RNA–Protein interactions for RNA: ENST00000486991.1

NR1H3-223, Transcript of nuclear receptor subfamily 1 group H member 3, human

TSL 4

Gene NR1H3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1H3-223	ENST00000486991	PGAP3	Q96FM1	320 aa	Predicted RBP	13.49	□□□□□ -0.25
NR1H3-223	ENST00000486991	NCAPG	Q9BPX3	1015 aa		13.49	□□□□□ -0.25
NR1H3-223	ENST00000486991	POLM	Q9NP87	494 aa	Predicted RBP	13.49	□□□□□ -0.25
NR1H3-223	ENST00000486991	BCCIP	Q9P287	314 aa	Known RBP eCLIP	13.49	□□□□□ -0.25
NR1H3-223	ENST00000486991	PCSK1N	Q9UHG2	260 aa		13.49	□□□□□ -0.25
NR1H3-223	ENST00000486991	FBXO10	Q9UK96	956 aa		13.49	□□□□□ -0.25
NR1H3-223	ENST00000486991	AGO1	Q9UL18	857 aa	Known RBP	13.49	□□□□□ -0.25
NR1H3-223	ENST00000486991	TLR6	Q9Y2C9	796 aa		13.49	□□□□□ -0.25
NR1H3-223	ENST00000486991	HBS1L	Q9Y450	684 aa	Known RBP	13.49	□□□□□ -0.25
NR1H3-223	ENST00000486991	ADAMTS9	Q9P2N4	1935 aa		13.49	□□□□□ -0.25
NR1H3-223	ENST00000486991	CACNA1E	Q15878	2313 aa		13.48	□□□□□ -0.25
NR1H3-223	ENST00000486991	NYNRIN	Q9P2P1	1898 aa	Known RBP	13.48	□□□□□ -0.25
NR1H3-223	ENST00000486991	NBEA	Q8NFP9	2946 aa		13.48	□□□□□ -0.25
NR1H3-223	ENST00000486991	TCRBV21S2A2	A0A5A6	115 aa		13.48	□□□□□ -0.25
NR1H3-223	ENST00000486991	NEDD8-MDP1	E9PL57	170 aa		13.48	□□□□□ -0.25
NR1H3-223	ENST00000486991	PRPSAP2	O60256	369 aa		13.48	□□□□□ -0.25
NR1H3-223	ENST00000486991	FTCD	O95954	541 aa		13.48	□□□□□ -0.25
NR1H3-223	ENST00000486991	CISD3	P0C7P0	127 aa		13.48	□□□□□ -0.25
NR1H3-223	ENST00000486991	ITPKA	P23677	461 aa		13.48	□□□□□ -0.25
NR1H3-223	ENST00000486991	MSN	P26038	577 aa	Known RBP	13.48	□□□□□ -0.25
NR1H3-223	ENST00000486991	MIP	P30301	263 aa		13.48	□□□□□ -0.25
NR1H3-223	ENST00000486991	SLC1A1	P43005	524 aa		13.48	□□□□□ -0.25
NR1H3-223	ENST00000486991	NNT	Q13423	1086 aa		13.48	□□□□□ -0.25
NR1H3-223	ENST00000486991	HADH	Q16836	314 aa	Known RBP	13.48	□□□□□ -0.25
NR1H3-223	ENST00000486991	MAP7D1	Q3KQU3	841 aa		13.48	□□□□□ -0.25
NR1H3-223	ENST00000486991	ZC3H12A	Q5D1E8	599 aa	Known RBP	13.48	□□□□□ -0.25
NR1H3-223	ENST00000486991	TRIM61	Q5EBN2	209 aa		13.48	□□□□□ -0.25
NR1H3-223	ENST00000486991	GRAMD4	Q6IC98	578 aa		13.48	□□□□□ -0.25
NR1H3-223	ENST00000486991	SDE2	Q6IQ49	451 aa		13.48	□□□□□ -0.25
NR1H3-223	ENST00000486991	UNQ6494/PRO21346	Q6UXR6	183 aa		13.48	□□□□□ -0.25
NR1H3-223	ENST00000486991	TPGS1	Q6ZTW0	290 aa		13.48	□□□□□ -0.25
NR1H3-223	ENST00000486991	LPCAT2	Q7L5N7	544 aa		13.48	□□□□□ -0.25
NR1H3-223	ENST00000486991	PEX26	Q7Z412	305 aa		13.48	□□□□□ -0.25
NR1H3-223	ENST00000486991	BNIPL	Q7Z465	357 aa		13.48	□□□□□ -0.25
NR1H3-223	ENST00000486991	DENND1C	Q8IV53	801 aa		13.48	□□□□□ -0.25
NR1H3-223	ENST00000486991	ARFGAP1	Q8N6T3	406 aa		13.48	□□□□□ -0.25
NR1H3-223	ENST00000486991	LRRC57	Q8N9N7	239 aa		13.48	□□□□□ -0.25
NR1H3-223	ENST00000486991	TRIM58	Q8NG06	486 aa		13.48	□□□□□ -0.25
NR1H3-223	ENST00000486991	PLD4	Q96BZ4	506 aa		13.48	□□□□□ -0.25
NR1H3-223	ENST00000486991	BBS2	Q9BXC9	721 aa		13.48	□□□□□ -0.25
NR1H3-223	ENST00000486991	WDCP	Q9H6R7	721 aa		13.48	□□□□□ -0.25
NR1H3-223	ENST00000486991	ZWILCH	Q9H900	591 aa		13.48	□□□□□ -0.25
NR1H3-223	ENST00000486991	CD248	Q9HCU0	757 aa		13.48	□□□□□ -0.25
NR1H3-223	ENST00000486991	STOML2	Q9UJZ1	356 aa		13.48	□□□□□ -0.25
NR1H3-223	ENST00000486991	ZMIZ1	Q9ULJ6	1067 aa		13.48	□□□□□ -0.25
NR1H3-223	ENST00000486991	NUMA1	Q14980	2115 aa		13.48	□□□□□ -0.25
NR1H3-223	ENST00000486991	IGF2R	P11717	2491 aa		13.47	□□□□□ -0.25
NR1H3-223	ENST00000486991	PRRT4	C9JH25	899 aa		13.47	□□□□□ -0.25
NR1H3-223	ENST00000486991	MOCS2	O96007	188 aa	Predicted RBP	13.47	□□□□□ -0.25
NR1H3-223	ENST00000486991	APOE	P02649	317 aa		13.47	□□□□□ -0.25
NR1H3-223	ENST00000486991	CYBB	P04839	570 aa		13.47	□□□□□ -0.25
NR1H3-223	ENST00000486991	TCF4	P15884	667 aa		13.47	□□□□□ -0.25
NR1H3-223	ENST00000486991	CCR1	P32246	355 aa		13.47	□□□□□ -0.25
NR1H3-223	ENST00000486991	PCK1	P35558	622 aa		13.47	□□□□□ -0.25
NR1H3-223	ENST00000486991	CXCR3	P49682	368 aa		13.47	□□□□□ -0.25
NR1H3-223	ENST00000486991	TAS2R40	P59535	323 aa		13.47	□□□□□ -0.25
NR1H3-223	ENST00000486991	GNG11	P61952	73 aa		13.47	□□□□□ -0.25
NR1H3-223	ENST00000486991	BYSL	Q13895	437 aa	Known RBP	13.47	□□□□□ -0.25
NR1H3-223	ENST00000486991	BRMS1L	Q5PSV4	323 aa		13.47	□□□□□ -0.25
NR1H3-223	ENST00000486991	SLFN11	Q7Z7L1	901 aa		13.47	□□□□□ -0.25
NR1H3-223	ENST00000486991	SLC35F6	Q8N357	371 aa		13.47	□□□□□ -0.25
NR1H3-223	ENST00000486991	CPXM2	Q8N436	756 aa		13.47	□□□□□ -0.25
NR1H3-223	ENST00000486991	OR2I1P	Q8NGU4	316 aa		13.47	□□□□□ -0.25
NR1H3-223	ENST00000486991	BHMT	Q93088	406 aa		13.47	□□□□□ -0.25
NR1H3-223	ENST00000486991	SLC39A13	Q96H72	371 aa		13.47	□□□□□ -0.25
NR1H3-223	ENST00000486991	FCRL2	Q96LA5	508 aa	Predicted RBP	13.47	□□□□□ -0.25
NR1H3-223	ENST00000486991	PEBP4	Q96S96	227 aa		13.47	□□□□□ -0.25
NR1H3-223	ENST00000486991	SCNM1	Q9BWG6	230 aa		13.47	□□□□□ -0.25
NR1H3-223	ENST00000486991	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	13.47	□□□□□ -0.25
NR1H3-223	ENST00000486991	TKTL2	Q9H0I9	626 aa		13.47	□□□□□ -0.25
NR1H3-223	ENST00000486991	DNAJC17	Q9NVM6	304 aa	Known RBP	13.47	□□□□□ -0.25
NR1H3-223	ENST00000486991	TMEM51	Q9NW97	253 aa		13.47	□□□□□ -0.25
NR1H3-223	ENST00000486991	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	13.47	□□□□□ -0.25
NR1H3-223	ENST00000486991	PLK2	Q9NYY3	685 aa		13.47	□□□□□ -0.25
NR1H3-223	ENST00000486991	AMFR	Q9UKV5	643 aa		13.47	□□□□□ -0.25
NR1H3-223	ENST00000486991	CLEC4E	Q9ULY5	219 aa		13.47	□□□□□ -0.25
NR1H3-223	ENST00000486991	DMXL2	Q8TDJ6	3036 aa		13.47	□□□□□ -0.25
NR1H3-223	ENST00000486991	DSP	P15924	2871 aa	Known RBP	13.46	□□□□□ -0.25
NR1H3-223	ENST00000486991	DOCK4	Q8N1I0	1966 aa		13.46	□□□□□ -0.25
NR1H3-223	ENST00000486991	SPAAR	A0A1B0GVQ0	90 aa		13.46	□□□□□ -0.25
NR1H3-223	ENST00000486991	SLC2A3	P11169	496 aa		13.46	□□□□□ -0.25
NR1H3-223	ENST00000486991	ENG	P17813	658 aa		13.46	□□□□□ -0.25
NR1H3-223	ENST00000486991	HARS2	P49590	506 aa	Known RBP	13.46	□□□□□ -0.25
NR1H3-223	ENST00000486991	RING1	Q06587	406 aa		13.46	□□□□□ -0.25
NR1H3-223	ENST00000486991	EIF4EBP2	Q13542	120 aa	Predicted RBP	13.46	□□□□□ -0.25
NR1H3-223	ENST00000486991	ARL13B	Q3SXY8	428 aa		13.46	□□□□□ -0.25
NR1H3-223	ENST00000486991	ZFYVE27	Q5T4F4	411 aa		13.46	□□□□□ -0.25
NR1H3-223	ENST00000486991	EGFLAM	Q63HQ2	1017 aa		13.46	□□□□□ -0.25
NR1H3-223	ENST00000486991	NUGGC	Q68CJ6	796 aa		13.46	□□□□□ -0.25
NR1H3-223	ENST00000486991	NT5DC3	Q86UY8	548 aa		13.46	□□□□□ -0.25
NR1H3-223	ENST00000486991	UNC45B	Q8IWX7	931 aa		13.46	□□□□□ -0.25
NR1H3-223	ENST00000486991	RHOT1	Q8IXI2	618 aa		13.46	□□□□□ -0.25
NR1H3-223	ENST00000486991	CCDC185	Q8N715	623 aa		13.46	□□□□□ -0.25
NR1H3-223	ENST00000486991	ATP6V0D2	Q8N8Y2	350 aa		13.46	□□□□□ -0.25
NR1H3-223	ENST00000486991	ACOX2	Q99424	681 aa		13.46	□□□□□ -0.25
NR1H3-223	ENST00000486991	CD93	Q9NPY3	652 aa		13.46	□□□□□ -0.25
NR1H3-223	ENST00000486991	TMPRSS4	Q9NRS4	437 aa		13.46	□□□□□ -0.25
NR1H3-223	ENST00000486991	GPATCH2L	Q9NWQ4	482 aa		13.46	□□□□□ -0.25
NR1H3-223	ENST00000486991	SLC12A6	Q9UHW9	1150 aa		13.46	□□□□□ -0.25
NR1H3-223	ENST00000486991	PACSIN2	Q9UNF0	486 aa	Predicted RBP	13.46	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms