RNA–Protein interactions for RNA: ENST00000486995.5

PTCD2-204, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 2

Gene PTCD2, Length 2,648 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-204ENST00000486995 CPA4Q9UI42 421 aa12.59□□□□□ -0.39
PTCD2-204ENST00000486995 TRHDEQ9UKU6 1024 aa12.59□□□□□ -0.39
PTCD2-204ENST00000486995 CORO1CQ9ULV4 474 aaPredicted RBP12.59□□□□□ -0.39
PTCD2-204ENST00000486995 SOX13Q9UN79 622 aa12.59□□□□□ -0.39
PTCD2-204ENST00000486995 CLEC11AQ9Y240 323 aa12.59□□□□□ -0.39
PTCD2-204ENST00000486995 A0A088AWK7 358 aa12.59□□□□□ -0.39
PTCD2-204ENST00000486995 ERI2A8K979 691 aaKnown RBP12.59□□□□□ -0.39
PTCD2-204ENST00000486995 MEI4A8MW99 385 aa12.59□□□□□ -0.39
PTCD2-204ENST00000486995 ATP9BO43861 1147 aa12.59□□□□□ -0.39
PTCD2-204ENST00000486995 NFKB1P19838 968 aa12.59□□□□□ -0.39
PTCD2-204ENST00000486995 ABCG1P45844 678 aa12.59□□□□□ -0.39
PTCD2-204ENST00000486995 DLG2Q15700 870 aa12.59□□□□□ -0.39
PTCD2-204ENST00000486995 ARL13BQ3SXY8 428 aa12.59□□□□□ -0.39
PTCD2-204ENST00000486995 VWA5B1Q5TIE3 1220 aa12.59□□□□□ -0.39
PTCD2-204ENST00000486995 CLEC14AQ86T13 490 aa12.59□□□□□ -0.39
PTCD2-204ENST00000486995 RSPH3Q86UC2 560 aa12.59□□□□□ -0.39
PTCD2-204ENST00000486995 MYLK4Q86YV6 388 aaPredicted RBP12.59□□□□□ -0.39
PTCD2-204ENST00000486995 TMEM86AQ8N2M4 240 aa12.59□□□□□ -0.39
PTCD2-204ENST00000486995 APOL2Q9BQE5 337 aa12.59□□□□□ -0.39
PTCD2-204ENST00000486995 SYT17Q9BSW7 474 aa12.59□□□□□ -0.39
PTCD2-204ENST00000486995 MCMBPQ9BTE3 642 aa12.59□□□□□ -0.39
PTCD2-204ENST00000486995 OSBPL1AQ9BXW6 950 aa12.59□□□□□ -0.39
PTCD2-204ENST00000486995 TKTL2Q9H0I9 626 aa12.59□□□□□ -0.39
PTCD2-204ENST00000486995 WDCPQ9H6R7 721 aa12.59□□□□□ -0.39
PTCD2-204ENST00000486995 CAB39LQ9H9S4 337 aa12.59□□□□□ -0.39
PTCD2-204ENST00000486995 SLC38A7Q9NVC3 462 aa12.59□□□□□ -0.39
PTCD2-204ENST00000486995 OR12D3Q9UGF7 316 aa12.59□□□□□ -0.39
PTCD2-204ENST00000486995 MAGED2Q9UNF1 606 aaPredicted RBP12.59□□□□□ -0.39
PTCD2-204ENST00000486995 A0A096LPK6 155 aa12.58□□□□□ -0.39
PTCD2-204ENST00000486995 G3V2L1 256 aa12.58□□□□□ -0.39
PTCD2-204ENST00000486995 MTSS1O43312 755 aa12.58□□□□□ -0.39
PTCD2-204ENST00000486995 CIB2O75838 187 aa12.58□□□□□ -0.39
PTCD2-204ENST00000486995 TPH1P17752 444 aa12.58□□□□□ -0.39
PTCD2-204ENST00000486995 PAX7P23759 505 aa12.58□□□□□ -0.39
PTCD2-204ENST00000486995 CXCR3P49682 368 aa12.58□□□□□ -0.39
PTCD2-204ENST00000486995 MXRA7P84157 204 aa12.58□□□□□ -0.39
PTCD2-204ENST00000486995 SLC25A3Q00325 362 aa12.58□□□□□ -0.39
PTCD2-204ENST00000486995 IRF9Q00978 393 aa12.58□□□□□ -0.39
PTCD2-204ENST00000486995 NAPRTQ6XQN6 538 aa12.58□□□□□ -0.39
PTCD2-204ENST00000486995 LMNTD2Q8IXW0 634 aa12.58□□□□□ -0.39
PTCD2-204ENST00000486995 ACVR1CQ8NER5 493 aa12.58□□□□□ -0.39
PTCD2-204ENST00000486995 TEKT5Q96M29 485 aa12.58□□□□□ -0.39
PTCD2-204ENST00000486995 OXCT2Q9BYC2 517 aaPredicted RBP12.58□□□□□ -0.39
PTCD2-204ENST00000486995 RHOBTB2Q9BYZ6 727 aa12.58□□□□□ -0.39
PTCD2-204ENST00000486995 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.58□□□□□ -0.4
PTCD2-204ENST00000486995 MAGEB16A2A368 324 aa12.58□□□□□ -0.4
PTCD2-204ENST00000486995 SKAP2O75563 359 aaPredicted RBP12.58□□□□□ -0.4
PTCD2-204ENST00000486995 LRIG2O94898 1065 aa12.58□□□□□ -0.4
PTCD2-204ENST00000486995 F9P00740 461 aa12.58□□□□□ -0.4
PTCD2-204ENST00000486995 THP07101 528 aa12.58□□□□□ -0.4
PTCD2-204ENST00000486995 PDHA1P08559 390 aa12.58□□□□□ -0.4
PTCD2-204ENST00000486995 NPY2RP49146 381 aa12.58□□□□□ -0.4
PTCD2-204ENST00000486995 PM20D1Q6GTS8 502 aa12.58□□□□□ -0.4
PTCD2-204ENST00000486995 POU5F2Q8N7G0 328 aa12.58□□□□□ -0.4
PTCD2-204ENST00000486995 SHKBP1Q8TBC3 707 aa12.58□□□□□ -0.4
PTCD2-204ENST00000486995 LPPQ93052 612 aa12.58□□□□□ -0.4
PTCD2-204ENST00000486995 FAM96AQ9H5X1 160 aa12.58□□□□□ -0.4
PTCD2-204ENST00000486995 FAM105AQ9NUU6 356 aa12.58□□□□□ -0.4
PTCD2-204ENST00000486995 RRN3Q9NYV6 651 aa12.58□□□□□ -0.4
PTCD2-204ENST00000486995 UBP1Q9NZI7 540 aa12.58□□□□□ -0.4
PTCD2-204ENST00000486995 CDH9Q9ULB4 789 aa12.58□□□□□ -0.4
PTCD2-204ENST00000486995 PCDHB12Q9Y5F1 795 aa12.58□□□□□ -0.4
PTCD2-204ENST00000486995 PTCH2Q9Y6C5 1203 aa12.58□□□□□ -0.4
PTCD2-204ENST00000486995 KIF1CO43896 1103 aaKnown RBP12.58□□□□□ -0.4
PTCD2-204ENST00000486995 JCHAINP01591 159 aa12.58□□□□□ -0.4
PTCD2-204ENST00000486995 MPOP05164 745 aa12.58□□□□□ -0.4
PTCD2-204ENST00000486995 C2P06681 752 aa12.58□□□□□ -0.4
PTCD2-204ENST00000486995 GNAT1P11488 350 aa12.58□□□□□ -0.4
PTCD2-204ENST00000486995 MYL4P12829 197 aa12.58□□□□□ -0.4
PTCD2-204ENST00000486995 ERFP50548 548 aa12.58□□□□□ -0.4
PTCD2-204ENST00000486995 PURAQ00577 322 aaKnown RBP12.58□□□□□ -0.4
PTCD2-204ENST00000486995 ITPRIPL1Q6GPH6 555 aa12.58□□□□□ -0.4
PTCD2-204ENST00000486995 KCNMB4Q86W47 210 aa12.58□□□□□ -0.4
PTCD2-204ENST00000486995 URGCPQ8TCY9 931 aa12.58□□□□□ -0.4
PTCD2-204ENST00000486995 VAT1Q99536 393 aa12.58□□□□□ -0.4
PTCD2-204ENST00000486995 EPAS1Q99814 870 aa12.58□□□□□ -0.4
PTCD2-204ENST00000486995 PAAF1Q9BRP4 392 aa12.58□□□□□ -0.4
PTCD2-204ENST00000486995 KATNAL1Q9BW62 490 aa12.58□□□□□ -0.4
PTCD2-204ENST00000486995 AP5M1Q9H0R1 490 aa12.58□□□□□ -0.4
PTCD2-204ENST00000486995 C20orf96Q9NUD7 363 aaPredicted RBP12.58□□□□□ -0.4
PTCD2-204ENST00000486995 ST3GAL5Q9UNP4 418 aa12.58□□□□□ -0.4
PTCD2-204ENST00000486995 DNAH12Q6ZR08 3092 aa12.57□□□□□ -0.4
PTCD2-204ENST00000486995 DOCK3Q8IZD9 2030 aa12.57□□□□□ -0.4
PTCD2-204ENST00000486995 IQCA1LA6NCM1 817 aa12.57□□□□□ -0.4
PTCD2-204ENST00000486995 ARHGAP42A6NI28 874 aa12.57□□□□□ -0.4
PTCD2-204ENST00000486995 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.57□□□□□ -0.4
PTCD2-204ENST00000486995 NMBRP28336 390 aa12.57□□□□□ -0.4
PTCD2-204ENST00000486995 USP4Q13107 963 aa12.57□□□□□ -0.4
PTCD2-204ENST00000486995 MPP3Q13368 585 aa12.57□□□□□ -0.4
PTCD2-204ENST00000486995 C6orf163Q5TEZ5 329 aa12.57□□□□□ -0.4
PTCD2-204ENST00000486995 C1orf146Q5VVC0 180 aa12.57□□□□□ -0.4
PTCD2-204ENST00000486995 PDPK2PQ6A1A2 396 aa12.57□□□□□ -0.4
PTCD2-204ENST00000486995 CAPRIN2Q6IMN6 1127 aaKnown RBP12.57□□□□□ -0.4
PTCD2-204ENST00000486995 KBTBD2Q8IY47 623 aa12.57□□□□□ -0.4
PTCD2-204ENST00000486995 CNTD1Q8N815 330 aa12.57□□□□□ -0.4
PTCD2-204ENST00000486995 ZNF781Q8N8C0 355 aa12.57□□□□□ -0.4
PTCD2-204ENST00000486995 SMARCD1Q96GM5 515 aa12.57□□□□□ -0.4
PTCD2-204ENST00000486995 CELF6Q96J87 481 aaKnown RBP12.57□□□□□ -0.4
PTCD2-204ENST00000486995 RTP3Q9BQQ7 232 aa12.57□□□□□ -0.4
PTCD2-204ENST00000486995 IL22Q9GZX6 179 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms