RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 PASD1Q8IV76 773 aa18.97■□□□□ 0.63
HDAC6-231ENST00000488905 SAP25Q8TEE9 199 aa18.97■□□□□ 0.63
HDAC6-231ENST00000488905 RNF34Q969K3 372 aa18.97■□□□□ 0.63
HDAC6-231ENST00000488905 PPP1R13BQ96KQ4 1090 aa18.97■□□□□ 0.63
HDAC6-231ENST00000488905 RPRD1AQ96P16 312 aaPredicted RBP18.97■□□□□ 0.63
HDAC6-231ENST00000488905 SLC25A13Q9UJS0 675 aa18.97■□□□□ 0.63
HDAC6-231ENST00000488905 TRABD2BA6NFA1 517 aa18.96■□□□□ 0.63
HDAC6-231ENST00000488905 ENC1O14682 589 aa18.96■□□□□ 0.63
HDAC6-231ENST00000488905 GADD45BO75293 160 aaPredicted RBP18.96■□□□□ 0.63
HDAC6-231ENST00000488905 GRAP2O75791 330 aa18.96■□□□□ 0.63
HDAC6-231ENST00000488905 SLC9A1P19634 815 aa18.96■□□□□ 0.63
HDAC6-231ENST00000488905 VASPP50552 380 aaPredicted RBP18.96■□□□□ 0.63
HDAC6-231ENST00000488905 NXPH1P58417 271 aa18.96■□□□□ 0.63
HDAC6-231ENST00000488905 APBA1Q02410 837 aa18.96■□□□□ 0.63
HDAC6-231ENST00000488905 SLC45A4Q5BKX6 768 aa18.96■□□□□ 0.63
HDAC6-231ENST00000488905 EFHC1Q5JVL4 640 aa18.96■□□□□ 0.63
HDAC6-231ENST00000488905 NAPEPLDQ6IQ20 393 aa18.96■□□□□ 0.63
HDAC6-231ENST00000488905 OLFML1Q6UWY5 402 aa18.96■□□□□ 0.63
HDAC6-231ENST00000488905 GBP6Q6ZN66 633 aa18.96■□□□□ 0.63
HDAC6-231ENST00000488905 FAM183BPQ6ZVS7 135 aa18.96■□□□□ 0.63
HDAC6-231ENST00000488905 DSG4Q86SJ6 1040 aa18.96■□□□□ 0.63
HDAC6-231ENST00000488905 WDTC1Q8N5D0 677 aa18.96■□□□□ 0.63
HDAC6-231ENST00000488905 OR8D1Q8WZ84 308 aa18.96■□□□□ 0.63
HDAC6-231ENST00000488905 SHC3Q92529 594 aa18.96■□□□□ 0.63
HDAC6-231ENST00000488905 CNDP2Q96KP4 475 aaKnown RBP18.96■□□□□ 0.63
HDAC6-231ENST00000488905 RWDD2AQ9UIY3 292 aa18.96■□□□□ 0.63
HDAC6-231ENST00000488905 PCDHGC3Q9UN70 934 aa18.96■□□□□ 0.63
HDAC6-231ENST00000488905 PCDHGA1Q9Y5H4 931 aa18.96■□□□□ 0.63
HDAC6-231ENST00000488905 TDRD6O60522 2096 aaKnown RBP18.96■□□□□ 0.63
HDAC6-231ENST00000488905 TBC1D3DA0A087WVF3 549 aa18.95■□□□□ 0.62
HDAC6-231ENST00000488905 TBC1D3IA0A087WXS9 549 aa18.95■□□□□ 0.62
HDAC6-231ENST00000488905 TBC1D3EA0A087X179 549 aa18.95■□□□□ 0.62
HDAC6-231ENST00000488905 TBC1D3KA0A087X1G2 549 aa18.95■□□□□ 0.62
HDAC6-231ENST00000488905 TBC1D3FA6NER0 549 aaPredicted RBP18.95■□□□□ 0.62
HDAC6-231ENST00000488905 TBC1D3LB9A6J9 549 aa18.95■□□□□ 0.62
HDAC6-231ENST00000488905 CBX4O00257 560 aa18.95■□□□□ 0.62
HDAC6-231ENST00000488905 PLK4O00444 970 aa18.95■□□□□ 0.62
HDAC6-231ENST00000488905 SLC7A4O43246 635 aa18.95■□□□□ 0.62
HDAC6-231ENST00000488905 PLRG1O43660 514 aaKnown RBP18.95■□□□□ 0.62
HDAC6-231ENST00000488905 RTN2O75298 545 aa18.95■□□□□ 0.62
HDAC6-231ENST00000488905 DAB1O75553 588 aa18.95■□□□□ 0.62
HDAC6-231ENST00000488905 TBC1D3HP0C7X1 549 aa18.95■□□□□ 0.62
HDAC6-231ENST00000488905 ARRB1P49407 418 aaPredicted RBP18.95■□□□□ 0.62
HDAC6-231ENST00000488905 IRAK1P51617 712 aa18.95■□□□□ 0.62
HDAC6-231ENST00000488905 CYP4F3Q08477 520 aa18.95■□□□□ 0.62
HDAC6-231ENST00000488905 AUHQ13825 339 aaKnown RBP18.95■□□□□ 0.62
HDAC6-231ENST00000488905 EXOC3L4Q17RC7 722 aa18.95■□□□□ 0.62
HDAC6-231ENST00000488905 TBC1D3GQ6DHY5 549 aa18.95■□□□□ 0.62
HDAC6-231ENST00000488905 TBC1D3CQ6IPX1 549 aa18.95■□□□□ 0.62
HDAC6-231ENST00000488905 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.95■□□□□ 0.62
HDAC6-231ENST00000488905 PDZD3Q86UT5 571 aa18.95■□□□□ 0.62
HDAC6-231ENST00000488905 TBC1D3Q8IZP1 549 aaPredicted RBP18.95■□□□□ 0.62
HDAC6-231ENST00000488905 OXR1Q8N573 874 aa18.95■□□□□ 0.62
HDAC6-231ENST00000488905 PDCD7Q8N8D1 485 aaKnown RBP18.95■□□□□ 0.62
HDAC6-231ENST00000488905 C1orf131Q8NDD1 294 aaKnown RBP18.95■□□□□ 0.62
HDAC6-231ENST00000488905 OR52K2Q8NGK3 314 aa18.95■□□□□ 0.62
HDAC6-231ENST00000488905 ALG14Q96F25 216 aa18.95■□□□□ 0.62
HDAC6-231ENST00000488905 NOX5Q96PH1 765 aa18.95■□□□□ 0.62
HDAC6-231ENST00000488905 KDM4CQ9H3R0 1056 aa18.95■□□□□ 0.62
HDAC6-231ENST00000488905 SCUBE2Q9NQ36 999 aa18.95■□□□□ 0.62
HDAC6-231ENST00000488905 SARDHQ9UL12 918 aa18.95■□□□□ 0.62
HDAC6-231ENST00000488905 VANGL2Q9ULK5 521 aa18.95■□□□□ 0.62
HDAC6-231ENST00000488905 GTPBP10A4D1E9 387 aaKnown RBP18.94■□□□□ 0.62
HDAC6-231ENST00000488905 TLR4O00206 839 aa18.94■□□□□ 0.62
HDAC6-231ENST00000488905 ATP9BO43861 1147 aa18.94■□□□□ 0.62
HDAC6-231ENST00000488905 RFPL3O75679 317 aa18.94■□□□□ 0.62
HDAC6-231ENST00000488905 LDOC1O95751 146 aaPredicted RBP18.94■□□□□ 0.62
HDAC6-231ENST00000488905 GGCXP38435 758 aa18.94■□□□□ 0.62
HDAC6-231ENST00000488905 DNAJC3Q13217 504 aa18.94■□□□□ 0.62
HDAC6-231ENST00000488905 NME3Q13232 169 aa18.94■□□□□ 0.62
HDAC6-231ENST00000488905 MTA1Q13330 715 aa18.94■□□□□ 0.62
HDAC6-231ENST00000488905 AGBL4Q5VU57 503 aa18.94■□□□□ 0.62
HDAC6-231ENST00000488905 FAM46CQ5VWP2 391 aa18.94■□□□□ 0.62
HDAC6-231ENST00000488905 C11orf57Q6ZUT1 292 aaPredicted RBP18.94■□□□□ 0.62
HDAC6-231ENST00000488905 Q6ZVU0 165 aa18.94■□□□□ 0.62
HDAC6-231ENST00000488905 SLC26A9Q7LBE3 791 aa18.94■□□□□ 0.62
HDAC6-231ENST00000488905 TMPRSS12Q86WS5 348 aa18.94■□□□□ 0.62
HDAC6-231ENST00000488905 CREBRFQ8IUR6 639 aa18.94■□□□□ 0.62
HDAC6-231ENST00000488905 PPP1R9BQ96SB3 815 aa18.94■□□□□ 0.62
HDAC6-231ENST00000488905 FEM1AQ9BSK4 669 aa18.94■□□□□ 0.62
HDAC6-231ENST00000488905 ERVMER34-1Q9H9K5 563 aa18.94■□□□□ 0.62
HDAC6-231ENST00000488905 ARHGAP20Q9P2F6 1191 aa18.94■□□□□ 0.62
HDAC6-231ENST00000488905 VPS28Q9UK41 221 aa18.94■□□□□ 0.62
HDAC6-231ENST00000488905 HS3ST4Q9Y661 456 aa18.94■□□□□ 0.62
HDAC6-231ENST00000488905 TRPM6Q9BX84 2022 aa18.93■□□□□ 0.62
HDAC6-231ENST00000488905 E9PAM4 449 aa18.93■□□□□ 0.62
HDAC6-231ENST00000488905 C1QTNF3-AMACRE9PGA6 284 aa18.93■□□□□ 0.62
HDAC6-231ENST00000488905 ALOX15BO15296 676 aa18.93■□□□□ 0.62
HDAC6-231ENST00000488905 ERBB2P04626 1255 aa18.93■□□□□ 0.62
HDAC6-231ENST00000488905 MAT2AP31153 395 aaKnown RBP18.93■□□□□ 0.62
HDAC6-231ENST00000488905 HNF1BP35680 557 aa18.93■□□□□ 0.62
HDAC6-231ENST00000488905 NUDT1P36639 197 aa18.93■□□□□ 0.62
HDAC6-231ENST00000488905 ACADVLP49748 655 aa18.93■□□□□ 0.62
HDAC6-231ENST00000488905 CNTN1Q12860 1018 aa18.93■□□□□ 0.62
HDAC6-231ENST00000488905 ACCSLQ4AC99 568 aa18.93■□□□□ 0.62
HDAC6-231ENST00000488905 PTPN20Q4JDL3 420 aa18.93■□□□□ 0.62
HDAC6-231ENST00000488905 SFMBT2Q5VUG0 894 aa18.93■□□□□ 0.62
HDAC6-231ENST00000488905 OTUD1Q5VV17 481 aaPredicted RBP18.93■□□□□ 0.62
HDAC6-231ENST00000488905 OR6B2Q6IFH4 312 aa18.93■□□□□ 0.62
HDAC6-231ENST00000488905 PRPF39Q86UA1 669 aaKnown RBP18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms