RNA–Protein interactions for RNA: ENST00000488801.5

PTCD3-217, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-217ENST00000488801 PCDHA13Q9Y5I0 950 aa19.14■□□□□ 0.65
PTCD3-217ENST00000488801 RAD54BQ9Y620 910 aa19.14■□□□□ 0.65
PTCD3-217ENST00000488801 ZNF292O60281 2723 aa19.13■□□□□ 0.65
PTCD3-217ENST00000488801 A0A0A6YYK5 440 aaPredicted RBP19.13■□□□□ 0.65
PTCD3-217ENST00000488801 FGF10O15520 208 aaPredicted RBP19.13■□□□□ 0.65
PTCD3-217ENST00000488801 ZMPSTE24O75844 475 aa19.13■□□□□ 0.65
PTCD3-217ENST00000488801 RARAP10276 462 aa19.13■□□□□ 0.65
PTCD3-217ENST00000488801 GABRG2P18507 467 aa19.13■□□□□ 0.65
PTCD3-217ENST00000488801 ARHGAP25P42331 645 aa19.13■□□□□ 0.65
PTCD3-217ENST00000488801 MAGEA1P43355 309 aa19.13■□□□□ 0.65
PTCD3-217ENST00000488801 HCAR3P49019 387 aa19.13■□□□□ 0.65
PTCD3-217ENST00000488801 COPAP53621 1224 aa19.13■□□□□ 0.65
PTCD3-217ENST00000488801 ECT2LQ008S8 904 aa19.13■□□□□ 0.65
PTCD3-217ENST00000488801 DPYSQ14117 519 aa19.13■□□□□ 0.65
PTCD3-217ENST00000488801 BOLA3Q53S33 107 aa19.13■□□□□ 0.65
PTCD3-217ENST00000488801 ZC3H14Q6PJT7 736 aaKnown RBP19.13■□□□□ 0.65
PTCD3-217ENST00000488801 SERPINA13PQ6UXR4 307 aa19.13■□□□□ 0.65
PTCD3-217ENST00000488801 TSC1Q92574 1164 aa19.13■□□□□ 0.65
PTCD3-217ENST00000488801 ATOH1Q92858 354 aaPredicted RBP19.13■□□□□ 0.65
PTCD3-217ENST00000488801 PPP1R9BQ96SB3 815 aa19.13■□□□□ 0.65
PTCD3-217ENST00000488801 ACE2Q9BYF1 805 aaPredicted RBP19.13■□□□□ 0.65
PTCD3-217ENST00000488801 DHX35Q9H5Z1 703 aaKnown RBP19.13■□□□□ 0.65
PTCD3-217ENST00000488801 POLMQ9NP87 494 aaPredicted RBP19.13■□□□□ 0.65
PTCD3-217ENST00000488801 HS3ST2Q9Y278 367 aa19.13■□□□□ 0.65
PTCD3-217ENST00000488801 CACNA1EQ15878 2313 aa19.13■□□□□ 0.65
PTCD3-217ENST00000488801 EP300Q09472 2414 aaPredicted RBP19.13■□□□□ 0.65
PTCD3-217ENST00000488801 GVINP1Q7Z2Y8 2422 aa19.13■□□□□ 0.65
PTCD3-217ENST00000488801 LRRK1Q38SD2 2015 aa19.12■□□□□ 0.65
PTCD3-217ENST00000488801 TCRBV21S2A2A0A5A6 115 aa19.12■□□□□ 0.65
PTCD3-217ENST00000488801 RCCD1A6NED2 376 aa19.12■□□□□ 0.65
PTCD3-217ENST00000488801 AXIN1O15169 862 aa19.12■□□□□ 0.65
PTCD3-217ENST00000488801 HLA-EP13747 358 aa19.12■□□□□ 0.65
PTCD3-217ENST00000488801 EPHB2P29323 1055 aa19.12■□□□□ 0.65
PTCD3-217ENST00000488801 PXNP49023 591 aaPredicted RBP19.12■□□□□ 0.65
PTCD3-217ENST00000488801 STK19P49842 368 aaPredicted RBP19.12■□□□□ 0.65
PTCD3-217ENST00000488801 ARSEP51690 589 aa19.12■□□□□ 0.65
PTCD3-217ENST00000488801 GSDMDP57764 484 aa19.12■□□□□ 0.65
PTCD3-217ENST00000488801 TPI1P60174 286 aa19.12■□□□□ 0.65
PTCD3-217ENST00000488801 GNA12Q03113 381 aa19.12■□□□□ 0.65
PTCD3-217ENST00000488801 SMTNL2Q2TAL5 461 aa19.12■□□□□ 0.65
PTCD3-217ENST00000488801 HNRNPA1L2Q32P51 320 aaKnown RBP19.12■□□□□ 0.65
PTCD3-217ENST00000488801 FNDC3BQ53EP0 1204 aaKnown RBP19.12■□□□□ 0.65
PTCD3-217ENST00000488801 SDE2Q6IQ49 451 aa19.12■□□□□ 0.65
PTCD3-217ENST00000488801 ANO7Q6IWH7 933 aa19.12■□□□□ 0.65
PTCD3-217ENST00000488801 RWDD4Q6NW29 188 aaKnown RBP19.12■□□□□ 0.65
PTCD3-217ENST00000488801 RFX8Q6ZV50 586 aa19.12■□□□□ 0.65
PTCD3-217ENST00000488801 UMODL1-AS1Q8N2C9 162 aa19.12■□□□□ 0.65
PTCD3-217ENST00000488801 OR7D4Q8NG98 312 aa19.12■□□□□ 0.65
PTCD3-217ENST00000488801 FRS2Q8WU20 508 aa19.12■□□□□ 0.65
PTCD3-217ENST00000488801 KLC2Q9H0B6 622 aa19.12■□□□□ 0.65
PTCD3-217ENST00000488801 EPC1Q9H2F5 836 aa19.12■□□□□ 0.65
PTCD3-217ENST00000488801 VPS51Q9UID3 782 aa19.12■□□□□ 0.65
PTCD3-217ENST00000488801 VPS28Q9UK41 221 aa19.12■□□□□ 0.65
PTCD3-217ENST00000488801 PLA2G4CQ9UP65 541 aa19.12■□□□□ 0.65
PTCD3-217ENST00000488801 R4GN57 208 aa19.12■□□□□ 0.65
PTCD3-217ENST00000488801 WDR87Q6ZQQ6 2873 aa19.11■□□□□ 0.65
PTCD3-217ENST00000488801 PJA2O43164 708 aa19.11■□□□□ 0.65
PTCD3-217ENST00000488801 ATP9BO43861 1147 aa19.11■□□□□ 0.65
PTCD3-217ENST00000488801 CREB3O43889 395 aa19.11■□□□□ 0.65
PTCD3-217ENST00000488801 GOT1P17174 413 aa19.11■□□□□ 0.65
PTCD3-217ENST00000488801 NDUFV2P19404 249 aa19.11■□□□□ 0.65
PTCD3-217ENST00000488801 CNR2P34972 360 aa19.11■□□□□ 0.65
PTCD3-217ENST00000488801 TAS2R40P59535 323 aa19.11■□□□□ 0.65
PTCD3-217ENST00000488801 STARD3Q14849 445 aa19.11■□□□□ 0.65
PTCD3-217ENST00000488801 SPA17Q15506 151 aa19.11■□□□□ 0.65
PTCD3-217ENST00000488801 KCNT1Q5JUK3 1230 aa19.11■□□□□ 0.65
PTCD3-217ENST00000488801 HEATR6Q6AI08 1181 aaKnown RBP19.11■□□□□ 0.65
PTCD3-217ENST00000488801 ZNF366Q8N895 744 aa19.11■□□□□ 0.65
PTCD3-217ENST00000488801 ARHGEF2Q92974 986 aaKnown RBP19.11■□□□□ 0.65
PTCD3-217ENST00000488801 PHOX2BQ99453 314 aa19.11■□□□□ 0.65
PTCD3-217ENST00000488801 C2orf49Q9BVC5 232 aaPredicted RBP19.11■□□□□ 0.65
PTCD3-217ENST00000488801 MKRN2Q9H000 416 aaKnown RBP19.11■□□□□ 0.65
PTCD3-217ENST00000488801 MUC3BQ9H195 1237 aa19.11■□□□□ 0.65
PTCD3-217ENST00000488801 MAGEH1Q9H213 219 aa19.11■□□□□ 0.65
PTCD3-217ENST00000488801 CATSPERBQ9H7T0 1116 aa19.11■□□□□ 0.65
PTCD3-217ENST00000488801 FBRSQ9HAH7 460 aa19.11■□□□□ 0.65
PTCD3-217ENST00000488801 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.11■□□□□ 0.65
PTCD3-217ENST00000488801 CWC15Q9P013 229 aaKnown RBP19.11■□□□□ 0.65
PTCD3-217ENST00000488801 SLCO3A1Q9UIG8 710 aa19.11■□□□□ 0.65
PTCD3-217ENST00000488801 TFR2Q9UP52 801 aa19.11■□□□□ 0.65
PTCD3-217ENST00000488801 ZFHX2Q9C0A1 2572 aaPredicted RBP19.1■□□□□ 0.65
PTCD3-217ENST00000488801 PLXNA2O75051 1894 aa19.1■□□□□ 0.65
PTCD3-217ENST00000488801 GOLGA6L3A6NEY3 463 aa19.1■□□□□ 0.65
PTCD3-217ENST00000488801 BTNL10A8MVZ5 291 aa19.1■□□□□ 0.65
PTCD3-217ENST00000488801 GOLGA6L6A8MZA4 724 aa19.1■□□□□ 0.65
PTCD3-217ENST00000488801 EEF2KO00418 725 aaKnown RBP19.1■□□□□ 0.65
PTCD3-217ENST00000488801 HRO43593 1189 aa19.1■□□□□ 0.65
PTCD3-217ENST00000488801 SNAP91O60641 907 aa19.1■□□□□ 0.65
PTCD3-217ENST00000488801 ALDH1A2O94788 518 aa19.1■□□□□ 0.65
PTCD3-217ENST00000488801 EPHX1P07099 455 aa19.1■□□□□ 0.65
PTCD3-217ENST00000488801 ETFBP38117 255 aa19.1■□□□□ 0.65
PTCD3-217ENST00000488801 ARF5P84085 180 aa19.1■□□□□ 0.65
PTCD3-217ENST00000488801 AFMIDQ63HM1 303 aa19.1■□□□□ 0.65
PTCD3-217ENST00000488801 POLNQ7Z5Q5 900 aa19.1■□□□□ 0.65
PTCD3-217ENST00000488801 METTL3Q86U44 580 aaKnown RBP19.1■□□□□ 0.65
PTCD3-217ENST00000488801 SH2D3CQ8N5H7 860 aa19.1■□□□□ 0.65
PTCD3-217ENST00000488801 ACRBPQ8NEB7 543 aa19.1■□□□□ 0.65
PTCD3-217ENST00000488801 HMGB4Q8WW32 186 aa19.1■□□□□ 0.65
PTCD3-217ENST00000488801 GAB3Q8WWW8 586 aa19.1■□□□□ 0.65
PTCD3-217ENST00000488801 RPL10LQ96L21 214 aaKnown RBP19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms