RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 JCHAINP01591 159 aa14.78□□□□□ -0.04
CHD3-211ENST00000481999 GMPRP36959 345 aa14.78□□□□□ -0.04
CHD3-211ENST00000481999 PSMD5Q16401 504 aa14.78□□□□□ -0.04
CHD3-211ENST00000481999 PIK3R6Q5UE93 754 aa14.78□□□□□ -0.04
CHD3-211ENST00000481999 CIR1Q86X95 450 aaPredicted RBP14.78□□□□□ -0.04
CHD3-211ENST00000481999 NSMCE1Q8WV22 266 aa14.78□□□□□ -0.04
CHD3-211ENST00000481999 ARNTL2Q8WYA1 636 aa14.78□□□□□ -0.04
CHD3-211ENST00000481999 VN1R3Q9BXE9 311 aa14.78□□□□□ -0.04
CHD3-211ENST00000481999 SMOC2Q9H3U7 446 aa14.78□□□□□ -0.04
CHD3-211ENST00000481999 SYBUQ9NX95 663 aa14.78□□□□□ -0.04
CHD3-211ENST00000481999 PCDHB5Q9Y5E4 795 aa14.78□□□□□ -0.04
CHD3-211ENST00000481999 HS3ST4Q9Y661 456 aa14.78□□□□□ -0.04
CHD3-211ENST00000481999 COL4A4P53420 1690 aaPredicted RBP14.78□□□□□ -0.04
CHD3-211ENST00000481999 FNDC1Q4ZHG4 1894 aaPredicted RBP14.78□□□□□ -0.04
CHD3-211ENST00000481999 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.77□□□□□ -0.04
CHD3-211ENST00000481999 HACD1B0YJ81 288 aa14.77□□□□□ -0.04
CHD3-211ENST00000481999 PITPNM1O00562 1244 aa14.77□□□□□ -0.04
CHD3-211ENST00000481999 TRAFD1O14545 582 aaPredicted RBP14.77□□□□□ -0.04
CHD3-211ENST00000481999 ITGB8P26012 769 aa14.77□□□□□ -0.04
CHD3-211ENST00000481999 PPIDQ08752 370 aaKnown RBP14.77□□□□□ -0.04
CHD3-211ENST00000481999 TAF10Q12962 218 aa14.77□□□□□ -0.04
CHD3-211ENST00000481999 MRPL58Q14197 206 aaKnown RBP14.77□□□□□ -0.04
CHD3-211ENST00000481999 KDELC2Q7Z4H8 507 aa14.77□□□□□ -0.04
CHD3-211ENST00000481999 NPAS4Q8IUM7 802 aa14.77□□□□□ -0.04
CHD3-211ENST00000481999 DCP1BQ8IZD4 617 aaKnown RBP14.77□□□□□ -0.04
CHD3-211ENST00000481999 CNTD1Q8N815 330 aa14.77□□□□□ -0.04
CHD3-211ENST00000481999 SPATA22Q8NHS9 363 aa14.77□□□□□ -0.04
CHD3-211ENST00000481999 MYEOVQ96EZ4 313 aa14.77□□□□□ -0.04
CHD3-211ENST00000481999 APOPT1Q96IL0 206 aa14.77□□□□□ -0.04
CHD3-211ENST00000481999 MCOLN1Q9GZU1 580 aa14.77□□□□□ -0.04
CHD3-211ENST00000481999 SAR1AQ9NR31 198 aa14.77□□□□□ -0.04
CHD3-211ENST00000481999 ARHGEF38Q9NXL2 777 aa14.77□□□□□ -0.04
CHD3-211ENST00000481999 ZFP69BQ9UJL9 534 aa14.77□□□□□ -0.04
CHD3-211ENST00000481999 MT-CYBP00156 380 aaPredicted RBP14.77□□□□□ -0.05
CHD3-211ENST00000481999 T-ENOLP0DO92 83 aa14.77□□□□□ -0.05
CHD3-211ENST00000481999 TPH1P17752 444 aa14.77□□□□□ -0.05
CHD3-211ENST00000481999 NFKB1P19838 968 aa14.77□□□□□ -0.05
CHD3-211ENST00000481999 TPSB2P20231 275 aa14.77□□□□□ -0.05
CHD3-211ENST00000481999 FGFR3P22607 806 aa14.77□□□□□ -0.05
CHD3-211ENST00000481999 CCR1P32246 355 aa14.77□□□□□ -0.05
CHD3-211ENST00000481999 TPSAB1Q15661 275 aa14.77□□□□□ -0.05
CHD3-211ENST00000481999 ZNF280DQ6N043 979 aa14.77□□□□□ -0.05
CHD3-211ENST00000481999 CHSY1Q86X52 802 aa14.77□□□□□ -0.05
CHD3-211ENST00000481999 ZSCAN18Q8TBC5 510 aaPredicted RBP14.77□□□□□ -0.05
CHD3-211ENST00000481999 EBNA1BP2Q99848 306 aaKnown RBP14.77□□□□□ -0.05
CHD3-211ENST00000481999 MLPHQ9BV36 600 aaPredicted RBP14.77□□□□□ -0.05
CHD3-211ENST00000481999 TRIM55Q9BYV6 548 aa14.77□□□□□ -0.05
CHD3-211ENST00000481999 CCSER2Q9H7U1 834 aa14.77□□□□□ -0.05
CHD3-211ENST00000481999 ATP11BQ9Y2G3 1177 aa14.77□□□□□ -0.05
CHD3-211ENST00000481999 SF3B1O75533 1304 aaKnown RBP eCLIP14.77□□□□□ -0.05
CHD3-211ENST00000481999 SYN3O14994 580 aa14.76□□□□□ -0.05
CHD3-211ENST00000481999 OPHN1O60890 802 aa14.76□□□□□ -0.05
CHD3-211ENST00000481999 CSPG5O95196 566 aa14.76□□□□□ -0.05
CHD3-211ENST00000481999 DHRS4L1P0CG22 281 aa14.76□□□□□ -0.05
CHD3-211ENST00000481999 ATF6P18850 670 aa14.76□□□□□ -0.05
CHD3-211ENST00000481999 SLC18A2Q05940 514 aa14.76□□□□□ -0.05
CHD3-211ENST00000481999 TAF1BQ53T94 588 aaPredicted RBP14.76□□□□□ -0.05
CHD3-211ENST00000481999 COL13A1Q5TAT6 717 aaPredicted RBP14.76□□□□□ -0.05
CHD3-211ENST00000481999 ZNF449Q6P9G9 518 aa14.76□□□□□ -0.05
CHD3-211ENST00000481999 SLC39A5Q6ZMH5 540 aa14.76□□□□□ -0.05
CHD3-211ENST00000481999 CDHR3Q6ZTQ4 885 aa14.76□□□□□ -0.05
CHD3-211ENST00000481999 ARHGAP12Q8IWW6 846 aa14.76□□□□□ -0.05
CHD3-211ENST00000481999 MCUQ8NE86 351 aa14.76□□□□□ -0.05
CHD3-211ENST00000481999 FBXO32Q969P5 355 aa14.76□□□□□ -0.05
CHD3-211ENST00000481999 SLC7A6OSQ96CW6 309 aaPredicted RBP14.76□□□□□ -0.05
CHD3-211ENST00000481999 NYNRINQ9P2P1 1898 aaKnown RBP14.76□□□□□ -0.05
CHD3-211ENST00000481999 OGDHLQ9ULD0 1010 aa14.76□□□□□ -0.05
CHD3-211ENST00000481999 PSAT1Q9Y617 370 aa14.76□□□□□ -0.05
CHD3-211ENST00000481999 MYO7AQ13402 2215 aa14.76□□□□□ -0.05
CHD3-211ENST00000481999 HMX2A2RU54 273 aa14.76□□□□□ -0.05
CHD3-211ENST00000481999 SCAMP3O14828 347 aaKnown RBP14.76□□□□□ -0.05
CHD3-211ENST00000481999 CNTN5O94779 1100 aa14.76□□□□□ -0.05
CHD3-211ENST00000481999 APOEP02649 317 aa14.76□□□□□ -0.05
CHD3-211ENST00000481999 PYGBP11216 843 aa14.76□□□□□ -0.05
CHD3-211ENST00000481999 TUBP50607 506 aa14.76□□□□□ -0.05
CHD3-211ENST00000481999 NEK3P51956 506 aa14.76□□□□□ -0.05
CHD3-211ENST00000481999 AIF1P55008 147 aa14.76□□□□□ -0.05
CHD3-211ENST00000481999 GALNT2Q10471 571 aa14.76□□□□□ -0.05
CHD3-211ENST00000481999 NFE2Q16621 373 aaPredicted RBP14.76□□□□□ -0.05
CHD3-211ENST00000481999 BZW1Q7L1Q6 419 aaKnown RBP14.76□□□□□ -0.05
CHD3-211ENST00000481999 CLNKQ7Z7G1 428 aa14.76□□□□□ -0.05
CHD3-211ENST00000481999 OXNAD1Q96HP4 312 aaPredicted RBP14.76□□□□□ -0.05
CHD3-211ENST00000481999 TSSK1BQ9BXA7 367 aa14.76□□□□□ -0.05
CHD3-211ENST00000481999 SLC39A8Q9C0K1 460 aa14.76□□□□□ -0.05
CHD3-211ENST00000481999 RRN3Q9NYV6 651 aa14.76□□□□□ -0.05
CHD3-211ENST00000481999 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.76□□□□□ -0.05
CHD3-211ENST00000481999 E2F8A0AVK6 867 aa14.75□□□□□ -0.05
CHD3-211ENST00000481999 TTC24A2A3L6 582 aaPredicted RBP14.75□□□□□ -0.05
CHD3-211ENST00000481999 GOLGA8TH3BQL2 631 aa14.75□□□□□ -0.05
CHD3-211ENST00000481999 RPSAP08865 295 aaKnown RBP14.75□□□□□ -0.05
CHD3-211ENST00000481999 ETV4P43268 484 aa14.75□□□□□ -0.05
CHD3-211ENST00000481999 ABCG1P45844 678 aa14.75□□□□□ -0.05
CHD3-211ENST00000481999 ALFQ53S48 1182 aa14.75□□□□□ -0.05
CHD3-211ENST00000481999 MROH9Q5TGP6 573 aa14.75□□□□□ -0.05
CHD3-211ENST00000481999 MTDHQ86UE4 582 aaKnown RBP14.75□□□□□ -0.05
CHD3-211ENST00000481999 SLC26A11Q86WA9 606 aa14.75□□□□□ -0.05
CHD3-211ENST00000481999 AUTS2Q8WXX7 1259 aa14.75□□□□□ -0.05
CHD3-211ENST00000481999 HDAC11Q96DB2 347 aa14.75□□□□□ -0.05
CHD3-211ENST00000481999 ZNF778Q96MU6 729 aa14.75□□□□□ -0.05
CHD3-211ENST00000481999 TBC1D10AQ9BXI6 508 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms