RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 NR4A3Q92570 626 aa4.64□□□□□ -1.67
SMC4-219ENST00000487747 CDT1Q9H211 546 aa4.64□□□□□ -1.67
SMC4-219ENST00000487747 FNIP2Q9P278 1114 aa4.64□□□□□ -1.67
SMC4-219ENST00000487747 TBC1D3DA0A087WVF3 549 aa4.63□□□□□ -1.67
SMC4-219ENST00000487747 TBC1D3IA0A087WXS9 549 aa4.63□□□□□ -1.67
SMC4-219ENST00000487747 TBC1D3EA0A087X179 549 aa4.63□□□□□ -1.67
SMC4-219ENST00000487747 TBC1D3KA0A087X1G2 549 aa4.63□□□□□ -1.67
SMC4-219ENST00000487747 TBC1D3BA6NDS4 549 aa4.63□□□□□ -1.67
SMC4-219ENST00000487747 TBC1D3FA6NER0 549 aaPredicted RBP4.63□□□□□ -1.67
SMC4-219ENST00000487747 TBC1D3LB9A6J9 549 aa4.63□□□□□ -1.67
SMC4-219ENST00000487747 RASA4BC9J798 803 aa4.63□□□□□ -1.67
SMC4-219ENST00000487747 STMND1H3BQB6 276 aa4.63□□□□□ -1.67
SMC4-219ENST00000487747 RASA4O43374 803 aa4.63□□□□□ -1.67
SMC4-219ENST00000487747 DNPH1O43598 174 aa4.63□□□□□ -1.67
SMC4-219ENST00000487747 LIASO43766 372 aa4.63□□□□□ -1.67
SMC4-219ENST00000487747 TBC1D3HP0C7X1 549 aa4.63□□□□□ -1.67
SMC4-219ENST00000487747 NPPBP16860 134 aa4.63□□□□□ -1.67
SMC4-219ENST00000487747 ZNF12P17014 697 aa4.63□□□□□ -1.67
SMC4-219ENST00000487747 TM4SF4P48230 202 aa4.63□□□□□ -1.67
SMC4-219ENST00000487747 ERVFC1-1P60608 527 aa4.63□□□□□ -1.67
SMC4-219ENST00000487747 ZP1P60852 638 aa4.63□□□□□ -1.67
SMC4-219ENST00000487747 RBM6P78332 1123 aaKnown RBP4.63□□□□□ -1.67
SMC4-219ENST00000487747 LONRF1Q17RB8 773 aa4.63□□□□□ -1.67
SMC4-219ENST00000487747 FAM76BQ5HYJ3 339 aa4.63□□□□□ -1.67
SMC4-219ENST00000487747 DNTTIP2Q5QJE6 756 aaKnown RBP4.63□□□□□ -1.67
SMC4-219ENST00000487747 GFI1BQ5VTD9 330 aa4.63□□□□□ -1.67
SMC4-219ENST00000487747 OTUD1Q5VV17 481 aaPredicted RBP4.63□□□□□ -1.67
SMC4-219ENST00000487747 C9orf57Q5W0N0 161 aa4.63□□□□□ -1.67
SMC4-219ENST00000487747 ARL6IP4Q66PJ3 421 aaKnown RBP4.63□□□□□ -1.67
SMC4-219ENST00000487747 TBC1D3GQ6DHY5 549 aa4.63□□□□□ -1.67
SMC4-219ENST00000487747 TBC1D3CQ6IPX1 549 aa4.63□□□□□ -1.67
SMC4-219ENST00000487747 ERAP2Q6P179 960 aa4.63□□□□□ -1.67
SMC4-219ENST00000487747 AAGABQ6PD74 315 aa4.63□□□□□ -1.67
SMC4-219ENST00000487747 SLC30A9Q6PML9 568 aa4.63□□□□□ -1.67
SMC4-219ENST00000487747 DPP9Q86TI2 863 aa4.63□□□□□ -1.67
SMC4-219ENST00000487747 TBC1D3Q8IZP1 549 aaPredicted RBP4.63□□□□□ -1.67
SMC4-219ENST00000487747 OR2C3Q8N628 320 aa4.63□□□□□ -1.67
SMC4-219ENST00000487747 NEXN-AS1Q8NBZ9 246 aa4.63□□□□□ -1.67
SMC4-219ENST00000487747 KIAA1191Q96A73 305 aa4.63□□□□□ -1.67
SMC4-219ENST00000487747 RNF146Q9NTX7 359 aa4.63□□□□□ -1.67
SMC4-219ENST00000487747 ARL15Q9NXU5 204 aa4.63□□□□□ -1.67
SMC4-219ENST00000487747 LZTS1Q9Y250 596 aa4.63□□□□□ -1.67
SMC4-219ENST00000487747 SLC38A8A6NNN8 435 aa4.62□□□□□ -1.67
SMC4-219ENST00000487747 SMTNL1A8MU46 457 aa4.62□□□□□ -1.67
SMC4-219ENST00000487747 KIF3BO15066 747 aa4.62□□□□□ -1.67
SMC4-219ENST00000487747 PLA2G6O60733 806 aa4.62□□□□□ -1.67
SMC4-219ENST00000487747 GLUD1P00367 558 aa4.62□□□□□ -1.67
SMC4-219ENST00000487747 PLGP00747 810 aaPredicted RBP4.62□□□□□ -1.67
SMC4-219ENST00000487747 TRIM27P14373 513 aa4.62□□□□□ -1.67
SMC4-219ENST00000487747 GLUD2P49448 558 aa4.62□□□□□ -1.67
SMC4-219ENST00000487747 ALDH18A1P54886 795 aaKnown RBP4.62□□□□□ -1.67
SMC4-219ENST00000487747 RNASELQ05823 741 aaKnown RBP4.62□□□□□ -1.67
SMC4-219ENST00000487747 TRAF3Q13114 568 aa4.62□□□□□ -1.67
SMC4-219ENST00000487747 PKP1Q13835 747 aa4.62□□□□□ -1.67
SMC4-219ENST00000487747 IZUMO3Q5VZ72 239 aa4.62□□□□□ -1.67
SMC4-219ENST00000487747 TMEM200AQ86VY9 491 aa4.62□□□□□ -1.67
SMC4-219ENST00000487747 CLIP4Q8N3C7 705 aa4.62□□□□□ -1.67
SMC4-219ENST00000487747 PJA1Q8NG27 643 aa4.62□□□□□ -1.67
SMC4-219ENST00000487747 WDR60Q8WVS4 1066 aa4.62□□□□□ -1.67
SMC4-219ENST00000487747 CATSPERBQ9H7T0 1116 aa4.62□□□□□ -1.67
SMC4-219ENST00000487747 TM7SF3Q9NS93 570 aa4.62□□□□□ -1.67
SMC4-219ENST00000487747 SLC39A10Q9ULF5 831 aa4.62□□□□□ -1.67
SMC4-219ENST00000487747 ICAM5Q9UMF0 924 aa4.62□□□□□ -1.67
SMC4-219ENST00000487747 PKP3Q9Y446 797 aa4.62□□□□□ -1.67
SMC4-219ENST00000487747 CEP83Q9Y592 693 aa4.62□□□□□ -1.67
SMC4-219ENST00000487747 AGAP5A6NIR3 686 aa4.61□□□□□ -1.67
SMC4-219ENST00000487747 BTBD18B2RXH4 712 aa4.61□□□□□ -1.67
SMC4-219ENST00000487747 HNRNPDLO14979 420 aaKnown RBP4.61□□□□□ -1.67
SMC4-219ENST00000487747 PPP3CCP48454 512 aa4.61□□□□□ -1.67
SMC4-219ENST00000487747 EEF1A2Q05639 463 aaKnown RBP4.61□□□□□ -1.67
SMC4-219ENST00000487747 SF3A3Q12874 501 aaKnown RBP eCLIP4.61□□□□□ -1.674e-10■■■■■ 210.9
SMC4-219ENST00000487747 COASYQ13057 564 aa4.61□□□□□ -1.67
SMC4-219ENST00000487747 BTBD16Q32M84 506 aa4.61□□□□□ -1.67
SMC4-219ENST00000487747 FSCBQ5H9T9 825 aa4.61□□□□□ -1.67
SMC4-219ENST00000487747 CAMK1DQ8IU85 385 aa4.61□□□□□ -1.67
SMC4-219ENST00000487747 OR1N1Q8NGS0 311 aa4.61□□□□□ -1.67
SMC4-219ENST00000487747 HDHD5Q9BXW7 423 aa4.61□□□□□ -1.67
SMC4-219ENST00000487747 CERS4Q9HA82 394 aa4.61□□□□□ -1.67
SMC4-219ENST00000487747 SRRM3A6NNA2 597 aaPredicted RBP4.6□□□□□ -1.67
SMC4-219ENST00000487747 ERVV-2B6SEH9 535 aa4.6□□□□□ -1.67
SMC4-219ENST00000487747 LDB2O43679 373 aa4.6□□□□□ -1.67
SMC4-219ENST00000487747 ASNA1O43681 348 aa4.6□□□□□ -1.67
SMC4-219ENST00000487747 PRSS2P07478 247 aa4.6□□□□□ -1.67
SMC4-219ENST00000487747 THPOP40225 353 aa4.6□□□□□ -1.67
SMC4-219ENST00000487747 STAT1P42224 750 aa4.6□□□□□ -1.67
SMC4-219ENST00000487747 GRSF1Q12849 480 aaKnown RBP eCLIP4.6□□□□□ -1.672e-14■■■■■ 48.8
SMC4-219ENST00000487747 ZNF284Q2VY69 593 aa4.6□□□□□ -1.67
SMC4-219ENST00000487747 KRTAP24-1Q3LI83 254 aa4.6□□□□□ -1.67
SMC4-219ENST00000487747 ZNF569Q5MCW4 686 aa4.6□□□□□ -1.67
SMC4-219ENST00000487747 ANKS1BQ7Z6G8 1248 aa4.6□□□□□ -1.67
SMC4-219ENST00000487747 ANKRD13AQ8IZ07 590 aa4.6□□□□□ -1.67
SMC4-219ENST00000487747 HORMAD2Q8N7B1 307 aa4.6□□□□□ -1.67
SMC4-219ENST00000487747 PRPF18Q99633 342 aaKnown RBP4.6□□□□□ -1.67
SMC4-219ENST00000487747 STK33Q9BYT3 514 aa4.6□□□□□ -1.67
SMC4-219ENST00000487747 HIPK3Q9H422 1215 aa4.6□□□□□ -1.67
SMC4-219ENST00000487747 KLHL31Q9H511 634 aa4.6□□□□□ -1.67
SMC4-219ENST00000487747 PCDHA10Q9Y5I2 948 aa4.6□□□□□ -1.67
SMC4-219ENST00000487747 FAM90A18PA6NE21 464 aa4.59□□□□□ -1.67
SMC4-219ENST00000487747 FAM90A16PA6NEW6 464 aa4.59□□□□□ -1.67
SMC4-219ENST00000487747 AQP12BA6NM10 295 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms