RNA–Protein interactions for RNA: ENST00000485424.1

UBA3-210, Transcript of ubiquitin like modifier activating enzyme 3, human

TSL 2

Gene UBA3, Length 652 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBA3-210	ENST00000485424	PCDHGC3	Q9UN70	934 aa		13.66	□□□□□ -0.22
UBA3-210	ENST00000485424	RAX	Q9Y2V3	346 aa		13.66	□□□□□ -0.22
UBA3-210	ENST00000485424	COL27A1	Q8IZC6	1860 aa	Predicted RBP	13.65	□□□□□ -0.22
UBA3-210	ENST00000485424	LRRK1	Q38SD2	2015 aa		13.65	□□□□□ -0.22
UBA3-210	ENST00000485424	ZNF559-ZNF177	A0A0A6YYI6	481 aa	Predicted RBP	13.65	□□□□□ -0.22
UBA3-210	ENST00000485424	BECN2	A8MW95	431 aa		13.65	□□□□□ -0.22
UBA3-210	ENST00000485424		H0Y8X5	98 aa		13.65	□□□□□ -0.22
UBA3-210	ENST00000485424	KCNK3	O14649	394 aa		13.65	□□□□□ -0.22
UBA3-210	ENST00000485424	PCDHGA12	O60330	932 aa		13.65	□□□□□ -0.22
UBA3-210	ENST00000485424	IGLV3-25	P01717	112 aa		13.65	□□□□□ -0.22
UBA3-210	ENST00000485424	ZNF18	P17022	549 aa		13.65	□□□□□ -0.22
UBA3-210	ENST00000485424	C5AR1	P21730	350 aa		13.65	□□□□□ -0.22
UBA3-210	ENST00000485424	PON1	P27169	355 aa		13.65	□□□□□ -0.22
UBA3-210	ENST00000485424	CTSK	P43235	329 aa		13.65	□□□□□ -0.22
UBA3-210	ENST00000485424	GRK6	P43250	576 aa		13.65	□□□□□ -0.22
UBA3-210	ENST00000485424	NUMB	P49757	651 aa		13.65	□□□□□ -0.22
UBA3-210	ENST00000485424	GALC	P54803	685 aa		13.65	□□□□□ -0.22
UBA3-210	ENST00000485424	BPIFB4	P59827	614 aa		13.65	□□□□□ -0.22
UBA3-210	ENST00000485424	RACK1	P63244	317 aa	Known RBP	13.65	□□□□□ -0.22
UBA3-210	ENST00000485424	IL9R	Q01113	521 aa		13.65	□□□□□ -0.22
UBA3-210	ENST00000485424	ZNF177	Q13360	481 aa	Predicted RBP	13.65	□□□□□ -0.22
UBA3-210	ENST00000485424	RAPGEF1	Q13905	1077 aa		13.65	□□□□□ -0.22
UBA3-210	ENST00000485424	ARID5B	Q14865	1188 aa		13.65	□□□□□ -0.22
UBA3-210	ENST00000485424	KIF26B	Q2KJY2	2108 aa		13.65	□□□□□ -0.22
UBA3-210	ENST00000485424	C9orf64	Q5T6V5	341 aa		13.65	□□□□□ -0.22
UBA3-210	ENST00000485424	NCEH1	Q6PIU2	408 aa		13.65	□□□□□ -0.22
UBA3-210	ENST00000485424	FAM183BP	Q6ZVS7	135 aa		13.65	□□□□□ -0.22
UBA3-210	ENST00000485424	CIR1	Q86X95	450 aa	Predicted RBP	13.65	□□□□□ -0.22
UBA3-210	ENST00000485424	STK40	Q8N2I9	435 aa		13.65	□□□□□ -0.22
UBA3-210	ENST00000485424	GALNT15	Q8N3T1	639 aa		13.65	□□□□□ -0.22
UBA3-210	ENST00000485424	C1orf131	Q8NDD1	294 aa	Known RBP	13.65	□□□□□ -0.22
UBA3-210	ENST00000485424	OR2T34	Q8NGX1	318 aa		13.65	□□□□□ -0.22
UBA3-210	ENST00000485424	OR14C36	Q8NHC7	312 aa		13.65	□□□□□ -0.22
UBA3-210	ENST00000485424	OR8D1	Q8WZ84	308 aa		13.65	□□□□□ -0.22
UBA3-210	ENST00000485424	SHC3	Q92529	594 aa		13.65	□□□□□ -0.22
UBA3-210	ENST00000485424	LMLN	Q96KR4	655 aa		13.65	□□□□□ -0.22
UBA3-210	ENST00000485424	MRGPRX3	Q96LB0	322 aa		13.65	□□□□□ -0.22
UBA3-210	ENST00000485424	NEUROG2	Q9H2A3	272 aa		13.65	□□□□□ -0.22
UBA3-210	ENST00000485424	SERGEF	Q9UGK8	458 aa		13.65	□□□□□ -0.22
UBA3-210	ENST00000485424	STAP1	Q9ULZ2	295 aa		13.65	□□□□□ -0.22
UBA3-210	ENST00000485424	TBC1D3D	A0A087WVF3	549 aa		13.64	□□□□□ -0.23
UBA3-210	ENST00000485424	TBC1D3I	A0A087WXS9	549 aa		13.64	□□□□□ -0.23
UBA3-210	ENST00000485424	TBC1D3E	A0A087X179	549 aa		13.64	□□□□□ -0.23
UBA3-210	ENST00000485424	TBC1D3K	A0A087X1G2	549 aa		13.64	□□□□□ -0.23
UBA3-210	ENST00000485424		A0A1W2PPC4	97 aa		13.64	□□□□□ -0.23
UBA3-210	ENST00000485424	TBC1D3F	A6NER0	549 aa	Predicted RBP	13.64	□□□□□ -0.23
UBA3-210	ENST00000485424	TBC1D3L	B9A6J9	549 aa		13.64	□□□□□ -0.23
UBA3-210	ENST00000485424		M0QYT0	321 aa		13.64	□□□□□ -0.23
UBA3-210	ENST00000485424	TNFSF14	O43557	240 aa		13.64	□□□□□ -0.23
UBA3-210	ENST00000485424	DAB1	O75553	588 aa		13.64	□□□□□ -0.23
UBA3-210	ENST00000485424	TBC1D3H	P0C7X1	549 aa		13.64	□□□□□ -0.23
UBA3-210	ENST00000485424	PYGB	P11216	843 aa		13.64	□□□□□ -0.23
UBA3-210	ENST00000485424	GOT1	P17174	413 aa		13.64	□□□□□ -0.23
UBA3-210	ENST00000485424	NOS2	P35228	1153 aa		13.64	□□□□□ -0.23
UBA3-210	ENST00000485424	STK19	P49842	368 aa	Predicted RBP	13.64	□□□□□ -0.23
UBA3-210	ENST00000485424	RNASE9	P60153	205 aa	Known RBP	13.64	□□□□□ -0.23
UBA3-210	ENST00000485424	PITX1	P78337	314 aa	Predicted RBP	13.64	□□□□□ -0.23
UBA3-210	ENST00000485424	SLC6A3	Q01959	620 aa		13.64	□□□□□ -0.23
UBA3-210	ENST00000485424	CAMK2B	Q13554	666 aa		13.64	□□□□□ -0.23
UBA3-210	ENST00000485424	ELAVL3	Q14576	367 aa	Known RBP	13.64	□□□□□ -0.23
UBA3-210	ENST00000485424	TAF5	Q15542	800 aa		13.64	□□□□□ -0.23
UBA3-210	ENST00000485424	SOWAHC	Q53LP3	525 aa	Predicted RBP	13.64	□□□□□ -0.23
UBA3-210	ENST00000485424	TBC1D3G	Q6DHY5	549 aa		13.64	□□□□□ -0.23
UBA3-210	ENST00000485424	TBC1D3C	Q6IPX1	549 aa		13.64	□□□□□ -0.23
UBA3-210	ENST00000485424	ZDHHC17	Q8IUH5	632 aa		13.64	□□□□□ -0.23
UBA3-210	ENST00000485424	TBC1D3	Q8IZP1	549 aa	Predicted RBP	13.64	□□□□□ -0.23
UBA3-210	ENST00000485424	MSANTD4	Q8NCY6	345 aa		13.64	□□□□□ -0.23
UBA3-210	ENST00000485424	SLC2A13	Q96QE2	648 aa		13.64	□□□□□ -0.23
UBA3-210	ENST00000485424	SIK2	Q9H0K1	926 aa		13.64	□□□□□ -0.23
UBA3-210	ENST00000485424	MUC3B	Q9H195	1237 aa		13.64	□□□□□ -0.23
UBA3-210	ENST00000485424	RRN3	Q9NYV6	651 aa		13.64	□□□□□ -0.23
UBA3-210	ENST00000485424	CHMP5	Q9NZZ3	219 aa		13.64	□□□□□ -0.23
UBA3-210	ENST00000485424	SLCO3A1	Q9UIG8	710 aa		13.64	□□□□□ -0.23
UBA3-210	ENST00000485424	VPS28	Q9UK41	221 aa		13.64	□□□□□ -0.23
UBA3-210	ENST00000485424	VANGL2	Q9ULK5	521 aa		13.64	□□□□□ -0.23
UBA3-210	ENST00000485424	TPX2	Q9ULW0	747 aa	Known RBP	13.64	□□□□□ -0.23
UBA3-210	ENST00000485424	PAXBP1	Q9Y5B6	917 aa		13.64	□□□□□ -0.23
UBA3-210	ENST00000485424	ANKRD36	A6QL64	1941 aa		13.63	□□□□□ -0.23
UBA3-210	ENST00000485424	FAM149A	A5PLN7	773 aa		13.63	□□□□□ -0.23
UBA3-210	ENST00000485424	C1QTNF3-AMACR	E9PGA6	284 aa		13.63	□□□□□ -0.23
UBA3-210	ENST00000485424	BNIP3L	O60238	219 aa		13.63	□□□□□ -0.23
UBA3-210	ENST00000485424	ERBB2	P04626	1255 aa		13.63	□□□□□ -0.23
UBA3-210	ENST00000485424	MZF1	P28698	734 aa	Predicted RBP	13.63	□□□□□ -0.23
UBA3-210	ENST00000485424	APBA1	Q02410	837 aa		13.63	□□□□□ -0.23
UBA3-210	ENST00000485424	AUH	Q13825	339 aa	Known RBP	13.63	□□□□□ -0.23
UBA3-210	ENST00000485424	SMAD1	Q15797	465 aa	Known RBP	13.63	□□□□□ -0.23
UBA3-210	ENST00000485424	VWA3B	Q502W6	1294 aa		13.63	□□□□□ -0.23
UBA3-210	ENST00000485424	CCDC157	Q569K6	752 aa		13.63	□□□□□ -0.23
UBA3-210	ENST00000485424	FAM46C	Q5VWP2	391 aa		13.63	□□□□□ -0.23
UBA3-210	ENST00000485424	SMYD5	Q6GMV2	418 aa		13.63	□□□□□ -0.23
UBA3-210	ENST00000485424	FBXL22	Q6P050	247 aa		13.63	□□□□□ -0.23
UBA3-210	ENST00000485424	RAB11FIP1	Q6WKZ4	1283 aa	Predicted RBP	13.63	□□□□□ -0.23
UBA3-210	ENST00000485424	PRPF39	Q86UA1	669 aa	Known RBP	13.63	□□□□□ -0.23
UBA3-210	ENST00000485424	SLC47A2	Q86VL8	602 aa		13.63	□□□□□ -0.23
UBA3-210	ENST00000485424	TMEM35B	Q8NCS4	154 aa		13.63	□□□□□ -0.23
UBA3-210	ENST00000485424	HNRNPLL	Q8WVV9	542 aa	Known RBP	13.63	□□□□□ -0.23
UBA3-210	ENST00000485424	PTPRN2	Q92932	1015 aa		13.63	□□□□□ -0.23
UBA3-210	ENST00000485424	CCDC114	Q96M63	670 aa		13.63	□□□□□ -0.23
UBA3-210	ENST00000485424	SLC6A18	Q96N87	628 aa		13.63	□□□□□ -0.23
UBA3-210	ENST00000485424	SPAG5	Q96R06	1193 aa		13.63	□□□□□ -0.23

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