RNA–Protein interactions for RNA: ENST00000487062.1

SF3A3-206, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-206ENST00000487062 RIBC1Q8N443 379 aaPredicted RBP7.22□□□□□ -1.25
SF3A3-206ENST00000487062 KREMEN2Q8NCW0 462 aa7.22□□□□□ -1.25
SF3A3-206ENST00000487062 UHMK1Q8TAS1 419 aaKnown RBP7.22□□□□□ -1.25
SF3A3-206ENST00000487062 MICAL1Q8TDZ2 1067 aa7.22□□□□□ -1.25
SF3A3-206ENST00000487062 NSMCE1Q8WV22 266 aa7.22□□□□□ -1.25
SF3A3-206ENST00000487062 POF1BQ8WVV4 589 aa7.22□□□□□ -1.25
SF3A3-206ENST00000487062 MRPS31Q92665 395 aaKnown RBP7.22□□□□□ -1.25
SF3A3-206ENST00000487062 DPF3Q92784 378 aa7.22□□□□□ -1.25
SF3A3-206ENST00000487062 ARL8AQ96BM9 186 aa7.22□□□□□ -1.25
SF3A3-206ENST00000487062 ZBTB9Q96C00 473 aa7.22□□□□□ -1.25
SF3A3-206ENST00000487062 PGM2Q96G03 612 aa7.22□□□□□ -1.25
SF3A3-206ENST00000487062 CELF6Q96J87 481 aaKnown RBP7.22□□□□□ -1.25
SF3A3-206ENST00000487062 PWWP2AQ96N64 755 aa7.22□□□□□ -1.25
SF3A3-206ENST00000487062 RPRD1AQ96P16 312 aaPredicted RBP7.22□□□□□ -1.25
SF3A3-206ENST00000487062 SERPINB12Q96P63 405 aa7.22□□□□□ -1.25
SF3A3-206ENST00000487062 PRMT1Q99873 361 aaKnown RBP7.22□□□□□ -1.25
SF3A3-206ENST00000487062 TCF25Q9BQ70 676 aa7.22□□□□□ -1.25
SF3A3-206ENST00000487062 SLC39A8Q9C0K1 460 aa7.22□□□□□ -1.25
SF3A3-206ENST00000487062 VPS37BQ9H9H4 285 aa7.22□□□□□ -1.25
SF3A3-206ENST00000487062 EIF2B3Q9NR50 452 aaKnown RBP7.22□□□□□ -1.25
SF3A3-206ENST00000487062 TLR9Q9NR96 1032 aa7.22□□□□□ -1.25
SF3A3-206ENST00000487062 DPP7Q9UHL4 492 aa7.22□□□□□ -1.25
SF3A3-206ENST00000487062 RSPH14Q9UHP6 348 aa7.22□□□□□ -1.25
SF3A3-206ENST00000487062 NEU3Q9UQ49 428 aa7.22□□□□□ -1.25
SF3A3-206ENST00000487062 HELZP42694 1942 aaKnown RBP7.21□□□□□ -1.25
SF3A3-206ENST00000487062 EXOC1LA0A1B0GW35 172 aa7.21□□□□□ -1.26
SF3A3-206ENST00000487062 TCRBV7S3A2A0A539 114 aa7.21□□□□□ -1.26
SF3A3-206ENST00000487062 TYW5A2RUC4 315 aaKnown RBP7.21□□□□□ -1.26
SF3A3-206ENST00000487062 LCHNA4D1U4 455 aa7.21□□□□□ -1.26
SF3A3-206ENST00000487062 LINC01553A4QN01 128 aa7.21□□□□□ -1.26
SF3A3-206ENST00000487062 C5orf67F2Z3F1 127 aa7.21□□□□□ -1.26
SF3A3-206ENST00000487062 KCNK1O00180 336 aa7.21□□□□□ -1.26
SF3A3-206ENST00000487062 AP3B1O00203 1094 aa7.21□□□□□ -1.26
SF3A3-206ENST00000487062 TCEA3O75764 348 aa7.21□□□□□ -1.26
SF3A3-206ENST00000487062 STC2O76061 302 aa7.21□□□□□ -1.26
SF3A3-206ENST00000487062 CPP00450 1065 aa7.21□□□□□ -1.26
SF3A3-206ENST00000487062 OAS1P00973 400 aaKnown RBP7.21□□□□□ -1.26
SF3A3-206ENST00000487062 AGTP01019 485 aa7.21□□□□□ -1.26
SF3A3-206ENST00000487062 JCHAINP01591 159 aa7.21□□□□□ -1.26
SF3A3-206ENST00000487062 F11P03951 625 aa7.21□□□□□ -1.26
SF3A3-206ENST00000487062 SHBGP04278 402 aa7.21□□□□□ -1.26
SF3A3-206ENST00000487062 C8AP07357 584 aa7.21□□□□□ -1.26
SF3A3-206ENST00000487062 GSTA2P09210 222 aa7.21□□□□□ -1.26
SF3A3-206ENST00000487062 SPATA31D3P0C874 917 aa7.21□□□□□ -1.26
SF3A3-206ENST00000487062 CCNB1P14635 433 aa7.21□□□□□ -1.26
SF3A3-206ENST00000487062 PFKLP17858 780 aa7.21□□□□□ -1.26
SF3A3-206ENST00000487062 PSMB4P28070 264 aa7.21□□□□□ -1.26
SF3A3-206ENST00000487062 GABRR2P28476 465 aa7.21□□□□□ -1.26
SF3A3-206ENST00000487062 CDC25CP30307 473 aa7.21□□□□□ -1.26
SF3A3-206ENST00000487062 PAPOLAP51003 745 aaKnown RBP7.21□□□□□ -1.26
SF3A3-206ENST00000487062 KCNQ1P51787 676 aa7.21□□□□□ -1.26
SF3A3-206ENST00000487062 CDH4P55283 916 aa7.21□□□□□ -1.26
SF3A3-206ENST00000487062 IFI35P80217 286 aaPredicted RBP7.21□□□□□ -1.26
SF3A3-206ENST00000487062 KLHL38Q2WGJ6 581 aa7.21□□□□□ -1.26
SF3A3-206ENST00000487062 PARP15Q460N3 678 aa7.21□□□□□ -1.26
SF3A3-206ENST00000487062 C5orf22Q49AR2 442 aa7.21□□□□□ -1.26
SF3A3-206ENST00000487062 TTMPQ5BVD1 217 aa7.21□□□□□ -1.26
SF3A3-206ENST00000487062 PPM1LQ5SGD2 360 aa7.21□□□□□ -1.26
SF3A3-206ENST00000487062 FNBP1LQ5T0N5 605 aa7.21□□□□□ -1.26
SF3A3-206ENST00000487062 TTC39BQ5VTQ0 682 aaPredicted RBP7.21□□□□□ -1.26
SF3A3-206ENST00000487062 PLPP4Q5VZY2 271 aa7.21□□□□□ -1.26
SF3A3-206ENST00000487062 AFMIDQ63HM1 303 aa7.21□□□□□ -1.26
SF3A3-206ENST00000487062 KCTD16Q68DU8 428 aa7.21□□□□□ -1.26
SF3A3-206ENST00000487062 FBXL22Q6P050 247 aa7.21□□□□□ -1.26
SF3A3-206ENST00000487062 SPATA31D4Q6ZUB0 917 aa7.21□□□□□ -1.26
SF3A3-206ENST00000487062 TAOK1Q7L7X3 1001 aa7.21□□□□□ -1.26
SF3A3-206ENST00000487062 NLRP14Q86W24 1093 aa7.21□□□□□ -1.26
SF3A3-206ENST00000487062 ZNF354CQ86Y25 554 aa7.21□□□□□ -1.26
SF3A3-206ENST00000487062 ANKMY2Q8IV38 441 aa7.21□□□□□ -1.26
SF3A3-206ENST00000487062 ARHGAP12Q8IWW6 846 aa7.21□□□□□ -1.26
SF3A3-206ENST00000487062 TP53INP2Q8IXH6 220 aa7.21□□□□□ -1.26
SF3A3-206ENST00000487062 ZNF683Q8IZ20 524 aa7.21□□□□□ -1.26
SF3A3-206ENST00000487062 LGI2Q8N0V4 545 aa7.21□□□□□ -1.26
SF3A3-206ENST00000487062 MRPL43Q8N983 215 aaKnown RBP7.21□□□□□ -1.26
SF3A3-206ENST00000487062 NETO2Q8NC67 525 aa7.21□□□□□ -1.26
SF3A3-206ENST00000487062 FBXO36Q8NEA4 188 aa7.21□□□□□ -1.26
SF3A3-206ENST00000487062 SPPL3Q8TCT6 385 aa7.21□□□□□ -1.26
SF3A3-206ENST00000487062 DEPDC1BQ8WUY9 529 aa7.21□□□□□ -1.26
SF3A3-206ENST00000487062 FATE1Q969F0 183 aa7.21□□□□□ -1.26
SF3A3-206ENST00000487062 TEKT5Q96M29 485 aa7.21□□□□□ -1.26
SF3A3-206ENST00000487062 KLF16Q9BXK1 252 aaPredicted RBP7.21□□□□□ -1.26
SF3A3-206ENST00000487062 GBA3Q9H227 469 aa7.21□□□□□ -1.26
SF3A3-206ENST00000487062 TRPC7Q9HCX4 862 aa7.21□□□□□ -1.26
SF3A3-206ENST00000487062 ALG13Q9NP73 1137 aaKnown RBP7.21□□□□□ -1.26
SF3A3-206ENST00000487062 HAUS2Q9NVX0 235 aa7.21□□□□□ -1.26
SF3A3-206ENST00000487062 MPP6Q9NZW5 540 aa7.21□□□□□ -1.26
SF3A3-206ENST00000487062 KIAA1522Q9P206 1035 aaPredicted RBP7.21□□□□□ -1.26
SF3A3-206ENST00000487062 LSM7Q9UK45 103 aaKnown RBP7.21□□□□□ -1.26
SF3A3-206ENST00000487062 ADAM21Q9UKJ8 722 aa7.21□□□□□ -1.26
SF3A3-206ENST00000487062 NR2E3Q9Y5X4 410 aa7.21□□□□□ -1.26
SF3A3-206ENST00000487062 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.21□□□□□ -1.26
SF3A3-206ENST00000487062 CEP350Q5VT06 3117 aa7.21□□□□□ -1.26
SF3A3-206ENST00000487062 MIA3Q5JRA6 1907 aa7.21□□□□□ -1.26
SF3A3-206ENST00000487062 TRAV19A0A0A6YYK7 116 aa7.2□□□□□ -1.26
SF3A3-206ENST00000487062 C2orf78A6NCI8 922 aa7.2□□□□□ -1.26
SF3A3-206ENST00000487062 C2orf71A6NGG8 1288 aa7.2□□□□□ -1.26
SF3A3-206ENST00000487062 SMIM23A6NLE4 172 aa7.2□□□□□ -1.26
SF3A3-206ENST00000487062 RASA4BC9J798 803 aa7.2□□□□□ -1.26
SF3A3-206ENST00000487062 ZBTB24O43167 697 aaPredicted RBP7.2□□□□□ -1.26
SF3A3-206ENST00000487062 RASA4O43374 803 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms