RNA–Protein interactions for RNA: ENST00000483873.6

GTF3C4-202, Transcript of general transcription factor IIIC subunit 4, humanhuman

TSL 3 BASIC

Gene GTF3C4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4-202ENST00000483873 FAM160A2Q8N612 972 aaPredicted RBP27.19■■□□□ 1.94
GTF3C4-202ENST00000483873 CTTNBP2NLQ9P2B4 639 aa27.19■■□□□ 1.94
GTF3C4-202ENST00000483873 IMPACTQ9P2X3 320 aa27.19■■□□□ 1.94
GTF3C4-202ENST00000483873 GPR179Q6PRD1 2367 aa27.19■■□□□ 1.94
GTF3C4-202ENST00000483873 CEP192Q8TEP8 1941 aa27.18■■□□□ 1.94
GTF3C4-202ENST00000483873 PRPSAP2O60256 369 aa27.18■■□□□ 1.94
GTF3C4-202ENST00000483873 SNAP91O60641 907 aa27.18■■□□□ 1.94
GTF3C4-202ENST00000483873 BCKDHBP21953 392 aa27.18■■□□□ 1.94
GTF3C4-202ENST00000483873 ERMARDQ5T6L9 678 aa27.18■■□□□ 1.94
GTF3C4-202ENST00000483873 KIAA1324Q6UXG2 1013 aaKnown RBP27.18■■□□□ 1.94
GTF3C4-202ENST00000483873 EPAS1Q99814 870 aa27.18■■□□□ 1.94
GTF3C4-202ENST00000483873 DHX35Q9H5Z1 703 aaKnown RBP27.18■■□□□ 1.94
GTF3C4-202ENST00000483873 PRSS16Q9NQE7 514 aa27.18■■□□□ 1.94
GTF3C4-202ENST00000483873 TMEM248Q9NWD8 314 aa27.18■■□□□ 1.94
GTF3C4-202ENST00000483873 IP6K2Q9UHH9 426 aa27.18■■□□□ 1.94
GTF3C4-202ENST00000483873 DNAI1Q9UI46 699 aa27.18■■□□□ 1.94
GTF3C4-202ENST00000483873 USP18Q9UMW8 372 aa27.18■■□□□ 1.94
GTF3C4-202ENST00000483873 TMEM253P0C7T8 217 aa27.17■■□□□ 1.94
GTF3C4-202ENST00000483873 GLDCP23378 1020 aa27.17■■□□□ 1.94
GTF3C4-202ENST00000483873 IL1R2P27930 398 aa27.17■■□□□ 1.94
GTF3C4-202ENST00000483873 EPHB2P29323 1055 aa27.17■■□□□ 1.94
GTF3C4-202ENST00000483873 P2RY2P41231 377 aa27.17■■□□□ 1.94
GTF3C4-202ENST00000483873 SULT2A1Q06520 285 aa27.17■■□□□ 1.94
GTF3C4-202ENST00000483873 PIGHQ14442 188 aaPredicted RBP27.17■■□□□ 1.94
GTF3C4-202ENST00000483873 HNRNPA1L2Q32P51 320 aaKnown RBP27.17■■□□□ 1.94
GTF3C4-202ENST00000483873 MAP7D1Q3KQU3 841 aa27.17■■□□□ 1.94
GTF3C4-202ENST00000483873 CPNE8Q86YQ8 564 aa27.17■■□□□ 1.94
GTF3C4-202ENST00000483873 NIPA2Q8N8Q9 360 aa27.17■■□□□ 1.94
GTF3C4-202ENST00000483873 PPP1R9BQ96SB3 815 aa27.17■■□□□ 1.94
GTF3C4-202ENST00000483873 KCTD15Q96SI1 283 aaPredicted RBP27.17■■□□□ 1.94
GTF3C4-202ENST00000483873 SDK1Q7Z5N4 2213 aa27.17■■□□□ 1.94
GTF3C4-202ENST00000483873 ILVBLA1L0T0 632 aa27.16■■□□□ 1.94
GTF3C4-202ENST00000483873 ZBTB24O43167 697 aaPredicted RBP27.16■■□□□ 1.94
GTF3C4-202ENST00000483873 PCK1P35558 622 aa27.16■■□□□ 1.94
GTF3C4-202ENST00000483873 ACAP1Q15027 740 aa27.16■■□□□ 1.94
GTF3C4-202ENST00000483873 TMPRSS6Q8IU80 811 aa27.16■■□□□ 1.94
GTF3C4-202ENST00000483873 KDM1BQ8NB78 822 aa27.16■■□□□ 1.94
GTF3C4-202ENST00000483873 OR2T3Q8NH03 318 aa27.16■■□□□ 1.94
GTF3C4-202ENST00000483873 PRDM16Q9HAZ2 1276 aa27.16■■□□□ 1.94
GTF3C4-202ENST00000483873 OSGEPQ9NPF4 335 aa27.16■■□□□ 1.94
GTF3C4-202ENST00000483873 SUN2Q9UH99 717 aa27.16■■□□□ 1.94
GTF3C4-202ENST00000483873 VPS51Q9UID3 782 aa27.16■■□□□ 1.94
GTF3C4-202ENST00000483873 SLC25A13Q9UJS0 675 aa27.16■■□□□ 1.94
GTF3C4-202ENST00000483873 RAB23Q9ULC3 237 aa27.16■■□□□ 1.94
GTF3C4-202ENST00000483873 OTOGLQ3ZCN5 2332 aa27.16■■□□□ 1.94
GTF3C4-202ENST00000483873 MYO1FO00160 1098 aa27.16■■□□□ 1.94
GTF3C4-202ENST00000483873 SIN3BO75182 1162 aa27.16■■□□□ 1.94
GTF3C4-202ENST00000483873 VAV1P15498 845 aa27.16■■□□□ 1.94
GTF3C4-202ENST00000483873 MAPKAPK2P49137 400 aa27.16■■□□□ 1.94
GTF3C4-202ENST00000483873 GNA12Q03113 381 aa27.16■■□□□ 1.94
GTF3C4-202ENST00000483873 SMTNL2Q2TAL5 461 aa27.16■■□□□ 1.94
GTF3C4-202ENST00000483873 TXNRD3NBQ6F5E7 133 aa27.16■■□□□ 1.94
GTF3C4-202ENST00000483873 DCAF4L2Q8NA75 395 aa27.16■■□□□ 1.94
GTF3C4-202ENST00000483873 PANX2Q96RD6 677 aa27.16■■□□□ 1.94
GTF3C4-202ENST00000483873 SPON2Q9BUD6 331 aa27.16■■□□□ 1.94
GTF3C4-202ENST00000483873 UVRAGQ9P2Y5 699 aa27.16■■□□□ 1.94
GTF3C4-202ENST00000483873 MBD1Q9UIS9 605 aaPredicted RBP27.16■■□□□ 1.94
GTF3C4-202ENST00000483873 ACVRL1P37023 503 aa27.15■■□□□ 1.94
GTF3C4-202ENST00000483873 TPI1P60174 286 aa27.15■■□□□ 1.94
GTF3C4-202ENST00000483873 PLK5Q496M5 336 aa27.15■■□□□ 1.94
GTF3C4-202ENST00000483873 KCNT1Q5JUK3 1230 aa27.15■■□□□ 1.94
GTF3C4-202ENST00000483873 ZNF783Q6ZMS7 281 aa27.15■■□□□ 1.94
GTF3C4-202ENST00000483873 RTL3Q8N8U3 475 aaKnown RBP27.15■■□□□ 1.94
GTF3C4-202ENST00000483873 NCAPGQ9BPX3 1015 aa27.15■■□□□ 1.94
GTF3C4-202ENST00000483873 C2orf49Q9BVC5 232 aaPredicted RBP27.15■■□□□ 1.94
GTF3C4-202ENST00000483873 DUSP15Q9H1R2 295 aaPredicted RBP27.15■■□□□ 1.94
GTF3C4-202ENST00000483873 ZWILCHQ9H900 591 aa27.15■■□□□ 1.94
GTF3C4-202ENST00000483873 CYP8B1Q9UNU6 501 aa27.15■■□□□ 1.94
GTF3C4-202ENST00000483873 NUP205Q92621 2012 aa27.14■■□□□ 1.94
GTF3C4-202ENST00000483873 MT-CO1P00395 513 aa27.14■■□□□ 1.93
GTF3C4-202ENST00000483873 KRT83P78385 493 aa27.14■■□□□ 1.93
GTF3C4-202ENST00000483873 SLC25A11Q02978 314 aaKnown RBP27.14■■□□□ 1.93
GTF3C4-202ENST00000483873 C9orf64Q5T6V5 341 aa27.14■■□□□ 1.93
GTF3C4-202ENST00000483873 LINGO4Q6UY18 593 aa27.14■■□□□ 1.93
GTF3C4-202ENST00000483873 SIPA1Q96FS4 1042 aa27.14■■□□□ 1.93
GTF3C4-202ENST00000483873 SPACA7Q96KW9 195 aa27.14■■□□□ 1.93
GTF3C4-202ENST00000483873 RETREG1Q9H6L5 497 aa27.14■■□□□ 1.93
GTF3C4-202ENST00000483873 NOL6Q9H6R4 1146 aaKnown RBP27.14■■□□□ 1.93
GTF3C4-202ENST00000483873 ATP13A1Q9HD20 1204 aa27.14■■□□□ 1.93
GTF3C4-202ENST00000483873 RALGAPA1Q6GYQ0 2036 aa27.14■■□□□ 1.93
GTF3C4-202ENST00000483873 TNRC6BQ9UPQ9 1833 aaKnown RBP27.14■■□□□ 1.93
GTF3C4-202ENST00000483873 EDDM13A0A1B0GTR0 161 aa27.13■■□□□ 1.93
GTF3C4-202ENST00000483873 FECHP22830 423 aa27.13■■□□□ 1.93
GTF3C4-202ENST00000483873 NNMTP40261 264 aa27.13■■□□□ 1.93
GTF3C4-202ENST00000483873 PPP6R3Q5H9R7 873 aaPredicted RBP27.13■■□□□ 1.93
GTF3C4-202ENST00000483873 LAIR1Q6GTX8 287 aa27.13■■□□□ 1.93
GTF3C4-202ENST00000483873 DCLK2Q8N568 766 aa27.13■■□□□ 1.93
GTF3C4-202ENST00000483873 SH2D3CQ8N5H7 860 aa27.13■■□□□ 1.93
GTF3C4-202ENST00000483873 SLC35G2Q8TBE7 412 aa27.13■■□□□ 1.93
GTF3C4-202ENST00000483873 FRS2Q8WU20 508 aa27.13■■□□□ 1.93
GTF3C4-202ENST00000483873 HSPH1Q92598 858 aa27.13■■□□□ 1.93
GTF3C4-202ENST00000483873 PRCCQ92733 491 aaPredicted RBP27.13■■□□□ 1.93
GTF3C4-202ENST00000483873 PTPRN2Q92932 1015 aa27.13■■□□□ 1.93
GTF3C4-202ENST00000483873 ZC3H10Q96K80 434 aaKnown RBP27.13■■□□□ 1.93
GTF3C4-202ENST00000483873 IGHV1OR15-9A0A0B4J2B8 117 aa27.12■■□□□ 1.93
GTF3C4-202ENST00000483873 SOWAHDA6NJG2 315 aa27.12■■□□□ 1.93
GTF3C4-202ENST00000483873 K7ERQ8 282 aa27.12■■□□□ 1.93
GTF3C4-202ENST00000483873 CBX4O00257 560 aa27.12■■□□□ 1.93
GTF3C4-202ENST00000483873 EEF2KO00418 725 aaKnown RBP27.12■■□□□ 1.93
GTF3C4-202ENST00000483873 ZMPSTE24O75844 475 aa27.12■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms