RNA–Protein interactions for RNA: ENST00000483122.1

VTI1A-205, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 4

Gene VTI1A, Length 2,423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-205ENST00000483122 ZBTB49Q6ZSB9 765 aa12.05□□□□□ -0.48
VTI1A-205ENST00000483122 PCDH20Q8N6Y1 951 aaKnown RBP12.05□□□□□ -0.48
VTI1A-205ENST00000483122 PQLC3Q8N755 202 aa12.05□□□□□ -0.48
VTI1A-205ENST00000483122 MCUQ8NE86 351 aa12.05□□□□□ -0.48
VTI1A-205ENST00000483122 TAMM41Q96BW9 452 aa12.05□□□□□ -0.48
VTI1A-205ENST00000483122 PIH1D1Q9NWS0 290 aaKnown RBP12.05□□□□□ -0.48
VTI1A-205ENST00000483122 CROTQ9UKG9 612 aa12.05□□□□□ -0.48
VTI1A-205ENST00000483122 AGO2Q9UKV8 859 aaKnown RBP12.05□□□□□ -0.48
VTI1A-205ENST00000483122 AKAP10O43572 662 aa12.04□□□□□ -0.48
VTI1A-205ENST00000483122 HMGCRP04035 888 aa12.04□□□□□ -0.48
VTI1A-205ENST00000483122 MX2P20592 715 aa12.04□□□□□ -0.48
VTI1A-205ENST00000483122 TYK2P29597 1187 aa12.04□□□□□ -0.48
VTI1A-205ENST00000483122 CDH5P33151 784 aaPredicted RBP12.04□□□□□ -0.48
VTI1A-205ENST00000483122 TRAF2Q12933 501 aa12.04□□□□□ -0.48
VTI1A-205ENST00000483122 TRPC3Q13507 836 aa12.04□□□□□ -0.48
VTI1A-205ENST00000483122 SEPT6Q14141 434 aa12.04□□□□□ -0.48
VTI1A-205ENST00000483122 PTK2BQ14289 1009 aa12.04□□□□□ -0.48
VTI1A-205ENST00000483122 CYP2R1Q6VVX0 501 aa12.04□□□□□ -0.48
VTI1A-205ENST00000483122 CHSY3Q70JA7 882 aa12.04□□□□□ -0.48
VTI1A-205ENST00000483122 ARMCX6Q7L4S7 300 aa12.04□□□□□ -0.48
VTI1A-205ENST00000483122 ZC3H7AQ8IWR0 971 aaKnown RBP12.04□□□□□ -0.48
VTI1A-205ENST00000483122 PLD5Q8N7P1 536 aa12.04□□□□□ -0.48
VTI1A-205ENST00000483122 ACDQ96AP0 544 aa12.04□□□□□ -0.48
VTI1A-205ENST00000483122 RTP4Q96DX8 246 aa12.04□□□□□ -0.48
VTI1A-205ENST00000483122 TPK1Q9H3S4 243 aa12.04□□□□□ -0.48
VTI1A-205ENST00000483122 ZNF385DQ9H6B1 395 aa12.04□□□□□ -0.48
VTI1A-205ENST00000483122 EFCAB1Q9HAE3 211 aa12.04□□□□□ -0.48
VTI1A-205ENST00000483122 MTMR10Q9NXD2 777 aa12.04□□□□□ -0.48
VTI1A-205ENST00000483122 IPO11Q9UI26 975 aaKnown RBP12.04□□□□□ -0.48
VTI1A-205ENST00000483122 CNOT6Q9ULM6 557 aaKnown RBP12.04□□□□□ -0.48
VTI1A-205ENST00000483122 MRPL11Q9Y3B7 192 aaKnown RBP12.04□□□□□ -0.48
VTI1A-205ENST00000483122 TCAF2A6NFQ2 919 aa12.03□□□□□ -0.48
VTI1A-205ENST00000483122 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.03□□□□□ -0.48
VTI1A-205ENST00000483122 G3V2L1 256 aa12.03□□□□□ -0.48
VTI1A-205ENST00000483122 TIPRLO75663 272 aa12.03□□□□□ -0.48
VTI1A-205ENST00000483122 ENDOD1O94919 500 aa12.03□□□□□ -0.48
VTI1A-205ENST00000483122 ESRRBO95718 433 aa12.03□□□□□ -0.48
VTI1A-205ENST00000483122 LTFP02788 710 aa12.03□□□□□ -0.48
VTI1A-205ENST00000483122 PABPC1P11940 636 aaKnown RBP12.03□□□□□ -0.48
VTI1A-205ENST00000483122 GRIA3P42263 894 aa12.03□□□□□ -0.48
VTI1A-205ENST00000483122 PRKCQQ04759 706 aa12.03□□□□□ -0.48
VTI1A-205ENST00000483122 INSCQ1MX18 579 aa12.03□□□□□ -0.48
VTI1A-205ENST00000483122 NXNQ6DKJ4 435 aa12.03□□□□□ -0.48
VTI1A-205ENST00000483122 NEPROQ6NW34 567 aa12.03□□□□□ -0.48
VTI1A-205ENST00000483122 CASC4Q6P4E1 433 aa12.03□□□□□ -0.48
VTI1A-205ENST00000483122 GALNT18Q6P9A2 607 aa12.03□□□□□ -0.48
VTI1A-205ENST00000483122 SCARA5Q6ZMJ2 495 aa12.03□□□□□ -0.48
VTI1A-205ENST00000483122 IGFN1Q86VF2 1251 aa12.03□□□□□ -0.48
VTI1A-205ENST00000483122 ZNF420Q8TAQ5 688 aaPredicted RBP12.03□□□□□ -0.48
VTI1A-205ENST00000483122 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.03□□□□□ -0.48
VTI1A-205ENST00000483122 TRUB1Q8WWH5 349 aaKnown RBP12.03□□□□□ -0.48
VTI1A-205ENST00000483122 ASB9Q96DX5 294 aa12.03□□□□□ -0.48
VTI1A-205ENST00000483122 ZNF518BQ9C0D4 1074 aa12.03□□□□□ -0.48
VTI1A-205ENST00000483122 GBA3Q9H227 469 aa12.03□□□□□ -0.48
VTI1A-205ENST00000483122 POLR1BQ9H9Y6 1135 aa12.03□□□□□ -0.48
VTI1A-205ENST00000483122 CISHQ9NSE2 258 aa12.03□□□□□ -0.48
VTI1A-205ENST00000483122 SMOXQ9NWM0 555 aa12.03□□□□□ -0.48
VTI1A-205ENST00000483122 GPATCH2LQ9NWQ4 482 aa12.03□□□□□ -0.48
VTI1A-205ENST00000483122 PI4KBQ9UBF8 816 aa12.03□□□□□ -0.48
VTI1A-205ENST00000483122 FAM198AQ9UFP1 575 aa12.03□□□□□ -0.48
VTI1A-205ENST00000483122 SFMBT1Q9UHJ3 866 aa12.03□□□□□ -0.48
VTI1A-205ENST00000483122 C1orf232A0A0U1RR37 186 aa12.03□□□□□ -0.48
VTI1A-205ENST00000483122 SAC3D1A6NKF1 404 aa12.03□□□□□ -0.48
VTI1A-205ENST00000483122 DLGAP1O14490 977 aa12.03□□□□□ -0.48
VTI1A-205ENST00000483122 CLASP2O75122 1294 aaKnown RBP12.03□□□□□ -0.48
VTI1A-205ENST00000483122 CCNE2O96020 404 aa12.03□□□□□ -0.48
VTI1A-205ENST00000483122 JUNP05412 331 aaKnown RBP12.03□□□□□ -0.48
VTI1A-205ENST00000483122 EPHX2P34913 555 aa12.03□□□□□ -0.48
VTI1A-205ENST00000483122 MLLT10P55197 1068 aa12.03□□□□□ -0.48
VTI1A-205ENST00000483122 RHDQ02161 417 aa12.03□□□□□ -0.48
VTI1A-205ENST00000483122 RALGDSQ12967 914 aa12.03□□□□□ -0.48
VTI1A-205ENST00000483122 TRIM25Q14258 630 aaKnown RBP12.03□□□□□ -0.48
VTI1A-205ENST00000483122 STILQ15468 1287 aa12.03□□□□□ -0.48
VTI1A-205ENST00000483122 CCDC153Q494R4 210 aa12.03□□□□□ -0.48
VTI1A-205ENST00000483122 TREML2Q5T2D2 321 aa12.03□□□□□ -0.48
VTI1A-205ENST00000483122 CYP4V2Q6ZWL3 525 aaPredicted RBP12.03□□□□□ -0.48
VTI1A-205ENST00000483122 CPSF7Q8N684 471 aaKnown RBP12.03□□□□□ -0.48
VTI1A-205ENST00000483122 FNIP1Q8TF40 1166 aa12.03□□□□□ -0.48
VTI1A-205ENST00000483122 LPGAT1Q92604 370 aa12.03□□□□□ -0.48
VTI1A-205ENST00000483122 RNF157Q96PX1 679 aa12.03□□□□□ -0.48
VTI1A-205ENST00000483122 CPXM1Q96SM3 734 aa12.03□□□□□ -0.48
VTI1A-205ENST00000483122 CGRRF1Q99675 332 aa12.03□□□□□ -0.48
VTI1A-205ENST00000483122 GATA5Q9BWX5 397 aaPredicted RBP12.03□□□□□ -0.48
VTI1A-205ENST00000483122 ANKEF1Q9NU02 776 aa12.03□□□□□ -0.48
VTI1A-205ENST00000483122 VPS51Q9UID3 782 aa12.03□□□□□ -0.48
VTI1A-205ENST00000483122 LTBP3Q9NS15 1303 aa12.03□□□□□ -0.48
VTI1A-205ENST00000483122 TRIM64BA6NI03 449 aa12.02□□□□□ -0.48
VTI1A-205ENST00000483122 E7ENX8 843 aa12.02□□□□□ -0.48
VTI1A-205ENST00000483122 DYNC1LI2O43237 492 aaPredicted RBP12.02□□□□□ -0.48
VTI1A-205ENST00000483122 CLIC3O95833 236 aa12.02□□□□□ -0.48
VTI1A-205ENST00000483122 PROZP22891 400 aa12.02□□□□□ -0.48
VTI1A-205ENST00000483122 IREB2P48200 963 aaKnown RBP12.02□□□□□ -0.48
VTI1A-205ENST00000483122 PSME3P61289 254 aa12.02□□□□□ -0.48
VTI1A-205ENST00000483122 MRPS9P82933 396 aaKnown RBP12.02□□□□□ -0.48
VTI1A-205ENST00000483122 IRF9Q00978 393 aa12.02□□□□□ -0.48
VTI1A-205ENST00000483122 NFATC3Q12968 1075 aa12.02□□□□□ -0.48
VTI1A-205ENST00000483122 RFTN1Q14699 578 aaPredicted RBP12.02□□□□□ -0.48
VTI1A-205ENST00000483122 KCNJ8Q15842 424 aa12.02□□□□□ -0.48
VTI1A-205ENST00000483122 TRIM16LQ309B1 348 aa12.02□□□□□ -0.48
VTI1A-205ENST00000483122 PPP4R4Q6NUP7 873 aa12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms