RNA–Protein interactions for RNA: ENST00000486085.5

RTN4-214, Transcript of reticulon 4, humanhuman

TSL 3

Gene RTN4, Length 955 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-214ENST00000486085 GTF2A1LQ9UNN4 478 aa6.66□□□□□ -1.34
RTN4-214ENST00000486085 SYNMO15061 1565 aa6.65□□□□□ -1.34
RTN4-214ENST00000486085 MADDQ8WXG6 1647 aa6.65□□□□□ -1.34
RTN4-214ENST00000486085 PYGLP06737 847 aa6.65□□□□□ -1.34
RTN4-214ENST00000486085 ST6GAL1P15907 406 aa6.65□□□□□ -1.34
RTN4-214ENST00000486085 CDK18Q07002 472 aa6.65□□□□□ -1.34
RTN4-214ENST00000486085 SLC10A2Q12908 348 aaPredicted RBP6.65□□□□□ -1.34
RTN4-214ENST00000486085 EFR3AQ14156 821 aa6.65□□□□□ -1.34
RTN4-214ENST00000486085 ZNF268Q14587 947 aaPredicted RBP6.65□□□□□ -1.34
RTN4-214ENST00000486085 MIS18BP1Q6P0N0 1132 aa6.65□□□□□ -1.34
RTN4-214ENST00000486085 ZNF813Q6ZN06 617 aa6.65□□□□□ -1.34
RTN4-214ENST00000486085 ZNF66Q6ZN08 573 aa6.65□□□□□ -1.34
RTN4-214ENST00000486085 PRIMA1Q86XR5 153 aa6.65□□□□□ -1.34
RTN4-214ENST00000486085 UEVLDQ8IX04 471 aa6.65□□□□□ -1.34
RTN4-214ENST00000486085 LINS1Q8NG48 757 aa6.65□□□□□ -1.34
RTN4-214ENST00000486085 KCNJ9Q92806 393 aa6.65□□□□□ -1.34
RTN4-214ENST00000486085 MAP4K1Q92918 833 aa6.65□□□□□ -1.34
RTN4-214ENST00000486085 RBM17Q96I25 401 aaKnown RBP6.65□□□□□ -1.34
RTN4-214ENST00000486085 FCRL5Q96RD9 977 aa6.65□□□□□ -1.34
RTN4-214ENST00000486085 HERC2P3Q9BVR0 1158 aa6.65□□□□□ -1.34
RTN4-214ENST00000486085 GATA5Q9BWX5 397 aaPredicted RBP6.65□□□□□ -1.34
RTN4-214ENST00000486085 CLPBQ9H078 707 aa6.65□□□□□ -1.34
RTN4-214ENST00000486085 SLITRK6Q9H5Y7 841 aa6.65□□□□□ -1.34
RTN4-214ENST00000486085 MLXIPLQ9NP71 852 aa6.65□□□□□ -1.34
RTN4-214ENST00000486085 PDGFCQ9NRA1 345 aa6.65□□□□□ -1.34
RTN4-214ENST00000486085 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.65□□□□□ -1.34
RTN4-214ENST00000486085 C9orf78Q9NZ63 289 aaPredicted RBP6.65□□□□□ -1.34
RTN4-214ENST00000486085 SPATA31A5Q5VU36 1347 aa6.65□□□□□ -1.35
RTN4-214ENST00000486085 SPATA31A7Q8IWB4 1347 aa6.65□□□□□ -1.35
RTN4-214ENST00000486085 SPATA31E1Q6ZUB1 1445 aa6.65□□□□□ -1.35
RTN4-214ENST00000486085 LMTK3Q96Q04 1460 aa6.65□□□□□ -1.35
RTN4-214ENST00000486085 C3P01024 1663 aa6.65□□□□□ -1.35
RTN4-214ENST00000486085 ZNF142P52746 1687 aaPredicted RBP6.65□□□□□ -1.35
RTN4-214ENST00000486085 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.64□□□□□ -1.35
RTN4-214ENST00000486085 RRN3P2A6NIE6 340 aa6.64□□□□□ -1.35
RTN4-214ENST00000486085 NCAM2O15394 837 aa6.64□□□□□ -1.35
RTN4-214ENST00000486085 CSF1P09603 554 aa6.64□□□□□ -1.35
RTN4-214ENST00000486085 LYL1P12980 280 aa6.64□□□□□ -1.35
RTN4-214ENST00000486085 ACP5P13686 325 aa6.64□□□□□ -1.35
RTN4-214ENST00000486085 TGM2P21980 687 aa6.64□□□□□ -1.35
RTN4-214ENST00000486085 GPR162Q16538 588 aa6.64□□□□□ -1.35
RTN4-214ENST00000486085 CTXN3Q4LDR2 81 aa6.64□□□□□ -1.35
RTN4-214ENST00000486085 CEP78Q5JTW2 689 aa6.64□□□□□ -1.35
RTN4-214ENST00000486085 CPOQ8IVL8 374 aa6.64□□□□□ -1.35
RTN4-214ENST00000486085 DNAJC10Q8IXB1 793 aa6.64□□□□□ -1.35
RTN4-214ENST00000486085 P2RY11Q96G91 374 aa6.64□□□□□ -1.35
RTN4-214ENST00000486085 NPAS1Q99742 590 aa6.64□□□□□ -1.35
RTN4-214ENST00000486085 SH2D3AQ9BRG2 576 aa6.64□□□□□ -1.35
RTN4-214ENST00000486085 DNAJC16Q9Y2G8 782 aa6.64□□□□□ -1.35
RTN4-214ENST00000486085 EMSYQ7Z589 1322 aa6.64□□□□□ -1.35
RTN4-214ENST00000486085 WDR17Q8IZU2 1322 aa6.64□□□□□ -1.35
RTN4-214ENST00000486085 ZFYVE9O95405 1425 aa6.64□□□□□ -1.35
RTN4-214ENST00000486085 PTPRMP28827 1452 aa6.64□□□□□ -1.35
RTN4-214ENST00000486085 ADGRB3O60242 1522 aa6.64□□□□□ -1.35
RTN4-214ENST00000486085 CCDC144AA2RUR9 1427 aa6.63□□□□□ -1.35
RTN4-214ENST00000486085 WIPF3A6NGB9 483 aa6.63□□□□□ -1.35
RTN4-214ENST00000486085 DSCR3O14972 297 aa6.63□□□□□ -1.35
RTN4-214ENST00000486085 INPPL1O15357 1258 aa6.63□□□□□ -1.35
RTN4-214ENST00000486085 PLAUP00749 431 aa6.63□□□□□ -1.35
RTN4-214ENST00000486085 POLBP06746 335 aa6.63□□□□□ -1.35
RTN4-214ENST00000486085 AKR1A1P14550 325 aa6.63□□□□□ -1.35
RTN4-214ENST00000486085 CPA1P15085 419 aa6.63□□□□□ -1.35
RTN4-214ENST00000486085 SOX2P48431 317 aa6.63□□□□□ -1.35
RTN4-214ENST00000486085 B4GALNT1Q00973 533 aa6.63□□□□□ -1.35
RTN4-214ENST00000486085 SMN1Q16637 294 aaKnown RBP6.63□□□□□ -1.35
RTN4-214ENST00000486085 RBM44Q6ZP01 1051 aaKnown RBP6.63□□□□□ -1.35
RTN4-214ENST00000486085 LRRTM4Q86VH4 590 aa6.63□□□□□ -1.35
RTN4-214ENST00000486085 DDB2Q92466 427 aa6.63□□□□□ -1.35
RTN4-214ENST00000486085 ZNF347Q96SE7 839 aa6.63□□□□□ -1.35
RTN4-214ENST00000486085 HDHD5Q9BXW7 423 aa6.63□□□□□ -1.35
RTN4-214ENST00000486085 RASSF1Q9NS23 344 aa6.63□□□□□ -1.35
RTN4-214ENST00000486085 KLHL13Q9P2N7 655 aa6.63□□□□□ -1.35
RTN4-214ENST00000486085 LRRFIP2Q9Y608 721 aaKnown RBP6.63□□□□□ -1.35
RTN4-214ENST00000486085 RBMXL2O75526 392 aaKnown RBP6.62□□□□□ -1.35
RTN4-214ENST00000486085 LATS1O95835 1130 aa6.62□□□□□ -1.35
RTN4-214ENST00000486085 TUBB4AP04350 444 aa6.62□□□□□ -1.35
RTN4-214ENST00000486085 PRPH2P23942 346 aa6.62□□□□□ -1.35
RTN4-214ENST00000486085 ANKRD1Q15327 319 aa6.62□□□□□ -1.35
RTN4-214ENST00000486085 USP13Q92995 863 aaPredicted RBP6.62□□□□□ -1.35
RTN4-214ENST00000486085 ATP2A3Q93084 1043 aa6.62□□□□□ -1.35
RTN4-214ENST00000486085 MAELQ96JY0 434 aaKnown RBP6.62□□□□□ -1.35
RTN4-214ENST00000486085 TWNKQ96RR1 684 aa6.62□□□□□ -1.35
RTN4-214ENST00000486085 CRAMP1Q96RY5 1269 aa6.62□□□□□ -1.35
RTN4-214ENST00000486085 ADARB2Q9NS39 739 aaKnown RBP6.62□□□□□ -1.35
RTN4-214ENST00000486085 GGA3Q9NZ52 723 aa6.62□□□□□ -1.35
RTN4-214ENST00000486085 SLC25A13Q9UJS0 675 aa6.62□□□□□ -1.35
RTN4-214ENST00000486085 RIMS1Q86UR5 1692 aaKnown RBP6.61□□□□□ -1.35
RTN4-214ENST00000486085 TMEM131LA2VDJ0 1609 aa6.61□□□□□ -1.35
RTN4-214ENST00000486085 CLTCL1P53675 1640 aa6.61□□□□□ -1.35
RTN4-214ENST00000486085 SLIT1O75093 1534 aa6.61□□□□□ -1.35
RTN4-214ENST00000486085 A2ML1A8K2U0 1454 aa6.61□□□□□ -1.35
RTN4-214ENST00000486085 MYOM2P54296 1465 aa6.61□□□□□ -1.35
RTN4-214ENST00000486085 ARHGAP23Q9P227 1491 aa6.61□□□□□ -1.35
RTN4-214ENST00000486085 NRXN1Q9ULB1 1477 aa6.61□□□□□ -1.35
RTN4-214ENST00000486085 UHRF1BP1Q6BDS2 1440 aa6.61□□□□□ -1.35
RTN4-214ENST00000486085 TNRQ92752 1358 aa6.61□□□□□ -1.35
RTN4-214ENST00000486085 RPGRIP1LQ68CZ1 1315 aa6.61□□□□□ -1.35
RTN4-214ENST00000486085 SLC22A23A1A5C7 686 aa6.61□□□□□ -1.35
RTN4-214ENST00000486085 NPIPB13A6NJU9 1138 aa6.61□□□□□ -1.35
RTN4-214ENST00000486085 NPIPB5A8MRT5 1133 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms