RNA–Protein interactions for RNA: ENST00000485023.1

DDR1-246, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-246ENST00000485023 GLDCP23378 1020 aa16.65■□□□□ 0.26
DDR1-246ENST00000485023 NNMTP40261 264 aa16.65■□□□□ 0.26
DDR1-246ENST00000485023 PLK1P53350 603 aa16.65■□□□□ 0.26
DDR1-246ENST00000485023 SULT2A1Q06520 285 aa16.65■□□□□ 0.26
DDR1-246ENST00000485023 SCAPQ12770 1279 aa16.65■□□□□ 0.26
DDR1-246ENST00000485023 CA9Q16790 459 aa16.65■□□□□ 0.26
DDR1-246ENST00000485023 LINGO4Q6UY18 593 aa16.65■□□□□ 0.26
DDR1-246ENST00000485023 LPCAT2Q7L5N7 544 aa16.65■□□□□ 0.26
DDR1-246ENST00000485023 SETD3Q86TU7 594 aaPredicted RBP16.65■□□□□ 0.26
DDR1-246ENST00000485023 ARFGAP1Q8N6T3 406 aa16.65■□□□□ 0.26
DDR1-246ENST00000485023 PPP1R9BQ96SB3 815 aa16.65■□□□□ 0.26
DDR1-246ENST00000485023 CHP1Q99653 195 aa16.65■□□□□ 0.26
DDR1-246ENST00000485023 NUP85Q9BW27 656 aa16.65■□□□□ 0.26
DDR1-246ENST00000485023 PACSIN1Q9BY11 444 aa16.65■□□□□ 0.26
DDR1-246ENST00000485023 ATP13A1Q9HD20 1204 aa16.65■□□□□ 0.26
DDR1-246ENST00000485023 PPARGC1AQ9UBK2 798 aaKnown RBP16.65■□□□□ 0.26
DDR1-246ENST00000485023 ZNF212Q9UDV6 495 aa16.65■□□□□ 0.26
DDR1-246ENST00000485023 SUN2Q9UH99 717 aa16.65■□□□□ 0.26
DDR1-246ENST00000485023 VPS51Q9UID3 782 aa16.65■□□□□ 0.26
DDR1-246ENST00000485023 AP4E1Q9UPM8 1137 aa16.65■□□□□ 0.26
DDR1-246ENST00000485023 NEU3Q9UQ49 428 aa16.65■□□□□ 0.26
DDR1-246ENST00000485023 EDDM13A0A1B0GTR0 161 aa16.64■□□□□ 0.25
DDR1-246ENST00000485023 AKR1B15C9JRZ8 316 aaPredicted RBP16.64■□□□□ 0.25
DDR1-246ENST00000485023 CBX4O00257 560 aa16.64■□□□□ 0.25
DDR1-246ENST00000485023 RNF8O76064 485 aa16.64■□□□□ 0.25
DDR1-246ENST00000485023 RHOQP17081 205 aa16.64■□□□□ 0.25
DDR1-246ENST00000485023 EPHB2P29323 1055 aa16.64■□□□□ 0.25
DDR1-246ENST00000485023 MIPP30301 263 aa16.64■□□□□ 0.25
DDR1-246ENST00000485023 MPLP40238 635 aa16.64■□□□□ 0.25
DDR1-246ENST00000485023 PTGER3P43115 390 aa16.64■□□□□ 0.25
DDR1-246ENST00000485023 TPMTP51580 245 aa16.64■□□□□ 0.25
DDR1-246ENST00000485023 ZNF75DP51815 510 aa16.64■□□□□ 0.25
DDR1-246ENST00000485023 GALCP54803 685 aa16.64■□□□□ 0.25
DDR1-246ENST00000485023 RPS14P62263 151 aaKnown RBP16.64■□□□□ 0.25
DDR1-246ENST00000485023 NRG1Q02297 640 aaPredicted RBP16.64■□□□□ 0.25
DDR1-246ENST00000485023 TBX2Q13207 712 aaPredicted RBP16.64■□□□□ 0.25
DDR1-246ENST00000485023 CNGA4Q8IV77 575 aa16.64■□□□□ 0.25
DDR1-246ENST00000485023 STK40Q8N2I9 435 aa16.64■□□□□ 0.25
DDR1-246ENST00000485023 DCAF4L2Q8NA75 395 aa16.64■□□□□ 0.25
DDR1-246ENST00000485023 TOE1Q96GM8 510 aaKnown RBP16.64■□□□□ 0.25
DDR1-246ENST00000485023 EPAS1Q99814 870 aa16.64■□□□□ 0.25
DDR1-246ENST00000485023 SNRNP25Q9BV90 132 aaKnown RBP16.64■□□□□ 0.25
DDR1-246ENST00000485023 C2orf49Q9BVC5 232 aaPredicted RBP16.64■□□□□ 0.25
DDR1-246ENST00000485023 DHX35Q9H5Z1 703 aaKnown RBP16.64■□□□□ 0.25
DDR1-246ENST00000485023 SPTLC3Q9NUV7 552 aa16.64■□□□□ 0.25
DDR1-246ENST00000485023 ANAPC7Q9UJX3 599 aa16.64■□□□□ 0.25
DDR1-246ENST00000485023 NENFQ9UMX5 172 aa16.64■□□□□ 0.25
DDR1-246ENST00000485023 CKAP5Q14008 2032 aa16.63■□□□□ 0.25
DDR1-246ENST00000485023 K7ERQ8 282 aa16.63■□□□□ 0.25
DDR1-246ENST00000485023 PRPSAP2O60256 369 aa16.63■□□□□ 0.25
DDR1-246ENST00000485023 NDUFS2O75306 463 aa16.63■□□□□ 0.25
DDR1-246ENST00000485023 LRCH4O75427 683 aa16.63■□□□□ 0.25
DDR1-246ENST00000485023 MT-CO1P00395 513 aa16.63■□□□□ 0.25
DDR1-246ENST00000485023 DNTTP04053 509 aa16.63■□□□□ 0.25
DDR1-246ENST00000485023 CYP1A2P05177 515 aa16.63■□□□□ 0.25
DDR1-246ENST00000485023 TCF4P15884 667 aa16.63■□□□□ 0.25
DDR1-246ENST00000485023 CD6P30203 668 aa16.63■□□□□ 0.25
DDR1-246ENST00000485023 L1CAMP32004 1257 aa16.63■□□□□ 0.25
DDR1-246ENST00000485023 ACVRL1P37023 503 aa16.63■□□□□ 0.25
DDR1-246ENST00000485023 PSMD8P48556 350 aa16.63■□□□□ 0.25
DDR1-246ENST00000485023 KRT83P78385 493 aa16.63■□□□□ 0.25
DDR1-246ENST00000485023 GNA12Q03113 381 aa16.63■□□□□ 0.25
DDR1-246ENST00000485023 ARID5BQ14865 1188 aa16.63■□□□□ 0.25
DDR1-246ENST00000485023 SF3A2Q15428 464 aaKnown RBP16.63■□□□□ 0.25
DDR1-246ENST00000485023 SLC18A3Q16572 532 aa16.63■□□□□ 0.25
DDR1-246ENST00000485023 C9orf64Q5T6V5 341 aa16.63■□□□□ 0.25
DDR1-246ENST00000485023 ZNF776Q68DI1 518 aaPredicted RBP16.63■□□□□ 0.25
DDR1-246ENST00000485023 IL31Q6EBC2 164 aa16.63■□□□□ 0.25
DDR1-246ENST00000485023 TCEAL6Q6IPX3 200 aa16.63■□□□□ 0.25
DDR1-246ENST00000485023 SLC36A4Q6YBV0 504 aa16.63■□□□□ 0.25
DDR1-246ENST00000485023 Q6ZVU0 165 aa16.63■□□□□ 0.25
DDR1-246ENST00000485023 CYP2U1Q7Z449 544 aa16.63■□□□□ 0.25
DDR1-246ENST00000485023 NLRP14Q86W24 1093 aa16.63■□□□□ 0.25
DDR1-246ENST00000485023 ZNF354CQ86Y25 554 aa16.63■□□□□ 0.25
DDR1-246ENST00000485023 MMAAQ8IVH4 418 aaKnown RBP16.63■□□□□ 0.25
DDR1-246ENST00000485023 ATP11CQ8NB49 1132 aa16.63■□□□□ 0.25
DDR1-246ENST00000485023 KDM1BQ8NB78 822 aa16.63■□□□□ 0.25
DDR1-246ENST00000485023 GANCQ8TET4 914 aa16.63■□□□□ 0.25
DDR1-246ENST00000485023 FNIP1Q8TF40 1166 aa16.63■□□□□ 0.25
DDR1-246ENST00000485023 PIGKQ92643 395 aa16.63■□□□□ 0.25
DDR1-246ENST00000485023 TCEAL3Q969E4 200 aa16.63■□□□□ 0.25
DDR1-246ENST00000485023 LOXL4Q96JB6 756 aa16.63■□□□□ 0.25
DDR1-246ENST00000485023 GPR174Q9BXC1 333 aa16.63■□□□□ 0.25
DDR1-246ENST00000485023 NHEJ1Q9H9Q4 299 aaPredicted RBP16.63■□□□□ 0.25
DDR1-246ENST00000485023 SEMA4GQ9NTN9 838 aa16.63■□□□□ 0.25
DDR1-246ENST00000485023 TMEM248Q9NWD8 314 aa16.63■□□□□ 0.25
DDR1-246ENST00000485023 USP36Q9P275 1121 aaKnown RBP16.63■□□□□ 0.25
DDR1-246ENST00000485023 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.63■□□□□ 0.25
DDR1-246ENST00000485023 FRYLO94915 3013 aa16.62■□□□□ 0.25
DDR1-246ENST00000485023 ILVBLA1L0T0 632 aa16.62■□□□□ 0.25
DDR1-246ENST00000485023 SRCP12931 536 aa16.62■□□□□ 0.25
DDR1-246ENST00000485023 MAPKAPK2P49137 400 aa16.62■□□□□ 0.25
DDR1-246ENST00000485023 AIF1P55008 147 aa16.62■□□□□ 0.25
DDR1-246ENST00000485023 TPI1P60174 286 aa16.62■□□□□ 0.25
DDR1-246ENST00000485023 MAPK8IP2Q13387 824 aaPredicted RBP16.62■□□□□ 0.25
DDR1-246ENST00000485023 DLG2Q15700 870 aa16.62■□□□□ 0.25
DDR1-246ENST00000485023 SMTNL2Q2TAL5 461 aa16.62■□□□□ 0.25
DDR1-246ENST00000485023 PPP6R3Q5H9R7 873 aaPredicted RBP16.62■□□□□ 0.25
DDR1-246ENST00000485023 KCNT1Q5JUK3 1230 aa16.62■□□□□ 0.25
DDR1-246ENST00000485023 LYSMD4Q5XG99 296 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms