RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 EXD1Q8NHP7 514 aa11.68□□□□□ -0.54
NUP50-216ENST00000486184 FAM71BQ8TC56 605 aa11.68□□□□□ -0.54
NUP50-216ENST00000486184 KCNV2Q8TDN2 545 aa11.68□□□□□ -0.54
NUP50-216ENST00000486184 RAPGEF5Q92565 580 aa11.68□□□□□ -0.54
NUP50-216ENST00000486184 ACDQ96AP0 544 aa11.68□□□□□ -0.54
NUP50-216ENST00000486184 FEM1AQ9BSK4 669 aa11.68□□□□□ -0.54
NUP50-216ENST00000486184 C1QTNF1Q9BXJ1 281 aa11.68□□□□□ -0.54
NUP50-216ENST00000486184 MAGEH1Q9H213 219 aa11.68□□□□□ -0.54
NUP50-216ENST00000486184 RBM12Q9NTZ6 932 aaKnown RBP11.68□□□□□ -0.54
NUP50-216ENST00000486184 ELOVL2Q9NXB9 296 aa11.68□□□□□ -0.54
NUP50-216ENST00000486184 SLC8A2Q9UPR5 921 aa11.68□□□□□ -0.54
NUP50-216ENST00000486184 NEU3Q9UQ49 428 aa11.68□□□□□ -0.54
NUP50-216ENST00000486184 MTF2Q9Y483 593 aaPredicted RBP11.68□□□□□ -0.54
NUP50-216ENST00000486184 PCDHA3Q9Y5H8 950 aa11.68□□□□□ -0.54
NUP50-216ENST00000486184 KMT2EQ8IZD2 1858 aa11.68□□□□□ -0.54
NUP50-216ENST00000486184 MYO18AQ92614 2054 aaKnown RBP11.67□□□□□ -0.54
NUP50-216ENST00000486184 MUC22E2RYF6 1773 aaPredicted RBP11.67□□□□□ -0.54
NUP50-216ENST00000486184 FAM86C2PA6NEL3 165 aa11.67□□□□□ -0.54
NUP50-216ENST00000486184 ARHGAP42A6NI28 874 aa11.67□□□□□ -0.54
NUP50-216ENST00000486184 SHISA7A6NL88 538 aa11.67□□□□□ -0.54
NUP50-216ENST00000486184 ZNF487B1APH4 448 aa11.67□□□□□ -0.54
NUP50-216ENST00000486184 PRRT4C9JH25 899 aa11.67□□□□□ -0.54
NUP50-216ENST00000486184 K7EQS6 105 aa11.67□□□□□ -0.54
NUP50-216ENST00000486184 CBX4O00257 560 aa11.67□□□□□ -0.54
NUP50-216ENST00000486184 DFFAO00273 331 aa11.67□□□□□ -0.54
NUP50-216ENST00000486184 DLL1O00548 723 aa11.67□□□□□ -0.54
NUP50-216ENST00000486184 APOL1O14791 398 aa11.67□□□□□ -0.54
NUP50-216ENST00000486184 NPC1O15118 1278 aa11.67□□□□□ -0.54
NUP50-216ENST00000486184 DCNP07585 359 aaKnown RBP11.67□□□□□ -0.54
NUP50-216ENST00000486184 ZFXP17010 805 aaPredicted RBP11.67□□□□□ -0.54
NUP50-216ENST00000486184 MZF1P28698 734 aaPredicted RBP11.67□□□□□ -0.54
NUP50-216ENST00000486184 RPS9P46781 194 aaKnown RBP11.67□□□□□ -0.54
NUP50-216ENST00000486184 MARCKSL1P49006 195 aa11.67□□□□□ -0.54
NUP50-216ENST00000486184 NUMBP49757 651 aa11.67□□□□□ -0.54
NUP50-216ENST00000486184 ARSEP51690 589 aa11.67□□□□□ -0.54
NUP50-216ENST00000486184 NDST2P52849 883 aa11.67□□□□□ -0.54
NUP50-216ENST00000486184 PLK1P53350 603 aa11.67□□□□□ -0.54
NUP50-216ENST00000486184 COPS2P61201 443 aa11.67□□□□□ -0.54
NUP50-216ENST00000486184 MRPS21P82921 87 aaKnown RBP11.67□□□□□ -0.54
NUP50-216ENST00000486184 ECT2LQ008S8 904 aa11.67□□□□□ -0.54
NUP50-216ENST00000486184 MESP2Q0VG99 397 aa11.67□□□□□ -0.54
NUP50-216ENST00000486184 MMRN1Q13201 1228 aa11.67□□□□□ -0.54
NUP50-216ENST00000486184 TFDP2Q14188 446 aa11.67□□□□□ -0.54
NUP50-216ENST00000486184 RPS6KA1Q15418 735 aa11.67□□□□□ -0.54
NUP50-216ENST00000486184 PARP15Q460N3 678 aa11.67□□□□□ -0.54
NUP50-216ENST00000486184 FNDC3BQ53EP0 1204 aaKnown RBP11.67□□□□□ -0.54
NUP50-216ENST00000486184 TFDP3Q5H9I0 405 aa11.67□□□□□ -0.54
NUP50-216ENST00000486184 ZNF569Q5MCW4 686 aa11.67□□□□□ -0.54
NUP50-216ENST00000486184 CCDC181Q5TID7 509 aa11.67□□□□□ -0.54
NUP50-216ENST00000486184 CWF19L1Q69YN2 538 aaKnown RBP11.67□□□□□ -0.54
NUP50-216ENST00000486184 RETSATQ6NUM9 610 aa11.67□□□□□ -0.54
NUP50-216ENST00000486184 SPOCD1Q6ZMY3 1216 aa11.67□□□□□ -0.54
NUP50-216ENST00000486184 BMP8AQ7Z5Y6 402 aa11.67□□□□□ -0.54
NUP50-216ENST00000486184 KIAA0907Q7Z7F0 614 aaPredicted RBP11.67□□□□□ -0.54
NUP50-216ENST00000486184 REXO1L1PQ8IX06 675 aa11.67□□□□□ -0.54
NUP50-216ENST00000486184 CHPFQ8IZ52 775 aa11.67□□□□□ -0.54
NUP50-216ENST00000486184 APCDD1Q8J025 514 aa11.67□□□□□ -0.54
NUP50-216ENST00000486184 UMODL1-AS1Q8N2C9 162 aa11.67□□□□□ -0.54
NUP50-216ENST00000486184 DCAF4L2Q8NA75 395 aa11.67□□□□□ -0.54
NUP50-216ENST00000486184 OR7D4Q8NG98 312 aa11.67□□□□□ -0.54
NUP50-216ENST00000486184 RPLP0P6Q8NHW5 317 aa11.67□□□□□ -0.54
NUP50-216ENST00000486184 TSC1Q92574 1164 aa11.67□□□□□ -0.54
NUP50-216ENST00000486184 KRT35Q92764 455 aa11.67□□□□□ -0.54
NUP50-216ENST00000486184 IER2Q9BTL4 223 aa11.67□□□□□ -0.54
NUP50-216ENST00000486184 PRDM16Q9HAZ2 1276 aa11.67□□□□□ -0.54
NUP50-216ENST00000486184 ZNF212Q9UDV6 495 aa11.67□□□□□ -0.54
NUP50-216ENST00000486184 PACSIN2Q9UNF0 486 aaPredicted RBP11.67□□□□□ -0.54
NUP50-216ENST00000486184 A0A0D9SEW6 157 aa11.66□□□□□ -0.54
NUP50-216ENST00000486184 RASA4BC9J798 803 aa11.66□□□□□ -0.54
NUP50-216ENST00000486184 DCLK1O15075 740 aa11.66□□□□□ -0.54
NUP50-216ENST00000486184 RASA4O43374 803 aa11.66□□□□□ -0.54
NUP50-216ENST00000486184 KLF8O95600 359 aaPredicted RBP11.66□□□□□ -0.54
NUP50-216ENST00000486184 SRPRAP08240 638 aaKnown RBP11.66□□□□□ -0.54
NUP50-216ENST00000486184 DLDP09622 509 aaKnown RBP11.66□□□□□ -0.54
NUP50-216ENST00000486184 GEMIN4P57678 1058 aaKnown RBP11.66□□□□□ -0.54
NUP50-216ENST00000486184 DYNLT1P63172 113 aa11.66□□□□□ -0.54
NUP50-216ENST00000486184 HSF5Q4G112 596 aaPredicted RBP11.66□□□□□ -0.54
NUP50-216ENST00000486184 TMEM31Q5JXX7 168 aa11.66□□□□□ -0.54
NUP50-216ENST00000486184 EOGTQ5NDL2 527 aa11.66□□□□□ -0.54
NUP50-216ENST00000486184 SEL1L2Q5TEA6 688 aa11.66□□□□□ -0.54
NUP50-216ENST00000486184 EGFLAMQ63HQ2 1017 aa11.66□□□□□ -0.54
NUP50-216ENST00000486184 KAZNQ674X7 775 aa11.66□□□□□ -0.54
NUP50-216ENST00000486184 MFSD7Q6UXD7 560 aa11.66□□□□□ -0.54
NUP50-216ENST00000486184 SERPINA13PQ6UXR4 307 aa11.66□□□□□ -0.54
NUP50-216ENST00000486184 ADIPOR2Q86V24 386 aa11.66□□□□□ -0.54
NUP50-216ENST00000486184 SFTPA1Q8IWL2 248 aa11.66□□□□□ -0.54
NUP50-216ENST00000486184 ALLCQ8N6M5 410 aa11.66□□□□□ -0.54
NUP50-216ENST00000486184 USP33Q8TEY7 942 aa11.66□□□□□ -0.54
NUP50-216ENST00000486184 CYB5D2Q8WUJ1 264 aa11.66□□□□□ -0.54
NUP50-216ENST00000486184 SORCS1Q8WY21 1168 aa11.66□□□□□ -0.54
NUP50-216ENST00000486184 ARHGEF2Q92974 986 aaKnown RBP11.66□□□□□ -0.54
NUP50-216ENST00000486184 TTC17Q96AE7 1141 aa11.66□□□□□ -0.54
NUP50-216ENST00000486184 CLDN23Q96B33 292 aa11.66□□□□□ -0.54
NUP50-216ENST00000486184 FAF2Q96CS3 445 aa11.66□□□□□ -0.54
NUP50-216ENST00000486184 HES6Q96HZ4 224 aa11.66□□□□□ -0.54
NUP50-216ENST00000486184 CELF6Q96J87 481 aaKnown RBP11.66□□□□□ -0.54
NUP50-216ENST00000486184 LMLNQ96KR4 655 aa11.66□□□□□ -0.54
NUP50-216ENST00000486184 RNF157Q96PX1 679 aa11.66□□□□□ -0.54
NUP50-216ENST00000486184 SP110Q9HB58 689 aa11.66□□□□□ -0.54
NUP50-216ENST00000486184 NDFIP2Q9NV92 336 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms