RNA–Protein interactions for RNA: ENST00000488767.1

PHF1-210, Transcript of PHD finger protein 1, humanhuman

TSL 3

Gene PHF1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-210ENST00000488767 INVSQ9Y283 1065 aa13.23□□□□□ -0.29
PHF1-210ENST00000488767 PCDHGA5Q9Y5G8 931 aa13.23□□□□□ -0.29
PHF1-210ENST00000488767 FANCMQ8IYD8 2048 aa13.22□□□□□ -0.29
PHF1-210ENST00000488767 CBX4O00257 560 aa13.22□□□□□ -0.29
PHF1-210ENST00000488767 DCLK1O15075 740 aa13.22□□□□□ -0.29
PHF1-210ENST00000488767 DAPK3O43293 454 aa13.22□□□□□ -0.29
PHF1-210ENST00000488767 CREB3O43889 395 aa13.22□□□□□ -0.29
PHF1-210ENST00000488767 RAMP2O60895 175 aa13.22□□□□□ -0.29
PHF1-210ENST00000488767 LRIG2O94898 1065 aa13.22□□□□□ -0.29
PHF1-210ENST00000488767 CYP1A2P05177 515 aa13.22□□□□□ -0.29
PHF1-210ENST00000488767 PCK1P35558 622 aa13.22□□□□□ -0.29
PHF1-210ENST00000488767 CTSOP43234 321 aaPredicted RBP13.22□□□□□ -0.29
PHF1-210ENST00000488767 SSR1P43307 286 aaKnown RBP13.22□□□□□ -0.29
PHF1-210ENST00000488767 IRAK1P51617 712 aa13.22□□□□□ -0.29
PHF1-210ENST00000488767 ZNF75DP51815 510 aa13.22□□□□□ -0.29
PHF1-210ENST00000488767 ZNF135P52742 658 aaPredicted RBP13.22□□□□□ -0.29
PHF1-210ENST00000488767 GEMIN4P57678 1058 aaKnown RBP13.22□□□□□ -0.29
PHF1-210ENST00000488767 TPI1P60174 286 aa13.22□□□□□ -0.29
PHF1-210ENST00000488767 RPL6Q02878 288 aaKnown RBP13.22□□□□□ -0.29
PHF1-210ENST00000488767 GNA12Q03113 381 aa13.22□□□□□ -0.29
PHF1-210ENST00000488767 ERMARDQ5T6L9 678 aa13.22□□□□□ -0.29
PHF1-210ENST00000488767 IL31Q6EBC2 164 aa13.22□□□□□ -0.29
PHF1-210ENST00000488767 ZNF354CQ86Y25 554 aa13.22□□□□□ -0.29
PHF1-210ENST00000488767 ZNF683Q8IZ20 524 aa13.22□□□□□ -0.29
PHF1-210ENST00000488767 ZNF366Q8N895 744 aa13.22□□□□□ -0.29
PHF1-210ENST00000488767 ATP11CQ8NB49 1132 aa13.22□□□□□ -0.29
PHF1-210ENST00000488767 GANCQ8TET4 914 aa13.22□□□□□ -0.29
PHF1-210ENST00000488767 DUSP15Q9H1R2 295 aaPredicted RBP13.22□□□□□ -0.29
PHF1-210ENST00000488767 DHX35Q9H5Z1 703 aaKnown RBP13.22□□□□□ -0.29
PHF1-210ENST00000488767 ATP13A1Q9HD20 1204 aa13.22□□□□□ -0.29
PHF1-210ENST00000488767 PRSS16Q9NQE7 514 aa13.22□□□□□ -0.29
PHF1-210ENST00000488767 TMEM248Q9NWD8 314 aa13.22□□□□□ -0.29
PHF1-210ENST00000488767 PCSK1NQ9UHG2 260 aa13.22□□□□□ -0.29
PHF1-210ENST00000488767 USP18Q9UMW8 372 aa13.22□□□□□ -0.29
PHF1-210ENST00000488767 NENFQ9UMX5 172 aa13.22□□□□□ -0.29
PHF1-210ENST00000488767 NCKAP1Q9Y2A7 1128 aa13.22□□□□□ -0.29
PHF1-210ENST00000488767 VPS13AQ96RL7 3174 aa13.22□□□□□ -0.29
PHF1-210ENST00000488767 DMDP11532 3685 aa13.21□□□□□ -0.29
PHF1-210ENST00000488767 EPN2O95208 641 aa13.21□□□□□ -0.29
PHF1-210ENST00000488767 IPO7O95373 1038 aaKnown RBP13.21□□□□□ -0.29
PHF1-210ENST00000488767 CD6P30203 668 aa13.21□□□□□ -0.29
PHF1-210ENST00000488767 RECQLP46063 649 aaPredicted RBP13.21□□□□□ -0.29
PHF1-210ENST00000488767 DHPSP49366 369 aaPredicted RBP13.21□□□□□ -0.29
PHF1-210ENST00000488767 STK19P49842 368 aaPredicted RBP13.21□□□□□ -0.29
PHF1-210ENST00000488767 VASPP50552 380 aaPredicted RBP13.21□□□□□ -0.29
PHF1-210ENST00000488767 CLCN6P51797 869 aa13.21□□□□□ -0.29
PHF1-210ENST00000488767 GALCP54803 685 aa13.21□□□□□ -0.29
PHF1-210ENST00000488767 OGDHQ02218 1023 aa13.21□□□□□ -0.29
PHF1-210ENST00000488767 CREB5Q02930 508 aa13.21□□□□□ -0.29
PHF1-210ENST00000488767 SLC20A2Q08357 652 aa13.21□□□□□ -0.29
PHF1-210ENST00000488767 ELAVL3Q14576 367 aaKnown RBP13.21□□□□□ -0.29
PHF1-210ENST00000488767 HADHQ16836 314 aaKnown RBP13.21□□□□□ -0.29
PHF1-210ENST00000488767 MAP7D1Q3KQU3 841 aa13.21□□□□□ -0.29
PHF1-210ENST00000488767 RAB6CQ53S08 254 aa13.21□□□□□ -0.29
PHF1-210ENST00000488767 SYCP2LQ5T4T6 812 aa13.21□□□□□ -0.29
PHF1-210ENST00000488767 MANEALQ5VSG8 457 aa13.21□□□□□ -0.29
PHF1-210ENST00000488767 PMS2CLQ68D20 193 aa13.21□□□□□ -0.29
PHF1-210ENST00000488767 CYP2U1Q7Z449 544 aa13.21□□□□□ -0.29
PHF1-210ENST00000488767 CACUL1Q86Y37 369 aa13.21□□□□□ -0.29
PHF1-210ENST00000488767 ZNF564Q8TBZ8 553 aaPredicted RBP13.21□□□□□ -0.29
PHF1-210ENST00000488767 OR8D1Q8WZ84 308 aa13.21□□□□□ -0.29
PHF1-210ENST00000488767 FOXJ1Q92949 421 aa13.21□□□□□ -0.29
PHF1-210ENST00000488767 MRGPRX3Q96LB0 322 aa13.21□□□□□ -0.29
PHF1-210ENST00000488767 MKRN2Q9H000 416 aaKnown RBP13.21□□□□□ -0.29
PHF1-210ENST00000488767 RAB6CQ9H0N0 254 aa13.21□□□□□ -0.29
PHF1-210ENST00000488767 MAGEH1Q9H213 219 aa13.21□□□□□ -0.29
PHF1-210ENST00000488767 ZWILCHQ9H900 591 aa13.21□□□□□ -0.29
PHF1-210ENST00000488767 CD248Q9HCU0 757 aa13.21□□□□□ -0.29
PHF1-210ENST00000488767 ITM2CQ9NQX7 267 aa13.21□□□□□ -0.29
PHF1-210ENST00000488767 DNAI1Q9UI46 699 aa13.21□□□□□ -0.29
PHF1-210ENST00000488767 SLCO3A1Q9UIG8 710 aa13.21□□□□□ -0.29
PHF1-210ENST00000488767 IGHV1OR15-9A0A0B4J2B8 117 aa13.2□□□□□ -0.3
PHF1-210ENST00000488767 ZSCAN5CA6NGD5 496 aaPredicted RBP13.2□□□□□ -0.3
PHF1-210ENST00000488767 TTC34A8MYJ7 566 aa13.2□□□□□ -0.3
PHF1-210ENST00000488767 EEF2KO00418 725 aaKnown RBP13.2□□□□□ -0.3
PHF1-210ENST00000488767 SIN3BO75182 1162 aa13.2□□□□□ -0.3
PHF1-210ENST00000488767 LRCH4O75427 683 aa13.2□□□□□ -0.3
PHF1-210ENST00000488767 ADH1BP00325 375 aa13.2□□□□□ -0.3
PHF1-210ENST00000488767 TMEM253P0C7T8 217 aa13.2□□□□□ -0.3
PHF1-210ENST00000488767 MIPP30301 263 aa13.2□□□□□ -0.3
PHF1-210ENST00000488767 ARL4AP40617 200 aa13.2□□□□□ -0.3
PHF1-210ENST00000488767 NUMBP49757 651 aa13.2□□□□□ -0.3
PHF1-210ENST00000488767 COPAP53621 1224 aa13.2□□□□□ -0.3
PHF1-210ENST00000488767 POLD3Q15054 466 aaPredicted RBP13.2□□□□□ -0.3
PHF1-210ENST00000488767 BOLA3Q53S33 107 aa13.2□□□□□ -0.3
PHF1-210ENST00000488767 PPP6R3Q5H9R7 873 aaPredicted RBP13.2□□□□□ -0.3
PHF1-210ENST00000488767 FAM46CQ5VWP2 391 aa13.2□□□□□ -0.3
PHF1-210ENST00000488767 LYSMD4Q5XG99 296 aa13.2□□□□□ -0.3
PHF1-210ENST00000488767 RABEPKQ7Z6M1 372 aa13.2□□□□□ -0.3
PHF1-210ENST00000488767 RHOT2Q8IXI1 618 aa13.2□□□□□ -0.3
PHF1-210ENST00000488767 NIPA2Q8N8Q9 360 aa13.2□□□□□ -0.3
PHF1-210ENST00000488767 RTL3Q8N8U3 475 aaKnown RBP13.2□□□□□ -0.3
PHF1-210ENST00000488767 C12orf50Q8NA57 414 aaPredicted RBP13.2□□□□□ -0.3
PHF1-210ENST00000488767 TRIM7Q9C029 511 aa13.2□□□□□ -0.3
PHF1-210ENST00000488767 SLC6A17Q9H1V8 727 aa13.2□□□□□ -0.3
PHF1-210ENST00000488767 RSPH9Q9H1X1 276 aaPredicted RBP13.2□□□□□ -0.3
PHF1-210ENST00000488767 USP36Q9P275 1121 aaKnown RBP13.2□□□□□ -0.3
PHF1-210ENST00000488767 VPS51Q9UID3 782 aa13.2□□□□□ -0.3
PHF1-210ENST00000488767 HS3ST2Q9Y278 367 aa13.2□□□□□ -0.3
PHF1-210ENST00000488767 OR51B4Q9Y5P0 310 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms