RNA–Protein interactions for RNA: ENST00000486927.1

ATL2-215, Transcript of atlastin GTPase 2, human

TSL 4

Gene ATL2, Length 553 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATL2-215	ENST00000486927	SART1	O43290	800 aa	Known RBP	13.16	□□□□□ -0.3
ATL2-215	ENST00000486927	ATP9B	O43861	1147 aa		13.16	□□□□□ -0.3
ATL2-215	ENST00000486927	CALCA	P01258	141 aa		13.16	□□□□□ -0.3
ATL2-215	ENST00000486927	DGKA	P23743	735 aa		13.16	□□□□□ -0.3
ATL2-215	ENST00000486927	FMO5	P49326	533 aa		13.16	□□□□□ -0.3
ATL2-215	ENST00000486927	YWHAZ	P63104	245 aa	Known RBP	13.16	□□□□□ -0.3
ATL2-215	ENST00000486927	CFHR1	Q03591	330 aa		13.16	□□□□□ -0.3
ATL2-215	ENST00000486927	FAM46C	Q5VWP2	391 aa		13.16	□□□□□ -0.3
ATL2-215	ENST00000486927	RNF219	Q5W0B1	726 aa	Predicted RBP	13.16	□□□□□ -0.3
ATL2-215	ENST00000486927	RAP1GAP2	Q684P5	730 aa		13.16	□□□□□ -0.3
ATL2-215	ENST00000486927	TAC4	Q86UU9	113 aa		13.16	□□□□□ -0.3
ATL2-215	ENST00000486927	KAT5	Q92993	513 aa		13.16	□□□□□ -0.3
ATL2-215	ENST00000486927	KLHDC7B	Q96G42	594 aa		13.16	□□□□□ -0.3
ATL2-215	ENST00000486927	ZNF578	Q96N58	590 aa	Predicted RBP	13.16	□□□□□ -0.3
ATL2-215	ENST00000486927	KLHL11	Q9NVR0	708 aa		13.16	□□□□□ -0.3
ATL2-215	ENST00000486927	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	13.16	□□□□□ -0.3
ATL2-215	ENST00000486927	SSUH2	Q9Y2M2	353 aa		13.16	□□□□□ -0.3
ATL2-215	ENST00000486927	CEP83	Q9Y592	693 aa		13.16	□□□□□ -0.3
ATL2-215	ENST00000486927	OR51B4	Q9Y5P0	310 aa		13.16	□□□□□ -0.3
ATL2-215	ENST00000486927	DXO	O77932	396 aa	Known RBP	13.15	□□□□□ -0.3
ATL2-215	ENST00000486927	CKMT1A	P12532	417 aa		13.15	□□□□□ -0.3
ATL2-215	ENST00000486927	BRD2	P25440	801 aa	Known RBP	13.15	□□□□□ -0.3
ATL2-215	ENST00000486927	MAT2A	P31153	395 aa	Known RBP	13.15	□□□□□ -0.3
ATL2-215	ENST00000486927	ACADSB	P45954	432 aa		13.15	□□□□□ -0.3
ATL2-215	ENST00000486927	OXCT1	P55809	520 aa		13.15	□□□□□ -0.3
ATL2-215	ENST00000486927	TAS2R38	P59533	333 aa		13.15	□□□□□ -0.3
ATL2-215	ENST00000486927	KRT85	P78386	507 aa		13.15	□□□□□ -0.3
ATL2-215	ENST00000486927	NUCB2	P80303	420 aa		13.15	□□□□□ -0.3
ATL2-215	ENST00000486927	CCDC173	Q0VFZ6	552 aa		13.15	□□□□□ -0.3
ATL2-215	ENST00000486927	KCNH2	Q12809	1159 aa		13.15	□□□□□ -0.3
ATL2-215	ENST00000486927	CNTN1	Q12860	1018 aa		13.15	□□□□□ -0.3
ATL2-215	ENST00000486927	ZNF658	Q5TYW1	1059 aa	Predicted RBP	13.15	□□□□□ -0.3
ATL2-215	ENST00000486927	AGBL4	Q5VU57	503 aa		13.15	□□□□□ -0.3
ATL2-215	ENST00000486927	NEK5	Q6P3R8	708 aa		13.15	□□□□□ -0.3
ATL2-215	ENST00000486927	CCAR2	Q8N163	923 aa	Known RBP	13.15	□□□□□ -0.3
ATL2-215	ENST00000486927	TMEM145	Q8NBT3	493 aa		13.15	□□□□□ -0.3
ATL2-215	ENST00000486927	OR4C6	Q8NH72	309 aa		13.15	□□□□□ -0.3
ATL2-215	ENST00000486927	SPATA20	Q8TB22	786 aa		13.15	□□□□□ -0.3
ATL2-215	ENST00000486927	GSDMA	Q96QA5	445 aa		13.15	□□□□□ -0.3
ATL2-215	ENST00000486927	FEM1A	Q9BSK4	669 aa		13.15	□□□□□ -0.3
ATL2-215	ENST00000486927	METTL14	Q9HCE5	456 aa	Known RBP	13.15	□□□□□ -0.3
ATL2-215	ENST00000486927	TJP2	Q9UDY2	1190 aa		13.15	□□□□□ -0.3
ATL2-215	ENST00000486927	COL5A1	P20908	1838 aa	Predicted RBP	13.15	□□□□□ -0.3
ATL2-215	ENST00000486927	MUC22	E2RYF6	1773 aa	Predicted RBP	13.15	□□□□□ -0.31
ATL2-215	ENST00000486927	ERVH48-1	M5A8F1	160 aa		13.14	□□□□□ -0.31
ATL2-215	ENST00000486927	ALOX15B	O15296	676 aa		13.14	□□□□□ -0.31
ATL2-215	ENST00000486927	P4HA2	O15460	535 aa		13.14	□□□□□ -0.31
ATL2-215	ENST00000486927	OPA1	O60313	960 aa		13.14	□□□□□ -0.31
ATL2-215	ENST00000486927	TRUB2	O95900	331 aa	Known RBP	13.14	□□□□□ -0.31
ATL2-215	ENST00000486927	MOCS2	O96007	188 aa	Predicted RBP	13.14	□□□□□ -0.31
ATL2-215	ENST00000486927	HSP90AA1	P07900	732 aa	Known RBP	13.14	□□□□□ -0.31
ATL2-215	ENST00000486927	PDGFRA	P16234	1089 aa		13.14	□□□□□ -0.31
ATL2-215	ENST00000486927	LSS	P48449	732 aa		13.14	□□□□□ -0.31
ATL2-215	ENST00000486927	GCNT1	Q02742	428 aa		13.14	□□□□□ -0.31
ATL2-215	ENST00000486927	LRRC63	Q05C16	580 aa		13.14	□□□□□ -0.31
ATL2-215	ENST00000486927	KCNMA1	Q12791	1236 aa		13.14	□□□□□ -0.31
ATL2-215	ENST00000486927	DLG2	Q15700	870 aa		13.14	□□□□□ -0.31
ATL2-215	ENST00000486927	SETMAR	Q53H47	684 aa	Predicted RBP	13.14	□□□□□ -0.31
ATL2-215	ENST00000486927	CXorf57	Q6NSI4	855 aa	Known RBP	13.14	□□□□□ -0.31
ATL2-215	ENST00000486927	FBXL22	Q6P050	247 aa		13.14	□□□□□ -0.31
ATL2-215	ENST00000486927	DSG4	Q86SJ6	1040 aa		13.14	□□□□□ -0.31
ATL2-215	ENST00000486927	LSMEM2	Q8N112	164 aa		13.14	□□□□□ -0.31
ATL2-215	ENST00000486927	EHBP1	Q8NDI1	1231 aa		13.14	□□□□□ -0.31
ATL2-215	ENST00000486927	ZNF248	Q8NDW4	579 aa		13.14	□□□□□ -0.31
ATL2-215	ENST00000486927	SNRNP27	Q8WVK2	155 aa	Known RBP	13.14	□□□□□ -0.31
ATL2-215	ENST00000486927	OR8D1	Q8WZ84	308 aa		13.14	□□□□□ -0.31
ATL2-215	ENST00000486927	ERCC4	Q92889	916 aa	Predicted RBP	13.14	□□□□□ -0.31
ATL2-215	ENST00000486927	NT5C1B	Q96P26	610 aa		13.14	□□□□□ -0.31
ATL2-215	ENST00000486927	MED15	Q96RN5	788 aa		13.14	□□□□□ -0.31
ATL2-215	ENST00000486927	PPP1R9B	Q96SB3	815 aa		13.14	□□□□□ -0.31
ATL2-215	ENST00000486927	TSG101	Q99816	390 aa		13.14	□□□□□ -0.31
ATL2-215	ENST00000486927	TRIM62	Q9BVG3	475 aa		13.14	□□□□□ -0.31
ATL2-215	ENST00000486927	SCAND2P	Q9GZW5	306 aa	Predicted RBP	13.14	□□□□□ -0.31
ATL2-215	ENST00000486927	POPDC2	Q9HBU9	364 aa		13.14	□□□□□ -0.31
ATL2-215	ENST00000486927	PREB	Q9HCU5	417 aa		13.14	□□□□□ -0.31
ATL2-215	ENST00000486927	RMND1	Q9NWS8	449 aa		13.14	□□□□□ -0.31
ATL2-215	ENST00000486927	UCKL1	Q9NWZ5	548 aa		13.14	□□□□□ -0.31
ATL2-215	ENST00000486927	SLC12A6	Q9UHW9	1150 aa		13.14	□□□□□ -0.31
ATL2-215	ENST00000486927	CA5B	Q9Y2D0	317 aa		13.14	□□□□□ -0.31
ATL2-215	ENST00000486927	ZNF462	Q96JM2	2506 aa		13.14	□□□□□ -0.31
ATL2-215	ENST00000486927		F5H5T6	163 aa		13.13	□□□□□ -0.31
ATL2-215	ENST00000486927	SDC3	O75056	442 aa		13.13	□□□□□ -0.31
ATL2-215	ENST00000486927	APOE	P02649	317 aa		13.13	□□□□□ -0.31
ATL2-215	ENST00000486927	ERVPABLB-1	P60509	514 aa		13.13	□□□□□ -0.31
ATL2-215	ENST00000486927	CXADR	P78310	365 aa		13.13	□□□□□ -0.31
ATL2-215	ENST00000486927	PITX1	P78337	314 aa	Predicted RBP	13.13	□□□□□ -0.31
ATL2-215	ENST00000486927	PNOC	Q13519	176 aa		13.13	□□□□□ -0.31
ATL2-215	ENST00000486927	TAF5	Q15542	800 aa		13.13	□□□□□ -0.31
ATL2-215	ENST00000486927	MEA1	Q16626	185 aa		13.13	□□□□□ -0.31
ATL2-215	ENST00000486927	C5orf22	Q49AR2	442 aa		13.13	□□□□□ -0.31
ATL2-215	ENST00000486927	TTC39B	Q5VTQ0	682 aa	Predicted RBP	13.13	□□□□□ -0.31
ATL2-215	ENST00000486927	DENND1B	Q6P3S1	775 aa		13.13	□□□□□ -0.31
ATL2-215	ENST00000486927	KDM7A	Q6ZMT4	941 aa		13.13	□□□□□ -0.31
ATL2-215	ENST00000486927	RRAGA	Q7L523	313 aa		13.13	□□□□□ -0.31
ATL2-215	ENST00000486927	CHSY1	Q86X52	802 aa		13.13	□□□□□ -0.31
ATL2-215	ENST00000486927	PPM1K	Q8N3J5	372 aa		13.13	□□□□□ -0.31
ATL2-215	ENST00000486927	ATP6V0D2	Q8N8Y2	350 aa		13.13	□□□□□ -0.31
ATL2-215	ENST00000486927	FAM181A	Q8N9Y4	354 aa		13.13	□□□□□ -0.31
ATL2-215	ENST00000486927	OR52K2	Q8NGK3	314 aa		13.13	□□□□□ -0.31
ATL2-215	ENST00000486927	FAM149B1	Q96BN6	582 aa		13.13	□□□□□ -0.31

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