RNA–Protein interactions for RNA: ENST00000484275.1

SCAF11-207, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-207ENST00000484275 SRRM3A6NNA2 597 aaPredicted RBP4.76□□□□□ -1.65
SCAF11-207ENST00000484275 BTBD18B2RXH4 712 aa4.76□□□□□ -1.65
SCAF11-207ENST00000484275 KIF3BO15066 747 aa4.76□□□□□ -1.65
SCAF11-207ENST00000484275 GLUD1P00367 558 aa4.76□□□□□ -1.65
SCAF11-207ENST00000484275 ITGB8P26012 769 aa4.76□□□□□ -1.65
SCAF11-207ENST00000484275 GLUD2P49448 558 aa4.76□□□□□ -1.65
SCAF11-207ENST00000484275 TMPRSS3P57727 454 aa4.76□□□□□ -1.65
SCAF11-207ENST00000484275 ARL6IP4Q66PJ3 421 aaKnown RBP4.76□□□□□ -1.65
SCAF11-207ENST00000484275 AAGABQ6PD74 315 aa4.76□□□□□ -1.65
SCAF11-207ENST00000484275 DPP9Q86TI2 863 aa4.76□□□□□ -1.65
SCAF11-207ENST00000484275 CLIP4Q8N3C7 705 aa4.76□□□□□ -1.65
SCAF11-207ENST00000484275 LRRC57Q8N9N7 239 aa4.76□□□□□ -1.65
SCAF11-207ENST00000484275 SORBS1Q9BX66 1292 aaKnown RBP4.76□□□□□ -1.65
SCAF11-207ENST00000484275 CATSPERBQ9H7T0 1116 aa4.76□□□□□ -1.65
SCAF11-207ENST00000484275 LOC105371045A0A1W2PR82 267 aa4.75□□□□□ -1.65
SCAF11-207ENST00000484275 TCRBV7S3A2A0A539 114 aa4.75□□□□□ -1.65
SCAF11-207ENST00000484275 STMND1H3BQB6 276 aa4.75□□□□□ -1.65
SCAF11-207ENST00000484275 PIP5K1BO14986 540 aa4.75□□□□□ -1.65
SCAF11-207ENST00000484275 LIASO43766 372 aa4.75□□□□□ -1.65
SCAF11-207ENST00000484275 PRSS2P07478 247 aa4.75□□□□□ -1.65
SCAF11-207ENST00000484275 FCGR1AP12314 374 aa4.75□□□□□ -1.65
SCAF11-207ENST00000484275 NPPBP16860 134 aa4.75□□□□□ -1.65
SCAF11-207ENST00000484275 KLRC2P26717 231 aa4.75□□□□□ -1.65
SCAF11-207ENST00000484275 STAT1P42224 750 aa4.75□□□□□ -1.65
SCAF11-207ENST00000484275 TM4SF4P48230 202 aa4.75□□□□□ -1.65
SCAF11-207ENST00000484275 RBM6P78332 1123 aaKnown RBP4.75□□□□□ -1.65
SCAF11-207ENST00000484275 COASYQ13057 564 aa4.75□□□□□ -1.65
SCAF11-207ENST00000484275 TRAF3Q13114 568 aa4.75□□□□□ -1.65
SCAF11-207ENST00000484275 KRTAP24-1Q3LI83 254 aa4.75□□□□□ -1.65
SCAF11-207ENST00000484275 RINT1Q6NUQ1 792 aa4.75□□□□□ -1.65
SCAF11-207ENST00000484275 CAMK1DQ8IU85 385 aa4.75□□□□□ -1.65
SCAF11-207ENST00000484275 OR2C3Q8N628 320 aa4.75□□□□□ -1.65
SCAF11-207ENST00000484275 TM7SF3Q9NS93 570 aa4.75□□□□□ -1.65
SCAF11-207ENST00000484275 ARL15Q9NXU5 204 aa4.75□□□□□ -1.65
SCAF11-207ENST00000484275 LZTS1Q9Y250 596 aa4.75□□□□□ -1.65
SCAF11-207ENST00000484275 PKP3Q9Y446 797 aa4.75□□□□□ -1.65
SCAF11-207ENST00000484275 PCDHGB2Q9Y5G2 931 aa4.75□□□□□ -1.65
SCAF11-207ENST00000484275 RAI2Q9Y5P3 530 aa4.75□□□□□ -1.65
SCAF11-207ENST00000484275 TBC1D3DA0A087WVF3 549 aa4.74□□□□□ -1.65
SCAF11-207ENST00000484275 TBC1D3IA0A087WXS9 549 aa4.74□□□□□ -1.65
SCAF11-207ENST00000484275 TBC1D3EA0A087X179 549 aa4.74□□□□□ -1.65
SCAF11-207ENST00000484275 TBC1D3KA0A087X1G2 549 aa4.74□□□□□ -1.65
SCAF11-207ENST00000484275 TBC1D3BA6NDS4 549 aa4.74□□□□□ -1.65
SCAF11-207ENST00000484275 TBC1D3FA6NER0 549 aaPredicted RBP4.74□□□□□ -1.65
SCAF11-207ENST00000484275 SLC38A8A6NNN8 435 aa4.74□□□□□ -1.65
SCAF11-207ENST00000484275 TBC1D3LB9A6J9 549 aa4.74□□□□□ -1.65
SCAF11-207ENST00000484275 RASA4BC9J798 803 aa4.74□□□□□ -1.65
SCAF11-207ENST00000484275 HNRNPDLO14979 420 aaKnown RBP4.74□□□□□ -1.65
SCAF11-207ENST00000484275 RASA4O43374 803 aa4.74□□□□□ -1.65
SCAF11-207ENST00000484275 DNPH1O43598 174 aa4.74□□□□□ -1.65
SCAF11-207ENST00000484275 PLA2G6O60733 806 aa4.74□□□□□ -1.65
SCAF11-207ENST00000484275 TBC1D3HP0C7X1 549 aa4.74□□□□□ -1.65
SCAF11-207ENST00000484275 TRIM27P14373 513 aa4.74□□□□□ -1.65
SCAF11-207ENST00000484275 AKT1P31749 480 aa4.74□□□□□ -1.65
SCAF11-207ENST00000484275 PPP3CCP48454 512 aa4.74□□□□□ -1.65
SCAF11-207ENST00000484275 ALDH18A1P54886 795 aaKnown RBP4.74□□□□□ -1.65
SCAF11-207ENST00000484275 EEF1A2Q05639 463 aaKnown RBP4.74□□□□□ -1.65
SCAF11-207ENST00000484275 DSC1Q08554 894 aa4.74□□□□□ -1.65
SCAF11-207ENST00000484275 TDRD12Q587J7 1177 aaKnown RBP4.74□□□□□ -1.65
SCAF11-207ENST00000484275 FSCBQ5H9T9 825 aa4.74□□□□□ -1.65
SCAF11-207ENST00000484275 IZUMO3Q5VZ72 239 aa4.74□□□□□ -1.65
SCAF11-207ENST00000484275 TBC1D3GQ6DHY5 549 aa4.74□□□□□ -1.65
SCAF11-207ENST00000484275 TBC1D3CQ6IPX1 549 aa4.74□□□□□ -1.65
SCAF11-207ENST00000484275 C8orf82Q6P1X6 216 aaPredicted RBP4.74□□□□□ -1.65
SCAF11-207ENST00000484275 SLC30A9Q6PML9 568 aa4.74□□□□□ -1.65
SCAF11-207ENST00000484275 KIAA1324Q6UXG2 1013 aaKnown RBP4.74□□□□□ -1.65
SCAF11-207ENST00000484275 TMEM200AQ86VY9 491 aa4.74□□□□□ -1.65
SCAF11-207ENST00000484275 TBC1D3Q8IZP1 549 aaPredicted RBP4.74□□□□□ -1.65
SCAF11-207ENST00000484275 NEXN-AS1Q8NBZ9 246 aa4.74□□□□□ -1.65
SCAF11-207ENST00000484275 WDR60Q8WVS4 1066 aa4.74□□□□□ -1.65
SCAF11-207ENST00000484275 KLHL31Q9H511 634 aa4.74□□□□□ -1.65
SCAF11-207ENST00000484275 KCNG2Q9UJ96 466 aa4.74□□□□□ -1.65
SCAF11-207ENST00000484275 SLC4A4Q9Y6R1 1079 aa4.74□□□□□ -1.65
SCAF11-207ENST00000484275 MS4A18H0YCH9 400 aa4.73□□□□□ -1.65
SCAF11-207ENST00000484275 LDB2O43679 373 aa4.73□□□□□ -1.65
SCAF11-207ENST00000484275 LDB3O75112 727 aa4.73□□□□□ -1.65
SCAF11-207ENST00000484275 ZNF284Q2VY69 593 aa4.73□□□□□ -1.65
SCAF11-207ENST00000484275 SPSB3Q6PJ21 355 aa4.73□□□□□ -1.65
SCAF11-207ENST00000484275 CREB3L2Q70SY1 520 aa4.73□□□□□ -1.65
SCAF11-207ENST00000484275 BICD2Q8TD16 824 aa4.73□□□□□ -1.65
SCAF11-207ENST00000484275 KIAA1191Q96A73 305 aa4.73□□□□□ -1.65
SCAF11-207ENST00000484275 HIPK3Q9H422 1215 aa4.73□□□□□ -1.65
SCAF11-207ENST00000484275 ACTR5Q9H9F9 607 aaPredicted RBP4.73□□□□□ -1.65
SCAF11-207ENST00000484275 ZDHHC7Q9NXF8 308 aa4.73□□□□□ -1.65
SCAF11-207ENST00000484275 SLC39A10Q9ULF5 831 aa4.73□□□□□ -1.65
SCAF11-207ENST00000484275 AGAP5A6NIR3 686 aa4.72□□□□□ -1.65
SCAF11-207ENST00000484275 PRSS47A8MTI9 375 aa4.72□□□□□ -1.65
SCAF11-207ENST00000484275 GNLYP22749 145 aa4.72□□□□□ -1.65
SCAF11-207ENST00000484275 THPOP40225 353 aa4.72□□□□□ -1.65
SCAF11-207ENST00000484275 RGS19P49795 217 aa4.72□□□□□ -1.65
SCAF11-207ENST00000484275 SEC61A1P61619 476 aaKnown RBP4.72□□□□□ -1.65
SCAF11-207ENST00000484275 RNASELQ05823 741 aaKnown RBP4.72□□□□□ -1.65
SCAF11-207ENST00000484275 GRSF1Q12849 480 aaKnown RBP eCLIP4.72□□□□□ -1.65
SCAF11-207ENST00000484275 SF3A3Q12874 501 aaKnown RBP eCLIP4.72□□□□□ -1.65
SCAF11-207ENST00000484275 LONRF1Q17RB8 773 aa4.72□□□□□ -1.65
SCAF11-207ENST00000484275 PLK5Q496M5 336 aa4.72□□□□□ -1.65
SCAF11-207ENST00000484275 ANKS1BQ7Z6G8 1248 aa4.72□□□□□ -1.65
SCAF11-207ENST00000484275 IGFN1Q86VF2 1251 aa4.72□□□□□ -1.65
SCAF11-207ENST00000484275 FAM185AQ8N0U4 392 aa4.72□□□□□ -1.65
SCAF11-207ENST00000484275 PJA1Q8NG27 643 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms