RNA–Protein interactions for RNA: ENST00000486519.5

U2AF1-211, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 3

Gene U2AF1, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-211ENST00000486519 PITRM1Q5JRX3 1037 aa15.72■□□□□ 0.11
U2AF1-211ENST00000486519 PPP1R26Q5T8A7 1209 aaPredicted RBP15.72■□□□□ 0.11
U2AF1-211ENST00000486519 NADSYN1Q6IA69 706 aa15.72■□□□□ 0.11
U2AF1-211ENST00000486519 DTX1Q86Y01 620 aa15.72■□□□□ 0.11
U2AF1-211ENST00000486519 MFN1Q8IWA4 741 aa15.72■□□□□ 0.11
U2AF1-211ENST00000486519 EDEM1Q92611 657 aa15.72■□□□□ 0.11
U2AF1-211ENST00000486519 PHF12Q96QT6 1004 aa15.72■□□□□ 0.11
U2AF1-211ENST00000486519 CDK5RAP1Q96SZ6 601 aaKnown RBP15.72■□□□□ 0.11
U2AF1-211ENST00000486519 CCDC3Q9BQI4 270 aa15.72■□□□□ 0.11
U2AF1-211ENST00000486519 AGPAT3Q9NRZ7 376 aa15.72■□□□□ 0.11
U2AF1-211ENST00000486519 A0A1W2PQU0 124 aa15.71■□□□□ 0.11
U2AF1-211ENST00000486519 NEMP2A6NFY4 417 aa15.71■□□□□ 0.11
U2AF1-211ENST00000486519 SEMA7AO75326 666 aa15.71■□□□□ 0.11
U2AF1-211ENST00000486519 AGFG2O95081 481 aa15.71■□□□□ 0.11
U2AF1-211ENST00000486519 C4BPAP04003 597 aaKnown RBP15.71■□□□□ 0.11
U2AF1-211ENST00000486519 ASLP04424 464 aa15.71■□□□□ 0.11
U2AF1-211ENST00000486519 DCTP40126 519 aa15.71■□□□□ 0.11
U2AF1-211ENST00000486519 MLLT10P55197 1068 aa15.71■□□□□ 0.11
U2AF1-211ENST00000486519 ALCAMQ13740 583 aa15.71■□□□□ 0.11
U2AF1-211ENST00000486519 SPIDRQ14159 915 aa15.71■□□□□ 0.11
U2AF1-211ENST00000486519 NR0B2Q15466 257 aa15.71■□□□□ 0.11
U2AF1-211ENST00000486519 BORAQ6PGQ7 559 aa15.71■□□□□ 0.11
U2AF1-211ENST00000486519 Q6ZSR6 202 aa15.71■□□□□ 0.11
U2AF1-211ENST00000486519 ABI3BPQ7Z7G0 1075 aa15.71■□□□□ 0.11
U2AF1-211ENST00000486519 FIBINQ8TAL6 211 aa15.71■□□□□ 0.11
U2AF1-211ENST00000486519 BMFQ96LC9 184 aa15.71■□□□□ 0.11
U2AF1-211ENST00000486519 DUSP16Q9BY84 665 aa15.71■□□□□ 0.11
U2AF1-211ENST00000486519 TCEAL2Q9H3H9 227 aaPredicted RBP15.71■□□□□ 0.11
U2AF1-211ENST00000486519 KDM4CQ9H3R0 1056 aa15.71■□□□□ 0.11
U2AF1-211ENST00000486519 PREBQ9HCU5 417 aa15.71■□□□□ 0.11
U2AF1-211ENST00000486519 TMPRSS4Q9NRS4 437 aa15.71■□□□□ 0.11
U2AF1-211ENST00000486519 GPR27Q9NS67 375 aa15.71■□□□□ 0.11
U2AF1-211ENST00000486519 LIMCH1Q9UPQ0 1083 aa15.71■□□□□ 0.11
U2AF1-211ENST00000486519 ZFR2Q9UPR6 939 aaKnown RBP15.71■□□□□ 0.11
U2AF1-211ENST00000486519 TRPM6Q9BX84 2022 aa15.71■□□□□ 0.11
U2AF1-211ENST00000486519 OTOGQ6ZRI0 2925 aa15.7■□□□□ 0.1
U2AF1-211ENST00000486519 LRRIQ3A6PVS8 624 aaPredicted RBP15.7■□□□□ 0.1
U2AF1-211ENST00000486519 TULP2O00295 520 aa15.7■□□□□ 0.1
U2AF1-211ENST00000486519 KRT7P08729 469 aa15.7■□□□□ 0.1
U2AF1-211ENST00000486519 NUDT1P36639 197 aa15.7■□□□□ 0.1
U2AF1-211ENST00000486519 LONP1P36776 959 aaKnown RBP15.7■□□□□ 0.1
U2AF1-211ENST00000486519 UNC93AQ86WB7 457 aa15.7■□□□□ 0.1
U2AF1-211ENST00000486519 SRRM1Q8IYB3 904 aaKnown RBP15.7■□□□□ 0.1
U2AF1-211ENST00000486519 RBFAQ8N0V3 343 aa15.7■□□□□ 0.1
U2AF1-211ENST00000486519 CFAP52Q8N1V2 620 aa15.7■□□□□ 0.1
U2AF1-211ENST00000486519 CARNMT1Q8N4J0 409 aa15.7■□□□□ 0.1
U2AF1-211ENST00000486519 ZSCAN1Q8NBB4 408 aa15.7■□□□□ 0.1
U2AF1-211ENST00000486519 FRS2Q8WU20 508 aa15.7■□□□□ 0.1
U2AF1-211ENST00000486519 KIAA1586Q9HCI6 787 aa15.7■□□□□ 0.1
U2AF1-211ENST00000486519 EVA1BQ9NVM1 165 aa15.7■□□□□ 0.1
U2AF1-211ENST00000486519 PNMA8BQ9ULN7 279 aaPredicted RBP15.7■□□□□ 0.1
U2AF1-211ENST00000486519 DAAM1Q9Y4D1 1078 aa15.7■□□□□ 0.1
U2AF1-211ENST00000486519 POLQO75417 2590 aa15.7■□□□□ 0.1
U2AF1-211ENST00000486519 UNC13CQ8NB66 2214 aa15.7■□□□□ 0.1
U2AF1-211ENST00000486519 A0A087X0B3 334 aa15.69■□□□□ 0.1
U2AF1-211ENST00000486519 POM121BA6NF01 834 aa15.69■□□□□ 0.1
U2AF1-211ENST00000486519 C9orf172C9J069 976 aa15.69■□□□□ 0.1
U2AF1-211ENST00000486519 RAD51BO15315 384 aa15.69■□□□□ 0.1
U2AF1-211ENST00000486519 NVLO15381 856 aaKnown RBP15.69■□□□□ 0.1
U2AF1-211ENST00000486519 SLC7A4O43246 635 aa15.69■□□□□ 0.1
U2AF1-211ENST00000486519 SPINT1O43278 529 aa15.69■□□□□ 0.1
U2AF1-211ENST00000486519 GCATO75600 419 aa15.69■□□□□ 0.1
U2AF1-211ENST00000486519 NR1D1P20393 614 aa15.69■□□□□ 0.1
U2AF1-211ENST00000486519 GNLYP22749 145 aa15.69■□□□□ 0.1
U2AF1-211ENST00000486519 HNRNPKP61978 463 aaKnown RBP eCLIP15.69■□□□□ 0.1
U2AF1-211ENST00000486519 DLG4P78352 724 aa15.69■□□□□ 0.1
U2AF1-211ENST00000486519 FGL2Q14314 439 aa15.69■□□□□ 0.1
U2AF1-211ENST00000486519 ELAVL3Q14576 367 aaKnown RBP15.69■□□□□ 0.1
U2AF1-211ENST00000486519 RAB41Q5JT25 222 aa15.69■□□□□ 0.1
U2AF1-211ENST00000486519 PIP5KL1Q5T9C9 394 aa15.69■□□□□ 0.1
U2AF1-211ENST00000486519 SEL1L3Q68CR1 1132 aa15.69■□□□□ 0.1
U2AF1-211ENST00000486519 PTAR1Q7Z6K3 402 aaPredicted RBP15.69■□□□□ 0.1
U2AF1-211ENST00000486519 TICAM1Q8IUC6 712 aa15.69■□□□□ 0.1
U2AF1-211ENST00000486519 KDM1BQ8NB78 822 aa15.69■□□□□ 0.1
U2AF1-211ENST00000486519 TPCN2Q8NHX9 752 aa15.69■□□□□ 0.1
U2AF1-211ENST00000486519 LMX1AQ8TE12 382 aa15.69■□□□□ 0.1
U2AF1-211ENST00000486519 BOCQ9BWV1 1114 aa15.69■□□□□ 0.1
U2AF1-211ENST00000486519 ULBP1Q9BZM6 244 aa15.69■□□□□ 0.1
U2AF1-211ENST00000486519 A0A1W2PQM1 296 aa15.68■□□□□ 0.1
U2AF1-211ENST00000486519 AQP9O43315 295 aa15.68■□□□□ 0.1
U2AF1-211ENST00000486519 CSF2P04141 144 aa15.68■□□□□ 0.1
U2AF1-211ENST00000486519 SRPRAP08240 638 aaKnown RBP15.68■□□□□ 0.1
U2AF1-211ENST00000486519 NME1P15531 152 aaKnown RBP15.68■□□□□ 0.1
U2AF1-211ENST00000486519 ZNF445P59923 1031 aa15.68■□□□□ 0.1
U2AF1-211ENST00000486519 ECT2LQ008S8 904 aa15.68■□□□□ 0.1
U2AF1-211ENST00000486519 C1orf61Q13536 156 aa15.68■□□□□ 0.1
U2AF1-211ENST00000486519 MPP7Q5T2T1 576 aa15.68■□□□□ 0.1
U2AF1-211ENST00000486519 SV2BQ7L1I2 683 aa15.68■□□□□ 0.1
U2AF1-211ENST00000486519 DSG4Q86SJ6 1040 aa15.68■□□□□ 0.1
U2AF1-211ENST00000486519 PIGZQ86VD9 579 aa15.68■□□□□ 0.1
U2AF1-211ENST00000486519 NELFCDQ8IXH7 590 aa15.68■□□□□ 0.1
U2AF1-211ENST00000486519 SPATA20Q8TB22 786 aa15.68■□□□□ 0.1
U2AF1-211ENST00000486519 USP7Q93009 1102 aa15.68■□□□□ 0.1
U2AF1-211ENST00000486519 IFT43Q96FT9 208 aa15.68■□□□□ 0.1
U2AF1-211ENST00000486519 STK17AQ9UEE5 414 aa15.68■□□□□ 0.1
U2AF1-211ENST00000486519 SALL4Q9UJQ4 1053 aa15.68■□□□□ 0.1
U2AF1-211ENST00000486519 HBS1LQ9Y450 684 aaKnown RBP15.68■□□□□ 0.1
U2AF1-211ENST00000486519 LOXL2Q9Y4K0 774 aa15.68■□□□□ 0.1
U2AF1-211ENST00000486519 ZFHX3Q15911 3703 aa15.68■□□□□ 0.1
U2AF1-211ENST00000486519 D6RAR5 112 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms