RNA–Protein interactions for RNA: ENST00000480058.5

PRPF4B-205, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 6,775 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-205ENST00000480058 RAB2BQ8WUD1 216 aa6.26□□□□□ -1.41
PRPF4B-205ENST00000480058 AFG1LQ8WV93 481 aa6.26□□□□□ -1.41
PRPF4B-205ENST00000480058 EZH1Q92800 747 aaPredicted RBP6.26□□□□□ -1.41
PRPF4B-205ENST00000480058 MMP19Q99542 508 aa6.26□□□□□ -1.41
PRPF4B-205ENST00000480058 ZNF408Q9H9D4 720 aa6.26□□□□□ -1.41
PRPF4B-205ENST00000480058 MAGEE1Q9HCI5 957 aa6.26□□□□□ -1.41
PRPF4B-205ENST00000480058 DNPEPQ9ULA0 475 aa6.26□□□□□ -1.41
PRPF4B-205ENST00000480058 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.26□□□□□ -1.41
PRPF4B-205ENST00000480058 CLDN25C9JDP6 229 aa6.26□□□□□ -1.41
PRPF4B-205ENST00000480058 IL1R1P14778 569 aa6.26□□□□□ -1.41
PRPF4B-205ENST00000480058 PAICSP22234 425 aaKnown RBP6.26□□□□□ -1.41
PRPF4B-205ENST00000480058 MIPP30301 263 aa6.26□□□□□ -1.41
PRPF4B-205ENST00000480058 MAPK9P45984 424 aa6.26□□□□□ -1.41
PRPF4B-205ENST00000480058 CASP5P51878 434 aa6.26□□□□□ -1.41
PRPF4B-205ENST00000480058 C2CD6Q53TS8 623 aa6.26□□□□□ -1.41
PRPF4B-205ENST00000480058 MICALL2Q8IY33 904 aa6.26□□□□□ -1.41
PRPF4B-205ENST00000480058 WNT8BQ93098 351 aa6.26□□□□□ -1.41
PRPF4B-205ENST00000480058 ZHX1-C8orf76Q96EF9 292 aa6.26□□□□□ -1.41
PRPF4B-205ENST00000480058 RPRD1AQ96P16 312 aaPredicted RBP6.26□□□□□ -1.41
PRPF4B-205ENST00000480058 NUDT12Q9BQG2 462 aa6.26□□□□□ -1.41
PRPF4B-205ENST00000480058 OSBPL7Q9BZF2 842 aa6.26□□□□□ -1.41
PRPF4B-205ENST00000480058 LHX5Q9H2C1 402 aa6.26□□□□□ -1.41
PRPF4B-205ENST00000480058 EHD1Q9H4M9 534 aa6.26□□□□□ -1.41
PRPF4B-205ENST00000480058 GIN1Q9NXP7 522 aa6.26□□□□□ -1.41
PRPF4B-205ENST00000480058 DPP3Q9NY33 737 aa6.26□□□□□ -1.41
PRPF4B-205ENST00000480058 CHORDC1Q9UHD1 332 aaPredicted RBP6.26□□□□□ -1.41
PRPF4B-205ENST00000480058 DHRS12A0PJE2 317 aa6.25□□□□□ -1.41
PRPF4B-205ENST00000480058 AQP12BA6NM10 295 aa6.25□□□□□ -1.41
PRPF4B-205ENST00000480058 POLRMTO00411 1230 aaKnown RBP6.25□□□□□ -1.41
PRPF4B-205ENST00000480058 PLA2G6O60733 806 aa6.25□□□□□ -1.41
PRPF4B-205ENST00000480058 SLITRK3O94933 977 aa6.25□□□□□ -1.41
PRPF4B-205ENST00000480058 ARIH2O95376 493 aa6.25□□□□□ -1.41
PRPF4B-205ENST00000480058 IL6P05231 212 aa6.25□□□□□ -1.41
PRPF4B-205ENST00000480058 CAP2P40123 477 aa6.25□□□□□ -1.41
PRPF4B-205ENST00000480058 USP39Q53GS9 565 aaKnown RBP6.25□□□□□ -1.41
PRPF4B-205ENST00000480058 MDH1BQ5I0G3 518 aa6.25□□□□□ -1.41
PRPF4B-205ENST00000480058 CYP4A22Q5TCH4 519 aa6.25□□□□□ -1.41
PRPF4B-205ENST00000480058 FOXR1Q6PIV2 292 aa6.25□□□□□ -1.41
PRPF4B-205ENST00000480058 AQP12AQ8IXF9 295 aa6.25□□□□□ -1.41
PRPF4B-205ENST00000480058 AHI1Q8N157 1196 aa6.25□□□□□ -1.41
PRPF4B-205ENST00000480058 CHCHD4Q8N4Q1 142 aa6.25□□□□□ -1.41
PRPF4B-205ENST00000480058 LRRC52Q8N7C0 313 aa6.25□□□□□ -1.41
PRPF4B-205ENST00000480058 SYTL5Q8TDW5 730 aaPredicted RBP6.25□□□□□ -1.41
PRPF4B-205ENST00000480058 UCMAQ8WVF2 138 aa6.25□□□□□ -1.41
PRPF4B-205ENST00000480058 RNF145Q96MT1 663 aa6.25□□□□□ -1.41
PRPF4B-205ENST00000480058 ZNF70Q9UC06 446 aaPredicted RBP6.25□□□□□ -1.41
PRPF4B-205ENST00000480058 REXO2Q9Y3B8 237 aaKnown RBP6.25□□□□□ -1.41
PRPF4B-205ENST00000480058 PTCH2Q9Y6C5 1203 aa6.25□□□□□ -1.41
PRPF4B-205ENST00000480058 C1orf167Q5SNV9 1468 aa6.25□□□□□ -1.41
PRPF4B-205ENST00000480058 FAM196BA6NMK8 535 aa6.25□□□□□ -1.41
PRPF4B-205ENST00000480058 DGKIO75912 1065 aa6.25□□□□□ -1.41
PRPF4B-205ENST00000480058 TRAF2Q12933 501 aa6.25□□□□□ -1.41
PRPF4B-205ENST00000480058 LPIN1Q14693 890 aa6.25□□□□□ -1.41
PRPF4B-205ENST00000480058 PLET1Q6UQ28 207 aa6.25□□□□□ -1.41
PRPF4B-205ENST00000480058 SCAIQ8N9R8 606 aa6.25□□□□□ -1.41
PRPF4B-205ENST00000480058 SLC9A7Q96T83 725 aa6.25□□□□□ -1.41
PRPF4B-205ENST00000480058 CINPQ9BW66 212 aaPredicted RBP6.25□□□□□ -1.41
PRPF4B-205ENST00000480058 FAM49BQ9NUQ9 324 aa6.25□□□□□ -1.41
PRPF4B-205ENST00000480058 SNTG2Q9NY99 539 aa6.25□□□□□ -1.41
PRPF4B-205ENST00000480058 FBXO5Q9UKT4 447 aa6.25□□□□□ -1.41
PRPF4B-205ENST00000480058 ING4Q9UNL4 249 aa6.25□□□□□ -1.41
PRPF4B-205ENST00000480058 CCDC189A1A4V9 331 aa6.25□□□□□ -1.41
PRPF4B-205ENST00000480058 DHFRP00374 187 aa6.25□□□□□ -1.41
PRPF4B-205ENST00000480058 PSEN1P49768 467 aa6.25□□□□□ -1.41
PRPF4B-205ENST00000480058 BMPR2Q13873 1038 aa6.25□□□□□ -1.41
PRPF4B-205ENST00000480058 GNA13Q14344 377 aa6.25□□□□□ -1.41
PRPF4B-205ENST00000480058 ARHGAP17Q68EM7 881 aa6.25□□□□□ -1.41
PRPF4B-205ENST00000480058 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.25□□□□□ -1.41
PRPF4B-205ENST00000480058 ANKRD52Q8NB46 1076 aa6.25□□□□□ -1.41
PRPF4B-205ENST00000480058 PROX1Q92786 737 aa6.25□□□□□ -1.41
PRPF4B-205ENST00000480058 UNC93B1Q9H1C4 597 aa6.25□□□□□ -1.41
PRPF4B-205ENST00000480058 CLIC5Q9NZA1 410 aa6.25□□□□□ -1.41
PRPF4B-205ENST00000480058 IFT80Q9P2H3 777 aaPredicted RBP6.25□□□□□ -1.41
PRPF4B-205ENST00000480058 MORF4L1Q9UBU8 362 aa6.25□□□□□ -1.41
PRPF4B-205ENST00000480058 DUSP12Q9UNI6 340 aa6.25□□□□□ -1.41
PRPF4B-205ENST00000480058 H7C4K7 107 aa6.25□□□□□ -1.41
PRPF4B-205ENST00000480058 AVILO75366 819 aa6.25□□□□□ -1.41
PRPF4B-205ENST00000480058 TULP3O75386 442 aa6.25□□□□□ -1.41
PRPF4B-205ENST00000480058 AP1G2O75843 785 aa6.25□□□□□ -1.41
PRPF4B-205ENST00000480058 LDOC1O95751 146 aaPredicted RBP6.25□□□□□ -1.41
PRPF4B-205ENST00000480058 CLTBP09497 229 aa6.25□□□□□ -1.41
PRPF4B-205ENST00000480058 MMP8P22894 467 aa6.25□□□□□ -1.41
PRPF4B-205ENST00000480058 CXCR2P25025 360 aa6.25□□□□□ -1.41
PRPF4B-205ENST00000480058 GRK3P35626 688 aa6.25□□□□□ -1.41
PRPF4B-205ENST00000480058 CSHL1Q14406 222 aa6.25□□□□□ -1.41
PRPF4B-205ENST00000480058 CYP1B1Q16678 543 aa6.25□□□□□ -1.41
PRPF4B-205ENST00000480058 TMEM44Q2T9K0 475 aa6.25□□□□□ -1.41
PRPF4B-205ENST00000480058 SZRD1Q7Z422 152 aa6.25□□□□□ -1.41
PRPF4B-205ENST00000480058 PROSER1Q86XN7 944 aa6.25□□□□□ -1.41
PRPF4B-205ENST00000480058 EMC1Q8N766 993 aa6.25□□□□□ -1.41
PRPF4B-205ENST00000480058 DDX17Q92841 729 aaKnown RBP6.25□□□□□ -1.41
PRPF4B-205ENST00000480058 ABHD8Q96I13 439 aa6.25□□□□□ -1.41
PRPF4B-205ENST00000480058 COLEC11Q9BWP8 271 aa6.25□□□□□ -1.41
PRPF4B-205ENST00000480058 EBF2Q9HAK2 575 aa6.25□□□□□ -1.41
PRPF4B-205ENST00000480058 ERGIC3Q9Y282 383 aa6.25□□□□□ -1.41
PRPF4B-205ENST00000480058 PEX16Q9Y5Y5 336 aa6.25□□□□□ -1.41
PRPF4B-205ENST00000480058 hCG_1818297A0A087WSY0 165 aa6.25□□□□□ -1.41
PRPF4B-205ENST00000480058 F5H5T6 163 aa6.25□□□□□ -1.41
PRPF4B-205ENST00000480058 NR5A2O00482 541 aa6.25□□□□□ -1.41
PRPF4B-205ENST00000480058 PAPSS1O43252 624 aaPredicted RBP6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms