RNA–Protein interactions for RNA: ENST00000479653.5

CCDC18-208, Transcript of coiled-coil domain containing 18, humanhuman

TSL 3

Gene CCDC18, Length 541 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18-208ENST00000479653 BORAQ6PGQ7 559 aa11.54□□□□□ -0.56
CCDC18-208ENST00000479653 MMS22LQ6ZRQ5 1243 aa11.54□□□□□ -0.56
CCDC18-208ENST00000479653 ATCAYQ86WG3 371 aa11.54□□□□□ -0.56
CCDC18-208ENST00000479653 CCDC117Q8IWD4 279 aaPredicted RBP11.54□□□□□ -0.56
CCDC18-208ENST00000479653 CARNMT1Q8N4J0 409 aa11.54□□□□□ -0.56
CCDC18-208ENST00000479653 ZNF557Q8N988 423 aaPredicted RBP11.54□□□□□ -0.56
CCDC18-208ENST00000479653 KDM1BQ8NB78 822 aa11.54□□□□□ -0.56
CCDC18-208ENST00000479653 XXYLT1Q8NBI6 393 aa11.54□□□□□ -0.56
CCDC18-208ENST00000479653 FIBINQ8TAL6 211 aa11.54□□□□□ -0.56
CCDC18-208ENST00000479653 RNF139Q8WU17 664 aa11.54□□□□□ -0.56
CCDC18-208ENST00000479653 PTPRN2Q92932 1015 aa11.54□□□□□ -0.56
CCDC18-208ENST00000479653 RPL10LQ96L21 214 aaKnown RBP11.54□□□□□ -0.56
CCDC18-208ENST00000479653 FUCA2Q9BTY2 467 aa11.54□□□□□ -0.56
CCDC18-208ENST00000479653 SCAND2PQ9GZW5 306 aaPredicted RBP11.54□□□□□ -0.56
CCDC18-208ENST00000479653 FZD3Q9NPG1 666 aa11.54□□□□□ -0.56
CCDC18-208ENST00000479653 ZNF71Q9NQZ8 489 aaPredicted RBP11.54□□□□□ -0.56
CCDC18-208ENST00000479653 TMPRSS4Q9NRS4 437 aa11.54□□□□□ -0.56
CCDC18-208ENST00000479653 STK17AQ9UEE5 414 aa11.54□□□□□ -0.56
CCDC18-208ENST00000479653 INTS6Q9UL03 887 aaKnown RBP11.54□□□□□ -0.56
CCDC18-208ENST00000479653 TP53BP1Q12888 1972 aaPredicted RBP11.54□□□□□ -0.56
CCDC18-208ENST00000479653 SLC7A4O43246 635 aa11.53□□□□□ -0.56
CCDC18-208ENST00000479653 AGFG2O95081 481 aa11.53□□□□□ -0.56
CCDC18-208ENST00000479653 BMP15O95972 392 aa11.53□□□□□ -0.56
CCDC18-208ENST00000479653 SRPRAP08240 638 aaKnown RBP11.53□□□□□ -0.56
CCDC18-208ENST00000479653 JMJD7P0C870 316 aa11.53□□□□□ -0.56
CCDC18-208ENST00000479653 VAV1P15498 845 aa11.53□□□□□ -0.56
CCDC18-208ENST00000479653 NNMTP40261 264 aa11.53□□□□□ -0.56
CCDC18-208ENST00000479653 NUMBP49757 651 aa11.53□□□□□ -0.56
CCDC18-208ENST00000479653 POLE2P56282 527 aa11.53□□□□□ -0.56
CCDC18-208ENST00000479653 CLDN2P57739 230 aa11.53□□□□□ -0.56
CCDC18-208ENST00000479653 ECT2LQ008S8 904 aa11.53□□□□□ -0.56
CCDC18-208ENST00000479653 ELAVL3Q14576 367 aaKnown RBP11.53□□□□□ -0.56
CCDC18-208ENST00000479653 PITRM1Q5JRX3 1037 aa11.53□□□□□ -0.56
CCDC18-208ENST00000479653 MPP7Q5T2T1 576 aa11.53□□□□□ -0.56
CCDC18-208ENST00000479653 PIK3R6Q5UE93 754 aa11.53□□□□□ -0.56
CCDC18-208ENST00000479653 ZFAND4Q86XD8 727 aa11.53□□□□□ -0.56
CCDC18-208ENST00000479653 TMEM145Q8NBT3 493 aa11.53□□□□□ -0.56
CCDC18-208ENST00000479653 ZNF548Q8NEK5 533 aaPredicted RBP11.53□□□□□ -0.56
CCDC18-208ENST00000479653 NDRG1Q92597 394 aaKnown RBP11.53□□□□□ -0.56
CCDC18-208ENST00000479653 NOX5Q96PH1 765 aa11.53□□□□□ -0.56
CCDC18-208ENST00000479653 TWNKQ96RR1 684 aa11.53□□□□□ -0.56
CCDC18-208ENST00000479653 IL12RB2Q99665 862 aa11.53□□□□□ -0.56
CCDC18-208ENST00000479653 DUSP16Q9BY84 665 aa11.53□□□□□ -0.56
CCDC18-208ENST00000479653 AGPAT3Q9NRZ7 376 aa11.53□□□□□ -0.56
CCDC18-208ENST00000479653 PISDQ9UG56 409 aa11.53□□□□□ -0.56
CCDC18-208ENST00000479653 STOML2Q9UJZ1 356 aa11.53□□□□□ -0.56
CCDC18-208ENST00000479653 HBS1LQ9Y450 684 aaKnown RBP11.53□□□□□ -0.56
CCDC18-208ENST00000479653 C2CD3Q4AC94 2353 aa11.53□□□□□ -0.56
CCDC18-208ENST00000479653 ICE1Q9Y2F5 2266 aa11.52□□□□□ -0.56
CCDC18-208ENST00000479653 A0A1W2PQU0 124 aa11.52□□□□□ -0.57
CCDC18-208ENST00000479653 MOCS3O95396 460 aa11.52□□□□□ -0.57
CCDC18-208ENST00000479653 POU3F2P20265 443 aaPredicted RBP11.52□□□□□ -0.57
CCDC18-208ENST00000479653 AKT2P31751 481 aa11.52□□□□□ -0.57
CCDC18-208ENST00000479653 HOXD13P35453 343 aa11.52□□□□□ -0.57
CCDC18-208ENST00000479653 RPIAP49247 311 aa11.52□□□□□ -0.57
CCDC18-208ENST00000479653 PDX1P52945 283 aa11.52□□□□□ -0.57
CCDC18-208ENST00000479653 CNTN1Q12860 1018 aa11.52□□□□□ -0.57
CCDC18-208ENST00000479653 EIF3IQ13347 325 aaKnown RBP11.52□□□□□ -0.57
CCDC18-208ENST00000479653 CDH18Q13634 790 aa11.52□□□□□ -0.57
CCDC18-208ENST00000479653 SGSM1Q2NKQ1 1148 aa11.52□□□□□ -0.57
CCDC18-208ENST00000479653 FSCBQ5H9T9 825 aa11.52□□□□□ -0.57
CCDC18-208ENST00000479653 PPP1R26Q5T8A7 1209 aaPredicted RBP11.52□□□□□ -0.57
CCDC18-208ENST00000479653 FAM46CQ5VWP2 391 aa11.52□□□□□ -0.57
CCDC18-208ENST00000479653 Q6ZSR6 202 aa11.52□□□□□ -0.57
CCDC18-208ENST00000479653 CCDC65Q8IXS2 484 aa11.52□□□□□ -0.57
CCDC18-208ENST00000479653 SLC22A18ASQ8N1D0 253 aa11.52□□□□□ -0.57
CCDC18-208ENST00000479653 WDR48Q8TAF3 677 aa11.52□□□□□ -0.57
CCDC18-208ENST00000479653 SPATA20Q8TB22 786 aa11.52□□□□□ -0.57
CCDC18-208ENST00000479653 LMX1AQ8TE12 382 aa11.52□□□□□ -0.57
CCDC18-208ENST00000479653 EDEM1Q92611 657 aa11.52□□□□□ -0.57
CCDC18-208ENST00000479653 GLMNQ92990 594 aa11.52□□□□□ -0.57
CCDC18-208ENST00000479653 IFT43Q96FT9 208 aa11.52□□□□□ -0.57
CCDC18-208ENST00000479653 LMLNQ96KR4 655 aa11.52□□□□□ -0.57
CCDC18-208ENST00000479653 CCDC3Q9BQI4 270 aa11.52□□□□□ -0.57
CCDC18-208ENST00000479653 NT5C1AQ9BXI3 368 aa11.52□□□□□ -0.57
CCDC18-208ENST00000479653 PANK2Q9BZ23 570 aa11.52□□□□□ -0.57
CCDC18-208ENST00000479653 FOXP3Q9BZS1 431 aa11.52□□□□□ -0.57
CCDC18-208ENST00000479653 STRADBQ9C0K7 418 aa11.52□□□□□ -0.57
CCDC18-208ENST00000479653 OLA1Q9NTK5 396 aaKnown RBP11.52□□□□□ -0.57
CCDC18-208ENST00000479653 SALL4Q9UJQ4 1053 aa11.52□□□□□ -0.57
CCDC18-208ENST00000479653 ITPR3Q14573 2671 aa11.52□□□□□ -0.57
CCDC18-208ENST00000479653 A1L4Q6 167 aa11.51□□□□□ -0.57
CCDC18-208ENST00000479653 FRMD3A2A2Y4 597 aa11.51□□□□□ -0.57
CCDC18-208ENST00000479653 TYW5A2RUC4 315 aaKnown RBP11.51□□□□□ -0.57
CCDC18-208ENST00000479653 H3BM21 787 aa11.51□□□□□ -0.57
CCDC18-208ENST00000479653 NVLO15381 856 aaKnown RBP11.51□□□□□ -0.57
CCDC18-208ENST00000479653 TGFB1I1O43294 461 aa11.51□□□□□ -0.57
CCDC18-208ENST00000479653 AQP9O43315 295 aa11.51□□□□□ -0.57
CCDC18-208ENST00000479653 MSI1O43347 362 aaKnown RBP11.51□□□□□ -0.57
CCDC18-208ENST00000479653 VNN1O95497 513 aa11.51□□□□□ -0.57
CCDC18-208ENST00000479653 LATS1O95835 1130 aa11.51□□□□□ -0.57
CCDC18-208ENST00000479653 ZBED1O96006 694 aa11.51□□□□□ -0.57
CCDC18-208ENST00000479653 ZNF18P17022 549 aa11.51□□□□□ -0.57
CCDC18-208ENST00000479653 CD58P19256 250 aa11.51□□□□□ -0.57
CCDC18-208ENST00000479653 SLC11A2P49281 568 aa11.51□□□□□ -0.57
CCDC18-208ENST00000479653 STK19P49842 368 aaPredicted RBP11.51□□□□□ -0.57
CCDC18-208ENST00000479653 TKTL1P51854 596 aa11.51□□□□□ -0.57
CCDC18-208ENST00000479653 DNM1Q05193 864 aaKnown RBP11.51□□□□□ -0.57
CCDC18-208ENST00000479653 AGBL4Q5VU57 503 aa11.51□□□□□ -0.57
CCDC18-208ENST00000479653 OR6B2Q6IFH4 312 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms