RNA–Protein interactions for RNA: ENST00000480961.1

CTSA-206, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 513 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-206ENST00000480961 ZNF528Q3MIS6 628 aa20.87■□□□□ 0.93
CTSA-206ENST00000480961 LINGO4Q6UY18 593 aa20.87■□□□□ 0.93
CTSA-206ENST00000480961 PSTKQ8IV42 348 aaKnown RBP20.87■□□□□ 0.93
CTSA-206ENST00000480961 PGBD3Q8N328 593 aa20.87■□□□□ 0.93
CTSA-206ENST00000480961 CAMKK1Q8N5S9 505 aa20.87■□□□□ 0.93
CTSA-206ENST00000480961 RTL3Q8N8U3 475 aaKnown RBP20.87■□□□□ 0.93
CTSA-206ENST00000480961 NETO2Q8NC67 525 aa20.87■□□□□ 0.93
CTSA-206ENST00000480961 ATRIPQ8WXE1 791 aa20.87■□□□□ 0.93
CTSA-206ENST00000480961 MYO19Q96H55 970 aa20.87■□□□□ 0.93
CTSA-206ENST00000480961 LACRTQ9GZZ8 138 aa20.87■□□□□ 0.93
CTSA-206ENST00000480961 GOLPH3Q9H4A6 298 aa20.87■□□□□ 0.93
CTSA-206ENST00000480961 CD248Q9HCU0 757 aa20.87■□□□□ 0.93
CTSA-206ENST00000480961 ZSCAN32Q9NX65 697 aa20.87■□□□□ 0.93
CTSA-206ENST00000480961 BCCIPQ9P287 314 aaKnown RBP eCLIP20.87■□□□□ 0.93
CTSA-206ENST00000480961 INVSQ9Y283 1065 aa20.87■□□□□ 0.93
CTSA-206ENST00000480961 DMDP11532 3685 aa20.86■□□□□ 0.93
CTSA-206ENST00000480961 NPC1O15118 1278 aa20.86■□□□□ 0.93
CTSA-206ENST00000480961 BUB1O43683 1085 aa20.86■□□□□ 0.93
CTSA-206ENST00000480961 SYNCRIPO60506 623 aaKnown RBP20.86■□□□□ 0.93
CTSA-206ENST00000480961 BUB1BO60566 1050 aaPredicted RBP20.86■□□□□ 0.93
CTSA-206ENST00000480961 MT-CO1P00395 513 aa20.86■□□□□ 0.93
CTSA-206ENST00000480961 CD48P09326 243 aa20.86■□□□□ 0.93
CTSA-206ENST00000480961 MAN1A1P33908 653 aa20.86■□□□□ 0.93
CTSA-206ENST00000480961 ARHGAP25P42331 645 aa20.86■□□□□ 0.93
CTSA-206ENST00000480961 MAPKAPK2P49137 400 aa20.86■□□□□ 0.93
CTSA-206ENST00000480961 MRE11P49959 708 aa20.86■□□□□ 0.93
CTSA-206ENST00000480961 LEKR1Q6ZMV7 388 aa20.86■□□□□ 0.93
CTSA-206ENST00000480961 RFX8Q6ZV50 586 aa20.86■□□□□ 0.93
CTSA-206ENST00000480961 KIAA1328Q86T90 577 aa20.86■□□□□ 0.93
CTSA-206ENST00000480961 MDGA1Q8NFP4 955 aa20.86■□□□□ 0.93
CTSA-206ENST00000480961 TEKT4Q8WW24 435 aa20.86■□□□□ 0.93
CTSA-206ENST00000480961 NELL1Q92832 810 aa20.86■□□□□ 0.93
CTSA-206ENST00000480961 PPP1R9BQ96SB3 815 aa20.86■□□□□ 0.93
CTSA-206ENST00000480961 NOL6Q9H6R4 1146 aaKnown RBP20.86■□□□□ 0.93
CTSA-206ENST00000480961 CATSPERBQ9H7T0 1116 aa20.86■□□□□ 0.93
CTSA-206ENST00000480961 PCDH18Q9HCL0 1135 aa20.86■□□□□ 0.93
CTSA-206ENST00000480961 ATP13A1Q9HD20 1204 aa20.86■□□□□ 0.93
CTSA-206ENST00000480961 VPS51Q9UID3 782 aa20.86■□□□□ 0.93
CTSA-206ENST00000480961 ACTL7AQ9Y615 435 aa20.86■□□□□ 0.93
CTSA-206ENST00000480961 CBX4O00257 560 aa20.85■□□□□ 0.93
CTSA-206ENST00000480961 AXIN1O15169 862 aa20.85■□□□□ 0.93
CTSA-206ENST00000480961 RAMP2O60895 175 aa20.85■□□□□ 0.93
CTSA-206ENST00000480961 SRPRAP08240 638 aaKnown RBP20.85■□□□□ 0.93
CTSA-206ENST00000480961 GABRG2P18507 467 aa20.85■□□□□ 0.93
CTSA-206ENST00000480961 NRLP54845 237 aa20.85■□□□□ 0.93
CTSA-206ENST00000480961 CDH6P55285 790 aa20.85■□□□□ 0.93
CTSA-206ENST00000480961 SULT2A1Q06520 285 aa20.85■□□□□ 0.93
CTSA-206ENST00000480961 MMRN1Q13201 1228 aa20.85■□□□□ 0.93
CTSA-206ENST00000480961 KRT81Q14533 505 aa20.85■□□□□ 0.93
CTSA-206ENST00000480961 STARD3Q14849 445 aa20.85■□□□□ 0.93
CTSA-206ENST00000480961 DPYSL2Q16555 572 aa20.85■□□□□ 0.93
CTSA-206ENST00000480961 IL31Q6EBC2 164 aa20.85■□□□□ 0.93
CTSA-206ENST00000480961 LONP2Q86WA8 852 aa20.85■□□□□ 0.93
CTSA-206ENST00000480961 CACUL1Q86Y37 369 aa20.85■□□□□ 0.93
CTSA-206ENST00000480961 ARHGEF2Q92974 986 aaKnown RBP20.85■□□□□ 0.93
CTSA-206ENST00000480961 CELF6Q96J87 481 aaKnown RBP20.85■□□□□ 0.93
CTSA-206ENST00000480961 PHOX2BQ99453 314 aa20.85■□□□□ 0.93
CTSA-206ENST00000480961 LCMT1Q9UIC8 334 aa20.85■□□□□ 0.93
CTSA-206ENST00000480961 MFHAS1Q9Y4C4 1052 aa20.85■□□□□ 0.93
CTSA-206ENST00000480961 WASH4PA8MWX3 477 aa20.84■□□□□ 0.93
CTSA-206ENST00000480961 H3BRJ5 948 aa20.84■□□□□ 0.93
CTSA-206ENST00000480961 K7ERQ8 282 aa20.84■□□□□ 0.93
CTSA-206ENST00000480961 FGF10O15520 208 aaPredicted RBP20.84■□□□□ 0.93
CTSA-206ENST00000480961 ALDH1A2O94788 518 aa20.84■□□□□ 0.93
CTSA-206ENST00000480961 VAV1P15498 845 aa20.84■□□□□ 0.93
CTSA-206ENST00000480961 ERCC2P18074 760 aa20.84■□□□□ 0.93
CTSA-206ENST00000480961 COMTP21964 271 aa20.84■□□□□ 0.93
CTSA-206ENST00000480961 AMPD1P23109 780 aa20.84■□□□□ 0.93
CTSA-206ENST00000480961 HOXA6P31267 233 aa20.84■□□□□ 0.93
CTSA-206ENST00000480961 VAV2P52735 878 aa20.84■□□□□ 0.93
CTSA-206ENST00000480961 NAP1L1P55209 391 aaKnown RBP20.84■□□□□ 0.93
CTSA-206ENST00000480961 KRT83P78385 493 aa20.84■□□□□ 0.93
CTSA-206ENST00000480961 POLD3Q15054 466 aaPredicted RBP20.84■□□□□ 0.93
CTSA-206ENST00000480961 E2F5Q15329 346 aa20.84■□□□□ 0.93
CTSA-206ENST00000480961 ACCSLQ4AC99 568 aa20.84■□□□□ 0.93
CTSA-206ENST00000480961 ZFYVE27Q5T4F4 411 aa20.84■□□□□ 0.93
CTSA-206ENST00000480961 ZNF783Q6ZMS7 281 aa20.84■□□□□ 0.93
CTSA-206ENST00000480961 POLNQ7Z5Q5 900 aa20.84■□□□□ 0.93
CTSA-206ENST00000480961 WDR5BQ86VZ2 330 aa20.84■□□□□ 0.93
CTSA-206ENST00000480961 ZNF354CQ86Y25 554 aa20.84■□□□□ 0.93
CTSA-206ENST00000480961 LRRC8AQ8IWT6 810 aa20.84■□□□□ 0.93
CTSA-206ENST00000480961 KCTD6Q8NC69 237 aa20.84■□□□□ 0.93
CTSA-206ENST00000480961 ZBTB44Q8NCP5 570 aa20.84■□□□□ 0.93
CTSA-206ENST00000480961 C2orf49Q9BVC5 232 aaPredicted RBP20.84■□□□□ 0.93
CTSA-206ENST00000480961 KLC2Q9H0B6 622 aa20.84■□□□□ 0.93
CTSA-206ENST00000480961 PRSS16Q9NQE7 514 aa20.84■□□□□ 0.93
CTSA-206ENST00000480961 TRIM10Q9UDY6 481 aa20.84■□□□□ 0.93
CTSA-206ENST00000480961 SLC25A13Q9UJS0 675 aa20.84■□□□□ 0.93
CTSA-206ENST00000480961 WDR87Q6ZQQ6 2873 aa20.83■□□□□ 0.93
CTSA-206ENST00000480961 MYO15AQ9UKN7 3530 aa20.83■□□□□ 0.93
CTSA-206ENST00000480961 HRO43593 1189 aa20.83■□□□□ 0.93
CTSA-206ENST00000480961 SIN3BO75182 1162 aa20.83■□□□□ 0.93
CTSA-206ENST00000480961 ZMPSTE24O75844 475 aa20.83■□□□□ 0.93
CTSA-206ENST00000480961 NDUFV2P19404 249 aa20.83■□□□□ 0.93
CTSA-206ENST00000480961 HTR7P34969 479 aa20.83■□□□□ 0.93
CTSA-206ENST00000480961 ARL4AP40617 200 aa20.83■□□□□ 0.93
CTSA-206ENST00000480961 NHLH1Q02575 133 aa20.83■□□□□ 0.93
CTSA-206ENST00000480961 DPYSQ14117 519 aa20.83■□□□□ 0.93
CTSA-206ENST00000480961 RASSF3Q86WH2 238 aa20.83■□□□□ 0.93
CTSA-206ENST00000480961 DCAF4L2Q8NA75 395 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms