RNA–Protein interactions for RNA: ENST00000481739.1

RXRA-202, Transcript of retinoid X receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RXRA, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-202ENST00000481739 USP15Q9Y4E8 981 aaPredicted RBP16.13■□□□□ 0.17
RXRA-202ENST00000481739 NR2E3Q9Y5X4 410 aa16.13■□□□□ 0.17
RXRA-202ENST00000481739 LAMA2P24043 3122 aaKnown RBP16.12■□□□□ 0.17
RXRA-202ENST00000481739 LCHNA4D1U4 455 aa16.12■□□□□ 0.17
RXRA-202ENST00000481739 KCNK1O00180 336 aa16.12■□□□□ 0.17
RXRA-202ENST00000481739 OAS1P00973 400 aaKnown RBP16.12■□□□□ 0.17
RXRA-202ENST00000481739 RPA3P35244 121 aaPredicted RBP16.12■□□□□ 0.17
RXRA-202ENST00000481739 TIGD7Q6NT04 549 aaPredicted RBP16.12■□□□□ 0.17
RXRA-202ENST00000481739 RWDD4Q6NW29 188 aaKnown RBP16.12■□□□□ 0.17
RXRA-202ENST00000481739 KLHDC8BQ8IXV7 354 aa16.12■□□□□ 0.17
RXRA-202ENST00000481739 KLHL23Q8NBE8 558 aa16.12■□□□□ 0.17
RXRA-202ENST00000481739 STKLD1Q8NE28 680 aa16.12■□□□□ 0.17
RXRA-202ENST00000481739 GPR152Q8TDT2 470 aa16.12■□□□□ 0.17
RXRA-202ENST00000481739 FCRL2Q96LA5 508 aaPredicted RBP16.12■□□□□ 0.17
RXRA-202ENST00000481739 TEKT5Q96M29 485 aa16.12■□□□□ 0.17
RXRA-202ENST00000481739 ELAC2Q9BQ52 826 aaKnown RBP16.12■□□□□ 0.17
RXRA-202ENST00000481739 VPS11Q9H270 941 aa16.12■□□□□ 0.17
RXRA-202ENST00000481739 ACTR5Q9H9F9 607 aaPredicted RBP16.12■□□□□ 0.17
RXRA-202ENST00000481739 FGFR1OP2Q9NVK5 253 aa16.12■□□□□ 0.17
RXRA-202ENST00000481739 PLXNA3P51805 1871 aa16.12■□□□□ 0.17
RXRA-202ENST00000481739 HAPLN1P10915 354 aaPredicted RBP16.12■□□□□ 0.17
RXRA-202ENST00000481739 ALADP13716 330 aa16.12■□□□□ 0.17
RXRA-202ENST00000481739 TAC1P20366 129 aa16.12■□□□□ 0.17
RXRA-202ENST00000481739 YWHAQP27348 245 aa16.12■□□□□ 0.17
RXRA-202ENST00000481739 CTNNB1P35222 781 aa16.12■□□□□ 0.17
RXRA-202ENST00000481739 RPL10AP62906 217 aaKnown RBP16.12■□□□□ 0.17
RXRA-202ENST00000481739 SPANXN3Q5MJ09 141 aa16.12■□□□□ 0.17
RXRA-202ENST00000481739 MARK2Q7KZI7 788 aaKnown RBP16.12■□□□□ 0.17
RXRA-202ENST00000481739 LINC00523Q86TU6 105 aa16.12■□□□□ 0.17
RXRA-202ENST00000481739 PRPF39Q86UA1 669 aaKnown RBP16.12■□□□□ 0.17
RXRA-202ENST00000481739 ATPAF2Q8N5M1 289 aa16.12■□□□□ 0.17
RXRA-202ENST00000481739 LRRC8CQ8TDW0 803 aa16.12■□□□□ 0.17
RXRA-202ENST00000481739 CLP1Q92989 425 aaKnown RBP16.12■□□□□ 0.17
RXRA-202ENST00000481739 SLC39A13Q96H72 371 aa16.12■□□□□ 0.17
RXRA-202ENST00000481739 CRISPLD1Q9H336 500 aa16.12■□□□□ 0.17
RXRA-202ENST00000481739 KDM4CQ9H3R0 1056 aa16.12■□□□□ 0.17
RXRA-202ENST00000481739 LRRC40Q9H9A6 602 aa16.12■□□□□ 0.17
RXRA-202ENST00000481739 NMUR1Q9HB89 426 aa16.12■□□□□ 0.17
RXRA-202ENST00000481739 MLXIPLQ9NP71 852 aa16.12■□□□□ 0.17
RXRA-202ENST00000481739 TLR8Q9NR97 1041 aaKnown RBP16.12■□□□□ 0.17
RXRA-202ENST00000481739 BFARQ9NZS9 450 aa16.12■□□□□ 0.17
RXRA-202ENST00000481739 STK39Q9UEW8 545 aa16.12■□□□□ 0.17
RXRA-202ENST00000481739 MAGEB16A2A368 324 aa16.11■□□□□ 0.17
RXRA-202ENST00000481739 LPXNO60711 386 aa16.11■□□□□ 0.17
RXRA-202ENST00000481739 VNN2O95498 520 aa16.11■□□□□ 0.17
RXRA-202ENST00000481739 POLBP06746 335 aa16.11■□□□□ 0.17
RXRA-202ENST00000481739 C9orf50Q5SZB4 431 aa16.11■□□□□ 0.17
RXRA-202ENST00000481739 ARMC3Q5W041 872 aa16.11■□□□□ 0.17
RXRA-202ENST00000481739 KCTD11Q693B1 232 aa16.11■□□□□ 0.17
RXRA-202ENST00000481739 NAPEPLDQ6IQ20 393 aa16.11■□□□□ 0.17
RXRA-202ENST00000481739 CASC4Q6P4E1 433 aa16.11■□□□□ 0.17
RXRA-202ENST00000481739 SPATA21Q7Z572 469 aa16.11■□□□□ 0.17
RXRA-202ENST00000481739 GBP7Q8N8V2 638 aaPredicted RBP16.11■□□□□ 0.17
RXRA-202ENST00000481739 SP7Q8TDD2 431 aaPredicted RBP16.11■□□□□ 0.17
RXRA-202ENST00000481739 DEPDC1BQ8WUY9 529 aa16.11■□□□□ 0.17
RXRA-202ENST00000481739 FATE1Q969F0 183 aa16.11■□□□□ 0.17
RXRA-202ENST00000481739 SIK2Q9H0K1 926 aa16.11■□□□□ 0.17
RXRA-202ENST00000481739 SFMBT1Q9UHJ3 866 aa16.11■□□□□ 0.17
RXRA-202ENST00000481739 STARD13Q9Y3M8 1113 aa16.11■□□□□ 0.17
RXRA-202ENST00000481739 MYO16Q9Y6X6 1858 aa16.1■□□□□ 0.17
RXRA-202ENST00000481739 CACNG3O60359 315 aa16.1■□□□□ 0.17
RXRA-202ENST00000481739 CSPG5O95196 566 aa16.1■□□□□ 0.17
RXRA-202ENST00000481739 SRGAP2BP0DMP2 458 aa16.1■□□□□ 0.17
RXRA-202ENST00000481739 GRIA1P42261 906 aa16.1■□□□□ 0.17
RXRA-202ENST00000481739 MAGEA9P43362 315 aa16.1■□□□□ 0.17
RXRA-202ENST00000481739 MAGEA10P43363 369 aaPredicted RBP16.1■□□□□ 0.17
RXRA-202ENST00000481739 NPY2RP49146 381 aa16.1■□□□□ 0.17
RXRA-202ENST00000481739 KPNA1P52294 538 aaPredicted RBP16.1■□□□□ 0.17
RXRA-202ENST00000481739 MLLT6P55198 1093 aaPredicted RBP16.1■□□□□ 0.17
RXRA-202ENST00000481739 LVRNQ6Q4G3 990 aa16.1■□□□□ 0.17
RXRA-202ENST00000481739 TIFABQ6ZNK6 161 aa16.1■□□□□ 0.17
RXRA-202ENST00000481739 SH2D5Q6ZV89 423 aa16.1■□□□□ 0.17
RXRA-202ENST00000481739 TMC7Q7Z402 723 aa16.1■□□□□ 0.17
RXRA-202ENST00000481739 CHSY1Q86X52 802 aa16.1■□□□□ 0.17
RXRA-202ENST00000481739 MPP5Q8N3R9 675 aa16.1■□□□□ 0.17
RXRA-202ENST00000481739 RTL3Q8N8U3 475 aaKnown RBP16.1■□□□□ 0.17
RXRA-202ENST00000481739 ATP6V0D2Q8N8Y2 350 aa16.1■□□□□ 0.17
RXRA-202ENST00000481739 FBXO32Q969P5 355 aa16.1■□□□□ 0.17
RXRA-202ENST00000481739 CDK5RAP1Q96SZ6 601 aaKnown RBP16.1■□□□□ 0.17
RXRA-202ENST00000481739 PAIP2Q9BPZ3 127 aaKnown RBP16.1■□□□□ 0.17
RXRA-202ENST00000481739 PITPNM3Q9BZ71 974 aa16.1■□□□□ 0.17
RXRA-202ENST00000481739 IQCGQ9H095 443 aaKnown RBP16.1■□□□□ 0.17
RXRA-202ENST00000481739 CASS4Q9NQ75 786 aa16.1■□□□□ 0.17
RXRA-202ENST00000481739 PPARGC1AQ9UBK2 798 aaKnown RBP16.1■□□□□ 0.17
RXRA-202ENST00000481739 ARL2BPQ9Y2Y0 163 aa16.1■□□□□ 0.17
RXRA-202ENST00000481739 AAR2Q9Y312 384 aaKnown RBP16.1■□□□□ 0.17
RXRA-202ENST00000481739 ARHGAP42A6NI28 874 aa16.1■□□□□ 0.17
RXRA-202ENST00000481739 TRIM49D1C9J1S8 452 aa16.1■□□□□ 0.17
RXRA-202ENST00000481739 E9PAM4 449 aa16.1■□□□□ 0.17
RXRA-202ENST00000481739 ZBTB24O43167 697 aaPredicted RBP16.1■□□□□ 0.17
RXRA-202ENST00000481739 MSI1O43347 362 aaKnown RBP16.1■□□□□ 0.17
RXRA-202ENST00000481739 LINC00271P0C7V0 271 aa16.1■□□□□ 0.17
RXRA-202ENST00000481739 MGAT1P26572 445 aa16.1■□□□□ 0.17
RXRA-202ENST00000481739 BMPR1AP36894 532 aa16.1■□□□□ 0.17
RXRA-202ENST00000481739 CCNFP41002 786 aa16.1■□□□□ 0.17
RXRA-202ENST00000481739 NEK3P51956 506 aa16.1■□□□□ 0.17
RXRA-202ENST00000481739 TBX4P57082 545 aa16.1■□□□□ 0.17
RXRA-202ENST00000481739 SESN2P58004 480 aaPredicted RBP16.1■□□□□ 0.17
RXRA-202ENST00000481739 CRYMQ14894 314 aa16.1■□□□□ 0.17
RXRA-202ENST00000481739 TRIP4Q15650 581 aaPredicted RBP16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms