RNA–Protein interactions for RNA: ENST00000487354.1

MCF2L-228, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-228ENST00000487354 RP1P56715 2156 aa15.84■□□□□ 0.13
MCF2L-228ENST00000487354 PTPN13Q12923 2485 aa15.84■□□□□ 0.13
MCF2L-228ENST00000487354 M0QYV0 167 aa15.83■□□□□ 0.12
MCF2L-228ENST00000487354 LZTS3O60299 673 aaPredicted RBP15.83■□□□□ 0.12
MCF2L-228ENST00000487354 OPA1O60313 960 aa15.83■□□□□ 0.12
MCF2L-228ENST00000487354 PAEPP09466 180 aa15.83■□□□□ 0.12
MCF2L-228ENST00000487354 CKMT1AP12532 417 aa15.83■□□□□ 0.12
MCF2L-228ENST00000487354 MYF5P13349 255 aa15.83■□□□□ 0.12
MCF2L-228ENST00000487354 TACR2P21452 398 aa15.83■□□□□ 0.12
MCF2L-228ENST00000487354 BRD2P25440 801 aaKnown RBP15.83■□□□□ 0.12
MCF2L-228ENST00000487354 TMPRSS3P57727 454 aa15.83■□□□□ 0.12
MCF2L-228ENST00000487354 GABREP78334 506 aa15.83■□□□□ 0.12
MCF2L-228ENST00000487354 PITX1P78337 314 aaPredicted RBP15.83■□□□□ 0.12
MCF2L-228ENST00000487354 E2F1Q01094 437 aa15.83■□□□□ 0.12
MCF2L-228ENST00000487354 RHDQ02161 417 aa15.83■□□□□ 0.12
MCF2L-228ENST00000487354 EIF4EBP2Q13542 120 aaPredicted RBP15.83■□□□□ 0.12
MCF2L-228ENST00000487354 LY6DQ14210 128 aa15.83■□□□□ 0.12
MCF2L-228ENST00000487354 ARHGAP40Q5TG30 622 aa15.83■□□□□ 0.12
MCF2L-228ENST00000487354 CXorf57Q6NSI4 855 aaKnown RBP15.83■□□□□ 0.12
MCF2L-228ENST00000487354 PRPF39Q86UA1 669 aaKnown RBP15.83■□□□□ 0.12
MCF2L-228ENST00000487354 OR52K2Q8NGK3 314 aa15.83■□□□□ 0.12
MCF2L-228ENST00000487354 SLC35C1Q96A29 364 aa15.83■□□□□ 0.12
MCF2L-228ENST00000487354 ALG14Q96F25 216 aa15.83■□□□□ 0.12
MCF2L-228ENST00000487354 DDX50Q9BQ39 737 aaKnown RBP15.83■□□□□ 0.12
MCF2L-228ENST00000487354 KIAA1257Q9ULG3 409 aa15.83■□□□□ 0.12
MCF2L-228ENST00000487354 PPM1HQ9ULR3 514 aa15.83■□□□□ 0.12
MCF2L-228ENST00000487354 TRPM6Q9BX84 2022 aa15.83■□□□□ 0.12
MCF2L-228ENST00000487354 SPTA1P02549 2419 aa15.82■□□□□ 0.12
MCF2L-228ENST00000487354 TYW5A2RUC4 315 aaKnown RBP15.82■□□□□ 0.12
MCF2L-228ENST00000487354 RNF103O00237 685 aa15.82■□□□□ 0.12
MCF2L-228ENST00000487354 STX10O60499 249 aa15.82■□□□□ 0.12
MCF2L-228ENST00000487354 FBXO21O94952 628 aa15.82■□□□□ 0.12
MCF2L-228ENST00000487354 MOCS3O95396 460 aa15.82■□□□□ 0.12
MCF2L-228ENST00000487354 EPB41P11171 864 aaKnown RBP15.82■□□□□ 0.12
MCF2L-228ENST00000487354 PDGFRAP16234 1089 aa15.82■□□□□ 0.12
MCF2L-228ENST00000487354 NUDT1P36639 197 aa15.82■□□□□ 0.12
MCF2L-228ENST00000487354 VASPP50552 380 aaPredicted RBP15.82■□□□□ 0.12
MCF2L-228ENST00000487354 IRAK1P51617 712 aa15.82■□□□□ 0.12
MCF2L-228ENST00000487354 PLK1P53350 603 aa15.82■□□□□ 0.12
MCF2L-228ENST00000487354 SKOR1P84550 965 aa15.82■□□□□ 0.12
MCF2L-228ENST00000487354 LRMPQ12912 555 aa15.82■□□□□ 0.12
MCF2L-228ENST00000487354 CNGA2Q16280 664 aa15.82■□□□□ 0.12
MCF2L-228ENST00000487354 POM121L1PQ3SYA9 428 aa15.82■□□□□ 0.12
MCF2L-228ENST00000487354 TAF1BQ53T94 588 aaPredicted RBP15.82■□□□□ 0.12
MCF2L-228ENST00000487354 DCAF17Q5H9S7 520 aaPredicted RBP15.82■□□□□ 0.12
MCF2L-228ENST00000487354 PIP5KL1Q5T9C9 394 aa15.82■□□□□ 0.12
MCF2L-228ENST00000487354 TMEM270Q6UE05 265 aa15.82■□□□□ 0.12
MCF2L-228ENST00000487354 SLC22A18ASQ8N1D0 253 aa15.82■□□□□ 0.12
MCF2L-228ENST00000487354 HSFY1Q96LI6 401 aa15.82■□□□□ 0.12
MCF2L-228ENST00000487354 MIS12Q9H081 205 aa15.82■□□□□ 0.12
MCF2L-228ENST00000487354 CFAP45Q9UL16 551 aa15.82■□□□□ 0.12
MCF2L-228ENST00000487354 CEP83Q9Y592 693 aa15.82■□□□□ 0.12
MCF2L-228ENST00000487354 CAPN8A6NHC0 703 aa15.81■□□□□ 0.12
MCF2L-228ENST00000487354 PRAMEF26H0Y7S4 382 aa15.81■□□□□ 0.12
MCF2L-228ENST00000487354 FFAR2O15552 330 aa15.81■□□□□ 0.12
MCF2L-228ENST00000487354 ATP9BO43861 1147 aa15.81■□□□□ 0.12
MCF2L-228ENST00000487354 USP12O75317 370 aa15.81■□□□□ 0.12
MCF2L-228ENST00000487354 CSO75390 466 aaKnown RBP15.81■□□□□ 0.12
MCF2L-228ENST00000487354 PIAS2O75928 621 aa15.81■□□□□ 0.12
MCF2L-228ENST00000487354 UBR5O95071 2799 aaPredicted RBP15.81■□□□□ 0.12
MCF2L-228ENST00000487354 CTSLP07711 333 aa15.81■□□□□ 0.12
MCF2L-228ENST00000487354 PRLRP16471 622 aa15.81■□□□□ 0.12
MCF2L-228ENST00000487354 SYKP43405 635 aa15.81■□□□□ 0.12
MCF2L-228ENST00000487354 LSSP48449 732 aa15.81■□□□□ 0.12
MCF2L-228ENST00000487354 PMS1P54277 932 aaKnown RBP15.81■□□□□ 0.12
MCF2L-228ENST00000487354 YWHAEP62258 255 aaKnown RBP15.81■□□□□ 0.12
MCF2L-228ENST00000487354 KCNMA1Q12791 1236 aa15.81■□□□□ 0.12
MCF2L-228ENST00000487354 STAT4Q14765 748 aa15.81■□□□□ 0.12
MCF2L-228ENST00000487354 SETMARQ53H47 684 aaPredicted RBP15.81■□□□□ 0.12
MCF2L-228ENST00000487354 ZC3H12AQ5D1E8 599 aaKnown RBP15.81■□□□□ 0.12
MCF2L-228ENST00000487354 RNF219Q5W0B1 726 aaPredicted RBP15.81■□□□□ 0.12
MCF2L-228ENST00000487354 TMC6Q7Z403 805 aa15.81■□□□□ 0.12
MCF2L-228ENST00000487354 CHSY1Q86X52 802 aa15.81■□□□□ 0.12
MCF2L-228ENST00000487354 CCAR2Q8N163 923 aaKnown RBP15.81■□□□□ 0.12
MCF2L-228ENST00000487354 NOX5Q96PH1 765 aa15.81■□□□□ 0.12
MCF2L-228ENST00000487354 MYOCQ99972 504 aa15.81■□□□□ 0.12
MCF2L-228ENST00000487354 GOLPH3LQ9H4A5 285 aa15.81■□□□□ 0.12
MCF2L-228ENST00000487354 FZD3Q9NPG1 666 aa15.81■□□□□ 0.12
MCF2L-228ENST00000487354 GPR27Q9NS67 375 aa15.81■□□□□ 0.12
MCF2L-228ENST00000487354 KLHL11Q9NVR0 708 aa15.81■□□□□ 0.12
MCF2L-228ENST00000487354 PMS2P1A4D2B8 440 aa15.8■□□□□ 0.12
MCF2L-228ENST00000487354 CETN3O15182 167 aa15.8■□□□□ 0.12
MCF2L-228ENST00000487354 SLC16A3O15427 465 aaKnown RBP15.8■□□□□ 0.12
MCF2L-228ENST00000487354 MAGEC1O60732 1142 aa15.8■□□□□ 0.12
MCF2L-228ENST00000487354 THEGLP0DJG4 465 aa15.8■□□□□ 0.12
MCF2L-228ENST00000487354 KRT10P13645 584 aa15.8■□□□□ 0.12
MCF2L-228ENST00000487354 TBXAS1P24557 533 aaPredicted RBP15.8■□□□□ 0.12
MCF2L-228ENST00000487354 UCNP55089 124 aa15.8■□□□□ 0.12
MCF2L-228ENST00000487354 ERVPABLB-1P60509 514 aa15.8■□□□□ 0.12
MCF2L-228ENST00000487354 DAB2P98082 770 aa15.8■□□□□ 0.12
MCF2L-228ENST00000487354 ZNF284Q2VY69 593 aa15.8■□□□□ 0.12
MCF2L-228ENST00000487354 TCERG1LQ5VWI1 586 aa15.8■□□□□ 0.12
MCF2L-228ENST00000487354 KRBA2Q6ZNG9 492 aa15.8■□□□□ 0.12
MCF2L-228ENST00000487354 GCNT7Q6ZNI0 430 aa15.8■□□□□ 0.12
MCF2L-228ENST00000487354 Q6ZVU0 165 aa15.8■□□□□ 0.12
MCF2L-228ENST00000487354 BEND5Q7L4P6 421 aa15.8■□□□□ 0.12
MCF2L-228ENST00000487354 FAM181AQ8N9Y4 354 aa15.8■□□□□ 0.12
MCF2L-228ENST00000487354 OR13H1Q8NG92 308 aa15.8■□□□□ 0.12
MCF2L-228ENST00000487354 LMO3Q8TAP4 145 aa15.8■□□□□ 0.12
MCF2L-228ENST00000487354 KCNE4Q8WWG9 221 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms