RNA–Protein interactions for RNA: ENST00000488860.1

TRAIP-209, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 326 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-209ENST00000488860 RASGEF1CQ8N431 466 aa12.62□□□□□ -0.39
TRAIP-209ENST00000488860 LRRN4Q8WUT4 740 aa12.62□□□□□ -0.39
TRAIP-209ENST00000488860 MAIP1Q8WWC4 291 aa12.62□□□□□ -0.39
TRAIP-209ENST00000488860 ARHGEF2Q92974 986 aaKnown RBP12.62□□□□□ -0.39
TRAIP-209ENST00000488860 PNKPQ96T60 521 aa12.62□□□□□ -0.39
TRAIP-209ENST00000488860 NAP1L3Q99457 506 aaPredicted RBP12.62□□□□□ -0.39
TRAIP-209ENST00000488860 SLC2A11Q9BYW1 496 aa12.62□□□□□ -0.39
TRAIP-209ENST00000488860 KLC2Q9H0B6 622 aa12.62□□□□□ -0.39
TRAIP-209ENST00000488860 RETREG1Q9H6L5 497 aa12.62□□□□□ -0.39
TRAIP-209ENST00000488860 NOL6Q9H6R4 1146 aaKnown RBP12.62□□□□□ -0.39
TRAIP-209ENST00000488860 LRRC19Q9H756 370 aa12.62□□□□□ -0.39
TRAIP-209ENST00000488860 C8orf33Q9H7E9 229 aaPredicted RBP12.62□□□□□ -0.39
TRAIP-209ENST00000488860 PRDM16Q9HAZ2 1276 aa12.62□□□□□ -0.39
TRAIP-209ENST00000488860 SP110Q9HB58 689 aa12.62□□□□□ -0.39
TRAIP-209ENST00000488860 TRPV5Q9NQA5 729 aa12.62□□□□□ -0.39
TRAIP-209ENST00000488860 DTLQ9NZJ0 730 aa12.62□□□□□ -0.39
TRAIP-209ENST00000488860 EFR3BQ9Y2G0 817 aa12.62□□□□□ -0.39
TRAIP-209ENST00000488860 R3HDM2Q9Y2K5 976 aaKnown RBP12.62□□□□□ -0.39
TRAIP-209ENST00000488860 H7C0C1 242 aa12.61□□□□□ -0.39
TRAIP-209ENST00000488860 CBX4O00257 560 aa12.61□□□□□ -0.39
TRAIP-209ENST00000488860 PPP1R12AO14974 1030 aaPredicted RBP12.61□□□□□ -0.39
TRAIP-209ENST00000488860 MCF2LO15068 1137 aa12.61□□□□□ -0.39
TRAIP-209ENST00000488860 APODP05090 189 aa12.61□□□□□ -0.39
TRAIP-209ENST00000488860 GLDCP23378 1020 aa12.61□□□□□ -0.39
TRAIP-209ENST00000488860 ETFBP38117 255 aa12.61□□□□□ -0.39
TRAIP-209ENST00000488860 PAFAH1B1P43034 410 aa12.61□□□□□ -0.39
TRAIP-209ENST00000488860 ATP5OP48047 213 aa12.61□□□□□ -0.39
TRAIP-209ENST00000488860 YBEYP58557 167 aaPredicted RBP12.61□□□□□ -0.39
TRAIP-209ENST00000488860 GALNT2Q10471 571 aa12.61□□□□□ -0.39
TRAIP-209ENST00000488860 SLC10A2Q12908 348 aaPredicted RBP12.61□□□□□ -0.39
TRAIP-209ENST00000488860 KLF1Q13351 362 aaPredicted RBP12.61□□□□□ -0.39
TRAIP-209ENST00000488860 NOMO1Q15155 1222 aa12.61□□□□□ -0.39
TRAIP-209ENST00000488860 PON2Q15165 354 aa12.61□□□□□ -0.39
TRAIP-209ENST00000488860 MLF2Q15773 248 aaPredicted RBP12.61□□□□□ -0.39
TRAIP-209ENST00000488860 PLEKHG6Q3KR16 790 aa12.61□□□□□ -0.39
TRAIP-209ENST00000488860 TXNDC11Q6PKC3 985 aa12.61□□□□□ -0.39
TRAIP-209ENST00000488860 ZNF783Q6ZMS7 281 aa12.61□□□□□ -0.39
TRAIP-209ENST00000488860 ARHGAP36Q6ZRI8 547 aa12.61□□□□□ -0.39
TRAIP-209ENST00000488860 B4GALNT4Q76KP1 1039 aa12.61□□□□□ -0.39
TRAIP-209ENST00000488860 ZC3H18Q86VM9 953 aaKnown RBP12.61□□□□□ -0.39
TRAIP-209ENST00000488860 RALGPS2Q86X27 583 aaPredicted RBP12.61□□□□□ -0.39
TRAIP-209ENST00000488860 TERB1Q8NA31 727 aa12.61□□□□□ -0.39
TRAIP-209ENST00000488860 TTC13Q8NBP0 860 aa12.61□□□□□ -0.39
TRAIP-209ENST00000488860 CCNYQ8ND76 341 aa12.61□□□□□ -0.39
TRAIP-209ENST00000488860 ACTL9Q8TC94 416 aa12.61□□□□□ -0.39
TRAIP-209ENST00000488860 ACTRT1Q8TDG2 376 aa12.61□□□□□ -0.39
TRAIP-209ENST00000488860 WFIKKN2Q8TEU8 576 aa12.61□□□□□ -0.39
TRAIP-209ENST00000488860 C1orf54Q8WWF1 131 aa12.61□□□□□ -0.39
TRAIP-209ENST00000488860 ATG4AQ8WYN0 398 aa12.61□□□□□ -0.39
TRAIP-209ENST00000488860 EXOC4Q96A65 974 aa12.61□□□□□ -0.39
TRAIP-209ENST00000488860 P2RY13Q9BPV8 354 aa12.61□□□□□ -0.39
TRAIP-209ENST00000488860 AP1M1Q9BXS5 423 aa12.61□□□□□ -0.39
TRAIP-209ENST00000488860 CIPCQ9C0C6 399 aa12.61□□□□□ -0.39
TRAIP-209ENST00000488860 MAGEH1Q9H213 219 aa12.61□□□□□ -0.39
TRAIP-209ENST00000488860 CD320Q9NPF0 282 aa12.61□□□□□ -0.39
TRAIP-209ENST00000488860 HPCAL4Q9UM19 191 aa12.61□□□□□ -0.39
TRAIP-209ENST00000488860 GOLGA6L10A0A0M3HER8 536 aa12.6□□□□□ -0.39
TRAIP-209ENST00000488860 SNAP91O60641 907 aa12.6□□□□□ -0.39
TRAIP-209ENST00000488860 KAT7O95251 611 aa12.6□□□□□ -0.39
TRAIP-209ENST00000488860 CISD3P0C7P0 127 aa12.6□□□□□ -0.39
TRAIP-209ENST00000488860 POLR2EP19388 210 aaKnown RBP12.6□□□□□ -0.39
TRAIP-209ENST00000488860 MX2P20592 715 aa12.6□□□□□ -0.39
TRAIP-209ENST00000488860 EIF2DP41214 584 aaKnown RBP12.6□□□□□ -0.39
TRAIP-209ENST00000488860 GARSP41250 739 aaKnown RBP12.6□□□□□ -0.39
TRAIP-209ENST00000488860 EIF3EP60228 445 aaKnown RBP12.6□□□□□ -0.39
TRAIP-209ENST00000488860 MESP2Q0VG99 397 aa12.6□□□□□ -0.39
TRAIP-209ENST00000488860 AP1B1Q10567 949 aa12.6□□□□□ -0.39
TRAIP-209ENST00000488860 SERINC3Q13530 473 aa12.6□□□□□ -0.39
TRAIP-209ENST00000488860 SNX1Q13596 522 aa12.6□□□□□ -0.39
TRAIP-209ENST00000488860 SLC12A1Q13621 1099 aa12.6□□□□□ -0.39
TRAIP-209ENST00000488860 PDK1Q15118 436 aa12.6□□□□□ -0.39
TRAIP-209ENST00000488860 PREPLQ4J6C6 727 aaPredicted RBP12.6□□□□□ -0.39
TRAIP-209ENST00000488860 SLC44A4Q53GD3 710 aa12.6□□□□□ -0.39
TRAIP-209ENST00000488860 AFMIDQ63HM1 303 aa12.6□□□□□ -0.39
TRAIP-209ENST00000488860 MBLAC2Q68D91 279 aa12.6□□□□□ -0.39
TRAIP-209ENST00000488860 LEKR1Q6ZMV7 388 aa12.6□□□□□ -0.39
TRAIP-209ENST00000488860 BZW1Q7L1Q6 419 aaKnown RBP12.6□□□□□ -0.39
TRAIP-209ENST00000488860 CREG2Q8IUH2 290 aa12.6□□□□□ -0.39
TRAIP-209ENST00000488860 SFTPA1Q8IWL2 248 aa12.6□□□□□ -0.39
TRAIP-209ENST00000488860 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.6□□□□□ -0.39
TRAIP-209ENST00000488860 DCAF4L2Q8NA75 395 aa12.6□□□□□ -0.39
TRAIP-209ENST00000488860 MSANTD3Q96H12 275 aa12.6□□□□□ -0.39
TRAIP-209ENST00000488860 UHRF1Q96T88 793 aaPredicted RBP12.6□□□□□ -0.39
TRAIP-209ENST00000488860 FEM1AQ9BSK4 669 aa12.6□□□□□ -0.39
TRAIP-209ENST00000488860 ARHGEF3Q9NR81 526 aa12.6□□□□□ -0.39
TRAIP-209ENST00000488860 SLC25A13Q9UJS0 675 aa12.6□□□□□ -0.39
TRAIP-209ENST00000488860 FBXO10Q9UK96 956 aa12.6□□□□□ -0.39
TRAIP-209ENST00000488860 INTS6Q9UL03 887 aaKnown RBP12.6□□□□□ -0.39
TRAIP-209ENST00000488860 NDRG2Q9UN36 371 aaKnown RBP12.6□□□□□ -0.39
TRAIP-209ENST00000488860 RAD54BQ9Y620 910 aa12.6□□□□□ -0.39
TRAIP-209ENST00000488860 MYO18AQ92614 2054 aaKnown RBP12.59□□□□□ -0.39
TRAIP-209ENST00000488860 TBC1D3BA6NDS4 549 aa12.59□□□□□ -0.39
TRAIP-209ENST00000488860 KRIT1O00522 736 aa12.59□□□□□ -0.39
TRAIP-209ENST00000488860 CTSOP43234 321 aaPredicted RBP12.59□□□□□ -0.39
TRAIP-209ENST00000488860 NR2C2P49116 596 aa12.59□□□□□ -0.39
TRAIP-209ENST00000488860 GALK1P51570 392 aa12.59□□□□□ -0.39
TRAIP-209ENST00000488860 SEC13P55735 322 aa12.59□□□□□ -0.39
TRAIP-209ENST00000488860 CKAP4Q07065 602 aaKnown RBP12.59□□□□□ -0.39
TRAIP-209ENST00000488860 DMC1Q14565 340 aa12.59□□□□□ -0.39
TRAIP-209ENST00000488860 SIX1Q15475 284 aaPredicted RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms