ 0.21
HDAC7-224ENST00000488927 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.34■□□□□ 0.21
HDAC7-224ENST00000488927 CYB5D2Q8WUJ1 264 aa16.34■□□□□ 0.21
HDAC7-224ENST00000488927 SORCS1Q8WY21 1168 aa16.34■□□□□ 0.21
HDAC7-224ENST00000488927 PSMB7Q99436 277 aa16.34■□□□□ 0.21
HDAC7-224ENST00000488927 LRRC19Q9H756 370 aa16.34■□□□□ 0.21
HDAC7-224ENST00000488927 POLMQ9NP87 494 aaPredicted RBP16.34■□□□□ 0.21
HDAC7-224ENST00000488927 PRMT8Q9NR22 394 aaPredicted RBP16.34■□□□□ 0.21
HDAC7-224ENST00000488927 SUN2Q9UH99 717 aa16.34■□□□□ 0.21
HDAC7-224ENST00000488927 VPS51Q9UID3 782 aa16.34■□□□□ 0.21
HDAC7-224ENST00000488927 FBXO4Q9UKT5 387 aa16.34■□□□□ 0.21
HDAC7-224ENST00000488927 HCN2Q9UL51 889 aa16.34■□□□□ 0.21
HDAC7-224ENST00000488927 HS3ST2Q9Y278 367 aa16.34■□□□□ 0.21
HDAC7-224ENST00000488927 CAPN6Q9Y6Q1 641 aa16.34■□□□□ 0.21
HDAC7-224ENST00000488927 DOCK4Q8N1I0 1966 aa16.33■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms