RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 PCDHA13Q9Y5I0 950 aa21.45■■□□□ 1.02
SEC13-217ENST00000482647 SOWAHDA6NJG2 315 aa21.44■■□□□ 1.02
SEC13-217ENST00000482647 EEF2KO00418 725 aaKnown RBP21.44■■□□□ 1.02
SEC13-217ENST00000482647 FGF10O15520 208 aaPredicted RBP21.44■■□□□ 1.02
SEC13-217ENST00000482647 IL1R2P27930 398 aa21.44■■□□□ 1.02
SEC13-217ENST00000482647 PLA2G5P39877 138 aa21.44■■□□□ 1.02
SEC13-217ENST00000482647 ARHGAP25P42331 645 aa21.44■■□□□ 1.02
SEC13-217ENST00000482647 SSR1P43307 286 aaKnown RBP21.44■■□□□ 1.02
SEC13-217ENST00000482647 NUMBP49757 651 aa21.44■■□□□ 1.02
SEC13-217ENST00000482647 VASPP50552 380 aaPredicted RBP21.44■■□□□ 1.02
SEC13-217ENST00000482647 GNA12Q03113 381 aa21.44■■□□□ 1.02
SEC13-217ENST00000482647 CAMK2GQ13555 558 aaPredicted RBP21.44■■□□□ 1.02
SEC13-217ENST00000482647 BYSLQ13895 437 aaKnown RBP21.44■■□□□ 1.02
SEC13-217ENST00000482647 CA9Q16790 459 aa21.44■■□□□ 1.02
SEC13-217ENST00000482647 HADHQ16836 314 aaKnown RBP21.44■■□□□ 1.02
SEC13-217ENST00000482647 PPP6R3Q5H9R7 873 aaPredicted RBP21.44■■□□□ 1.02
SEC13-217ENST00000482647 KCNT1Q5JUK3 1230 aa21.44■■□□□ 1.02
SEC13-217ENST00000482647 CYP4V2Q6ZWL3 525 aaPredicted RBP21.44■■□□□ 1.02
SEC13-217ENST00000482647 RTL3Q8N8U3 475 aaKnown RBP21.44■■□□□ 1.02
SEC13-217ENST00000482647 RFFLQ8WZ73 363 aa21.44■■□□□ 1.02
SEC13-217ENST00000482647 MYO19Q96H55 970 aa21.44■■□□□ 1.02
SEC13-217ENST00000482647 EPC1Q9H2F5 836 aa21.44■■□□□ 1.02
SEC13-217ENST00000482647 ZWILCHQ9H900 591 aa21.44■■□□□ 1.02
SEC13-217ENST00000482647 DNAI1Q9UI46 699 aa21.44■■□□□ 1.02
SEC13-217ENST00000482647 DMDP11532 3685 aa21.44■■□□□ 1.02
SEC13-217ENST00000482647 DAPK3O43293 454 aa21.43■■□□□ 1.02
SEC13-217ENST00000482647 MTA2O94776 668 aa21.43■■□□□ 1.02
SEC13-217ENST00000482647 NDUFA10O95299 355 aa21.43■■□□□ 1.02
SEC13-217ENST00000482647 NDUFV2P19404 249 aa21.43■■□□□ 1.02
SEC13-217ENST00000482647 SRSF5Q13243 272 aaKnown RBP21.43■■□□□ 1.02
SEC13-217ENST00000482647 SIM2Q14190 667 aaPredicted RBP21.43■■□□□ 1.02
SEC13-217ENST00000482647 TCEAL1Q15170 157 aa21.43■■□□□ 1.02
SEC13-217ENST00000482647 HNRNPA1L2Q32P51 320 aaKnown RBP21.43■■□□□ 1.02
SEC13-217ENST00000482647 CEP68Q76N32 757 aa21.43■■□□□ 1.02
SEC13-217ENST00000482647 ZNF366Q8N895 744 aa21.43■■□□□ 1.02
SEC13-217ENST00000482647 DCAF4L2Q8NA75 395 aa21.43■■□□□ 1.02
SEC13-217ENST00000482647 OR7D4Q8NG98 312 aa21.43■■□□□ 1.02
SEC13-217ENST00000482647 OR2T3Q8NH03 318 aa21.43■■□□□ 1.02
SEC13-217ENST00000482647 TEKT4Q8WW24 435 aa21.43■■□□□ 1.02
SEC13-217ENST00000482647 MRGPRX1Q96LB2 322 aa21.43■■□□□ 1.02
SEC13-217ENST00000482647 KCTD15Q96SI1 283 aaPredicted RBP21.43■■□□□ 1.02
SEC13-217ENST00000482647 PSMB7Q99436 277 aa21.43■■□□□ 1.02
SEC13-217ENST00000482647 MAGEH1Q9H213 219 aa21.43■■□□□ 1.02
SEC13-217ENST00000482647 FBRSQ9HAH7 460 aa21.43■■□□□ 1.02
SEC13-217ENST00000482647 PRDM16Q9HAZ2 1276 aa21.43■■□□□ 1.02
SEC13-217ENST00000482647 ATP13A1Q9HD20 1204 aa21.43■■□□□ 1.02
SEC13-217ENST00000482647 PRSS16Q9NQE7 514 aa21.43■■□□□ 1.02
SEC13-217ENST00000482647 VPS51Q9UID3 782 aa21.43■■□□□ 1.02
SEC13-217ENST00000482647 TARSL2A2RTX5 802 aaKnown RBP21.42■■□□□ 1.02
SEC13-217ENST00000482647 WASH4PA8MWX3 477 aa21.42■■□□□ 1.02
SEC13-217ENST00000482647 TTC34A8MYJ7 566 aa21.42■■□□□ 1.02
SEC13-217ENST00000482647 RAMP2O60895 175 aa21.42■■□□□ 1.02
SEC13-217ENST00000482647 LMNAP02545 664 aaKnown RBP21.42■■□□□ 1.02
SEC13-217ENST00000482647 RARAP10276 462 aa21.42■■□□□ 1.02
SEC13-217ENST00000482647 TCF4P15884 667 aa21.42■■□□□ 1.02
SEC13-217ENST00000482647 MAN1A1P33908 653 aa21.42■■□□□ 1.02
SEC13-217ENST00000482647 HCAR3P49019 387 aa21.42■■□□□ 1.02
SEC13-217ENST00000482647 STK19P49842 368 aaPredicted RBP21.42■■□□□ 1.02
SEC13-217ENST00000482647 GSDMDP57764 484 aa21.42■■□□□ 1.02
SEC13-217ENST00000482647 MESDQ14696 234 aa21.42■■□□□ 1.02
SEC13-217ENST00000482647 DPYSL2Q16555 572 aa21.42■■□□□ 1.02
SEC13-217ENST00000482647 SMTNL2Q2TAL5 461 aa21.42■■□□□ 1.02
SEC13-217ENST00000482647 IL31Q6EBC2 164 aa21.42■■□□□ 1.02
SEC13-217ENST00000482647 RETSATQ6NUM9 610 aa21.42■■□□□ 1.02
SEC13-217ENST00000482647 C11orf74Q86VG3 221 aa21.42■■□□□ 1.02
SEC13-217ENST00000482647 TMPRSS6Q8IU80 811 aa21.42■■□□□ 1.02
SEC13-217ENST00000482647 HSPH1Q92598 858 aa21.42■■□□□ 1.02
SEC13-217ENST00000482647 MKRN2Q9H000 416 aaKnown RBP21.42■■□□□ 1.02
SEC13-217ENST00000482647 STAU2Q9NUL3 570 aaKnown RBP eCLIP21.42■■□□□ 1.02
SEC13-217ENST00000482647 NDFIP2Q9NV92 336 aa21.42■■□□□ 1.02
SEC13-217ENST00000482647 RAB23Q9ULC3 237 aa21.42■■□□□ 1.02
SEC13-217ENST00000482647 ZFHX2Q9C0A1 2572 aaPredicted RBP21.41■■□□□ 1.02
SEC13-217ENST00000482647 EDDM13A0A1B0GTR0 161 aa21.41■■□□□ 1.02
SEC13-217ENST00000482647 TMEM110-MUSTN1A8MSY1 372 aa21.41■■□□□ 1.02
SEC13-217ENST00000482647 CBX4O00257 560 aa21.41■■□□□ 1.02
SEC13-217ENST00000482647 SNAP91O60641 907 aa21.41■■□□□ 1.02
SEC13-217ENST00000482647 ZNF217O75362 1048 aa21.41■■□□□ 1.02
SEC13-217ENST00000482647 SLC25A11Q02978 314 aaKnown RBP21.41■■□□□ 1.02
SEC13-217ENST00000482647 SLC20A2Q08357 652 aa21.41■■□□□ 1.02
SEC13-217ENST00000482647 POLD3Q15054 466 aaPredicted RBP21.41■■□□□ 1.02
SEC13-217ENST00000482647 ACCSLQ4AC99 568 aa21.41■■□□□ 1.02
SEC13-217ENST00000482647 KIAA1324Q6UXG2 1013 aaKnown RBP21.41■■□□□ 1.02
SEC13-217ENST00000482647 PRR23BQ6ZRT6 265 aa21.41■■□□□ 1.02
SEC13-217ENST00000482647 RFX8Q6ZV50 586 aa21.41■■□□□ 1.02
SEC13-217ENST00000482647 ATP11CQ8NB49 1132 aa21.41■■□□□ 1.02
SEC13-217ENST00000482647 PRCCQ92733 491 aaPredicted RBP21.41■■□□□ 1.02
SEC13-217ENST00000482647 ARHGEF2Q92974 986 aaKnown RBP21.41■■□□□ 1.02
SEC13-217ENST00000482647 SIPA1Q96FS4 1042 aa21.41■■□□□ 1.02
SEC13-217ENST00000482647 SPACA7Q96KW9 195 aa21.41■■□□□ 1.02
SEC13-217ENST00000482647 ACE2Q9BYF1 805 aaPredicted RBP21.41■■□□□ 1.02
SEC13-217ENST00000482647 SLC6A17Q9H1V8 727 aa21.41■■□□□ 1.02
SEC13-217ENST00000482647 HPCAL4Q9UM19 191 aa21.41■■□□□ 1.02
SEC13-217ENST00000482647 HS3ST2Q9Y278 367 aa21.41■■□□□ 1.02
SEC13-217ENST00000482647 WDR87Q6ZQQ6 2873 aa21.41■■□□□ 1.02
SEC13-217ENST00000482647 GOLGA6L3A6NEY3 463 aa21.4■■□□□ 1.02
SEC13-217ENST00000482647 H3BRJ5 948 aa21.4■■□□□ 1.02
SEC13-217ENST00000482647 ATP9BO43861 1147 aa21.4■■□□□ 1.02
SEC13-217ENST00000482647 GOT1P17174 413 aa21.4■■□□□ 1.02
SEC13-217ENST00000482647 ACVRL1P37023 503 aa21.4■■□□□ 1.02
SEC13-217ENST00000482647 ARL4AP40617 200 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms