RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 CLN3Q13286 438 aa11.22□□□□□ -0.61
SMARCC1-205ENST00000483847 HS1BP3Q53T59 392 aa11.22□□□□□ -0.61
SMARCC1-205ENST00000483847 SGO2Q562F6 1265 aa11.22□□□□□ -0.61
SMARCC1-205ENST00000483847 LRRK2Q5S007 2527 aa11.22□□□□□ -0.61
SMARCC1-205ENST00000483847 CCDC81Q6ZN84 652 aa11.22□□□□□ -0.61
SMARCC1-205ENST00000483847 INTS8Q75QN2 995 aaKnown RBP11.22□□□□□ -0.61
SMARCC1-205ENST00000483847 FAM186BQ8IYM0 893 aa11.22□□□□□ -0.61
SMARCC1-205ENST00000483847 SLC22A18ASQ8N1D0 253 aa11.22□□□□□ -0.61
SMARCC1-205ENST00000483847 TTC39CQ8N584 583 aa11.22□□□□□ -0.61
SMARCC1-205ENST00000483847 OR13H1Q8NG92 308 aa11.22□□□□□ -0.61
SMARCC1-205ENST00000483847 IFI44Q8TCB0 444 aa11.22□□□□□ -0.61
SMARCC1-205ENST00000483847 MAPK15Q8TD08 544 aa11.22□□□□□ -0.61
SMARCC1-205ENST00000483847 FRS2Q8WU20 508 aa11.22□□□□□ -0.61
SMARCC1-205ENST00000483847 KCTD13Q8WZ19 329 aa11.22□□□□□ -0.61
SMARCC1-205ENST00000483847 EEF2KMTQ96G04 330 aa11.22□□□□□ -0.61
SMARCC1-205ENST00000483847 SPAG5Q96R06 1193 aa11.22□□□□□ -0.61
SMARCC1-205ENST00000483847 CALN1Q9BXU9 219 aa11.22□□□□□ -0.61
SMARCC1-205ENST00000483847 FAM117AQ9C073 453 aa11.22□□□□□ -0.61
SMARCC1-205ENST00000483847 KDM4CQ9H3R0 1056 aa11.22□□□□□ -0.61
SMARCC1-205ENST00000483847 ZSCAN16Q9H4T2 348 aaPredicted RBP11.22□□□□□ -0.61
SMARCC1-205ENST00000483847 FZD3Q9NPG1 666 aa11.22□□□□□ -0.61
SMARCC1-205ENST00000483847 CNGB3Q9NQW8 809 aa11.22□□□□□ -0.61
SMARCC1-205ENST00000483847 SERTAD1Q9UHV2 236 aa11.22□□□□□ -0.61
SMARCC1-205ENST00000483847 TRAF3IP3Q9Y228 551 aa11.22□□□□□ -0.61
SMARCC1-205ENST00000483847 TYW5A2RUC4 315 aaKnown RBP11.21□□□□□ -0.61
SMARCC1-205ENST00000483847 K7ESM1 405 aa11.21□□□□□ -0.61
SMARCC1-205ENST00000483847 O00370 1275 aa11.21□□□□□ -0.61
SMARCC1-205ENST00000483847 SLC7A4O43246 635 aa11.21□□□□□ -0.61
SMARCC1-205ENST00000483847 EFSO43281 561 aa11.21□□□□□ -0.61
SMARCC1-205ENST00000483847 CALUO43852 315 aaPredicted RBP11.21□□□□□ -0.61
SMARCC1-205ENST00000483847 LZTS3O60299 673 aaPredicted RBP11.21□□□□□ -0.61
SMARCC1-205ENST00000483847 RNGTTO60942 597 aaKnown RBP11.21□□□□□ -0.61
SMARCC1-205ENST00000483847 MOCS3O95396 460 aa11.21□□□□□ -0.61
SMARCC1-205ENST00000483847 MOCS2O96007 188 aaPredicted RBP11.21□□□□□ -0.61
SMARCC1-205ENST00000483847 LTFP02788 710 aa11.21□□□□□ -0.61
SMARCC1-205ENST00000483847 FYNP06241 537 aa11.21□□□□□ -0.61
SMARCC1-205ENST00000483847 KRT13P13646 458 aa11.21□□□□□ -0.61
SMARCC1-205ENST00000483847 CD19P15391 556 aa11.21□□□□□ -0.61
SMARCC1-205ENST00000483847 RBMS1P29558 406 aaKnown RBP11.21□□□□□ -0.61
SMARCC1-205ENST00000483847 CLDN2P57739 230 aa11.21□□□□□ -0.61
SMARCC1-205ENST00000483847 LINC00303Q3SY05 128 aa11.21□□□□□ -0.61
SMARCC1-205ENST00000483847 C6orf132Q5T0Z8 1188 aa11.21□□□□□ -0.61
SMARCC1-205ENST00000483847 KRT39Q6A163 491 aa11.21□□□□□ -0.61
SMARCC1-205ENST00000483847 PMF1Q6P1K2 205 aa11.21□□□□□ -0.61
SMARCC1-205ENST00000483847 FOXR1Q6PIV2 292 aa11.21□□□□□ -0.61
SMARCC1-205ENST00000483847 CRTC1Q6UUV9 634 aa11.21□□□□□ -0.61
SMARCC1-205ENST00000483847 CIR1Q86X95 450 aaPredicted RBP11.21□□□□□ -0.61
SMARCC1-205ENST00000483847 CCDC117Q8IWD4 279 aaPredicted RBP11.21□□□□□ -0.61
SMARCC1-205ENST00000483847 LGI2Q8N0V4 545 aa11.21□□□□□ -0.61
SMARCC1-205ENST00000483847 SCML4Q8N228 414 aa11.21□□□□□ -0.61
SMARCC1-205ENST00000483847 PAGE5Q96GU1 130 aa11.21□□□□□ -0.61
SMARCC1-205ENST00000483847 RAB20Q9NX57 234 aa11.21□□□□□ -0.61
SMARCC1-205ENST00000483847 NLGN3Q9NZ94 848 aa11.21□□□□□ -0.61
SMARCC1-205ENST00000483847 HESX1Q9UBX0 185 aa11.21□□□□□ -0.61
SMARCC1-205ENST00000483847 TJP2Q9UDY2 1190 aa11.21□□□□□ -0.61
SMARCC1-205ENST00000483847 PPM1HQ9ULR3 514 aa11.21□□□□□ -0.61
SMARCC1-205ENST00000483847 ENTPD2Q9Y5L3 495 aa11.21□□□□□ -0.61
SMARCC1-205ENST00000483847 HEMK1Q9Y5R4 338 aaPredicted RBP11.21□□□□□ -0.61
SMARCC1-205ENST00000483847 BSNQ9UPA5 3926 aa11.21□□□□□ -0.62
SMARCC1-205ENST00000483847 A0A1W2PQU0 124 aa11.2□□□□□ -0.62
SMARCC1-205ENST00000483847 CDRT15L2A8MXV6 281 aa11.2□□□□□ -0.62
SMARCC1-205ENST00000483847 ACTN4O43707 911 aaKnown RBP11.2□□□□□ -0.62
SMARCC1-205ENST00000483847 YEATS4O95619 227 aa11.2□□□□□ -0.62
SMARCC1-205ENST00000483847 SETSIPP0DME0 302 aa11.2□□□□□ -0.62
SMARCC1-205ENST00000483847 ALPPL2P10696 532 aa11.2□□□□□ -0.62
SMARCC1-205ENST00000483847 PDGFRAP16234 1089 aa11.2□□□□□ -0.62
SMARCC1-205ENST00000483847 MXI1P50539 228 aa11.2□□□□□ -0.62
SMARCC1-205ENST00000483847 CDKN3Q16667 212 aa11.2□□□□□ -0.62
SMARCC1-205ENST00000483847 ZSCAN23Q3MJ62 389 aa11.2□□□□□ -0.62
SMARCC1-205ENST00000483847 ARL13BQ3SXY8 428 aa11.2□□□□□ -0.62
SMARCC1-205ENST00000483847 PIP5KL1Q5T9C9 394 aa11.2□□□□□ -0.62
SMARCC1-205ENST00000483847 RESP18Q5W5W9 173 aa11.2□□□□□ -0.62
SMARCC1-205ENST00000483847 RAP1GAP2Q684P5 730 aa11.2□□□□□ -0.62
SMARCC1-205ENST00000483847 GUSBP11Q6P575 273 aa11.2□□□□□ -0.62
SMARCC1-205ENST00000483847 FBXL13Q8NEE6 735 aa11.2□□□□□ -0.62
SMARCC1-205ENST00000483847 DQX1Q8TE96 717 aaKnown RBP11.2□□□□□ -0.62
SMARCC1-205ENST00000483847 SLC35F5Q8WV83 523 aa11.2□□□□□ -0.62
SMARCC1-205ENST00000483847 IRGQQ8WZA9 623 aa11.2□□□□□ -0.62
SMARCC1-205ENST00000483847 TFAP2BQ92481 460 aa11.2□□□□□ -0.62
SMARCC1-205ENST00000483847 ARRDC3Q96B67 414 aa11.2□□□□□ -0.62
SMARCC1-205ENST00000483847 SLC39A13Q96H72 371 aa11.2□□□□□ -0.62
SMARCC1-205ENST00000483847 FAXDC2Q96IV6 333 aa11.2□□□□□ -0.62
SMARCC1-205ENST00000483847 DDX50Q9BQ39 737 aaKnown RBP11.2□□□□□ -0.62
SMARCC1-205ENST00000483847 ZSWIM1Q9BR11 485 aa11.2□□□□□ -0.62
SMARCC1-205ENST00000483847 PCDHA7Q9UN72 937 aa11.2□□□□□ -0.62
SMARCC1-205ENST00000483847 MAPK8IP1Q9UQF2 711 aa11.2□□□□□ -0.62
SMARCC1-205ENST00000483847 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.19□□□□□ -0.62
SMARCC1-205ENST00000483847 CPED1A4D0V7 1026 aa11.19□□□□□ -0.62
SMARCC1-205ENST00000483847 RNF103O00237 685 aa11.19□□□□□ -0.62
SMARCC1-205ENST00000483847 SCAMP1O15126 338 aa11.19□□□□□ -0.62
SMARCC1-205ENST00000483847 TNFSF15O95150 251 aa11.19□□□□□ -0.62
SMARCC1-205ENST00000483847 CALCAP01258 141 aa11.19□□□□□ -0.62
SMARCC1-205ENST00000483847 ITGB6P18564 788 aa11.19□□□□□ -0.62
SMARCC1-205ENST00000483847 GTF2H1P32780 548 aa11.19□□□□□ -0.62
SMARCC1-205ENST00000483847 PSMC2P35998 433 aaKnown RBP11.19□□□□□ -0.62
SMARCC1-205ENST00000483847 NNMTP40261 264 aa11.19□□□□□ -0.62
SMARCC1-205ENST00000483847 MCCD1P59942 119 aaPredicted RBP11.19□□□□□ -0.62
SMARCC1-205ENST00000483847 ENPEPQ07075 957 aa11.19□□□□□ -0.62
SMARCC1-205ENST00000483847 SRSF6Q13247 344 aaKnown RBP11.19□□□□□ -0.62
SMARCC1-205ENST00000483847 ZNF177Q13360 481 aaPredicted RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms