RNA–Protein interactions for RNA: ENST00000478420.1

SMARCA1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 3

Gene SMARCA1, Length 561 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-204ENST00000478420 PCSK5Q92824 1860 aa4.32□□□□□ -1.72
SMARCA1-204ENST00000478420 TRBV5-3A0A0A0MS03 114 aa4.31□□□□□ -1.72
SMARCA1-204ENST00000478420 KIR2DS5A0A0G2JLQ3 304 aa4.31□□□□□ -1.72
SMARCA1-204ENST00000478420 KIR2DS3K7RE56 304 aa4.31□□□□□ -1.72
SMARCA1-204ENST00000478420 SYN3O14994 580 aa4.31□□□□□ -1.72
SMARCA1-204ENST00000478420 SH3BP5O60239 455 aa4.31□□□□□ -1.72
SMARCA1-204ENST00000478420 LCKP06239 509 aa4.31□□□□□ -1.72
SMARCA1-204ENST00000478420 LYL1P12980 280 aa4.31□□□□□ -1.72
SMARCA1-204ENST00000478420 RHAGQ02094 409 aa4.31□□□□□ -1.72
SMARCA1-204ENST00000478420 GOLGA8FQ08AF8 430 aa4.31□□□□□ -1.72
SMARCA1-204ENST00000478420 RBMS2Q15434 407 aaKnown RBP4.31□□□□□ -1.72
SMARCA1-204ENST00000478420 CBWD5Q5RIA9 395 aa4.31□□□□□ -1.72
SMARCA1-204ENST00000478420 MRPL10Q7Z7H8 261 aaKnown RBP4.31□□□□□ -1.72
SMARCA1-204ENST00000478420 GALNT7Q86SF2 657 aa4.31□□□□□ -1.72
SMARCA1-204ENST00000478420 DDIASQ8IXT1 998 aa4.31□□□□□ -1.72
SMARCA1-204ENST00000478420 USP38Q8NB14 1042 aa4.31□□□□□ -1.72
SMARCA1-204ENST00000478420 SLC44A5Q8NCS7 719 aa4.31□□□□□ -1.72
SMARCA1-204ENST00000478420 PPM1EQ8WY54 764 aa4.31□□□□□ -1.72
SMARCA1-204ENST00000478420 KAT2AQ92830 837 aa4.31□□□□□ -1.72
SMARCA1-204ENST00000478420 UBXN10Q96LJ8 280 aa4.31□□□□□ -1.72
SMARCA1-204ENST00000478420 PPP1R10Q96QC0 940 aaKnown RBP4.31□□□□□ -1.72
SMARCA1-204ENST00000478420 RIC8AQ9NPQ8 531 aa4.31□□□□□ -1.72
SMARCA1-204ENST00000478420 TMEM248Q9NWD8 314 aa4.31□□□□□ -1.72
SMARCA1-204ENST00000478420 TCRBV7S3A2A0A539 114 aa4.3□□□□□ -1.72
SMARCA1-204ENST00000478420 TMEM247A6NEH6 219 aa4.3□□□□□ -1.72
SMARCA1-204ENST00000478420 ANP32CO43423 234 aa4.3□□□□□ -1.72
SMARCA1-204ENST00000478420 METTL18O95568 372 aa4.3□□□□□ -1.72
SMARCA1-204ENST00000478420 WNT1P04628 370 aa4.3□□□□□ -1.72
SMARCA1-204ENST00000478420 CNPP09543 421 aaKnown RBP4.3□□□□□ -1.72
SMARCA1-204ENST00000478420 CPA1P15085 419 aa4.3□□□□□ -1.72
SMARCA1-204ENST00000478420 TYK2P29597 1187 aa4.3□□□□□ -1.72
SMARCA1-204ENST00000478420 AVPR2P30518 371 aa4.3□□□□□ -1.72
SMARCA1-204ENST00000478420 MAPK9P45984 424 aa4.3□□□□□ -1.72
SMARCA1-204ENST00000478420 ZNF81P51508 661 aa4.3□□□□□ -1.72
SMARCA1-204ENST00000478420 ZBTB16Q05516 673 aa4.3□□□□□ -1.72
SMARCA1-204ENST00000478420 PMPCAQ10713 525 aa4.3□□□□□ -1.72
SMARCA1-204ENST00000478420 SEMA3AQ14563 771 aa4.3□□□□□ -1.72
SMARCA1-204ENST00000478420 RABEP1Q15276 862 aa4.3□□□□□ -1.72
SMARCA1-204ENST00000478420 ALG10Q5BKT4 473 aa4.3□□□□□ -1.72
SMARCA1-204ENST00000478420 ALG10BQ5I7T1 473 aa4.3□□□□□ -1.72
SMARCA1-204ENST00000478420 TTC39AQ5SRH9 613 aa4.3□□□□□ -1.72
SMARCA1-204ENST00000478420 FAM171A1Q5VUB5 890 aa4.3□□□□□ -1.72
SMARCA1-204ENST00000478420 DENND1BQ6P3S1 775 aa4.3□□□□□ -1.72
SMARCA1-204ENST00000478420 CYP26C1Q6V0L0 522 aa4.3□□□□□ -1.72
SMARCA1-204ENST00000478420 RNF144BQ7Z419 303 aa4.3□□□□□ -1.72
SMARCA1-204ENST00000478420 NME8Q8N427 588 aa4.3□□□□□ -1.72
SMARCA1-204ENST00000478420 C2CD4CQ8TF44 421 aa4.3□□□□□ -1.72
SMARCA1-204ENST00000478420 ZFYVE19Q96K21 471 aa4.3□□□□□ -1.72
SMARCA1-204ENST00000478420 TWNKQ96RR1 684 aa4.3□□□□□ -1.72
SMARCA1-204ENST00000478420 TMEM79Q9BSE2 394 aa4.3□□□□□ -1.72
SMARCA1-204ENST00000478420 TRMOQ9BU70 441 aa4.3□□□□□ -1.72
SMARCA1-204ENST00000478420 CADM1Q9BY67 442 aaKnown RBP4.3□□□□□ -1.72
SMARCA1-204ENST00000478420 SPRTNQ9H040 489 aaPredicted RBP4.3□□□□□ -1.72
SMARCA1-204ENST00000478420 AAMDCQ9H7C9 122 aa4.3□□□□□ -1.72
SMARCA1-204ENST00000478420 ACAD9Q9H845 621 aa4.3□□□□□ -1.72
SMARCA1-204ENST00000478420 THSD1Q9NS62 852 aa4.3□□□□□ -1.72
SMARCA1-204ENST00000478420 PNMA2Q9UL42 364 aa4.3□□□□□ -1.72
SMARCA1-204ENST00000478420 SUFUQ9UMX1 484 aa4.3□□□□□ -1.72
SMARCA1-204ENST00000478420 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.3□□□□□ -1.72
SMARCA1-204ENST00000478420 COL3A1P02461 1466 aaPredicted RBP4.3□□□□□ -1.72
SMARCA1-204ENST00000478420 FOXO6A8MYZ6 492 aa4.29□□□□□ -1.72
SMARCA1-204ENST00000478420 PPEF2O14830 753 aa4.29□□□□□ -1.72
SMARCA1-204ENST00000478420 NPHP1O15259 732 aa4.29□□□□□ -1.72
SMARCA1-204ENST00000478420 TLX3O43711 291 aaPredicted RBP4.29□□□□□ -1.72
SMARCA1-204ENST00000478420 TSPAN3O60637 253 aa4.29□□□□□ -1.72
SMARCA1-204ENST00000478420 MOSPD3O75425 235 aa4.29□□□□□ -1.72
SMARCA1-204ENST00000478420 NEURL1O76050 574 aa4.29□□□□□ -1.72
SMARCA1-204ENST00000478420 CKMT1AP12532 417 aa4.29□□□□□ -1.72
SMARCA1-204ENST00000478420 PRF1P14222 555 aa4.29□□□□□ -1.72
SMARCA1-204ENST00000478420 ARSAP15289 507 aa4.29□□□□□ -1.72
SMARCA1-204ENST00000478420 CYP2J2P51589 502 aa4.29□□□□□ -1.72
SMARCA1-204ENST00000478420 UBE3AQ05086 875 aa4.29□□□□□ -1.72
SMARCA1-204ENST00000478420 MTX1Q13505 466 aa4.29□□□□□ -1.72
SMARCA1-204ENST00000478420 SMTNL2Q2TAL5 461 aa4.29□□□□□ -1.72
SMARCA1-204ENST00000478420 PLK5Q496M5 336 aa4.29□□□□□ -1.72
SMARCA1-204ENST00000478420 C5orf22Q49AR2 442 aa4.29□□□□□ -1.72
SMARCA1-204ENST00000478420 C6orf10Q5SRN2 563 aa4.29□□□□□ -1.72
SMARCA1-204ENST00000478420 VWA5B1Q5TIE3 1220 aa4.29□□□□□ -1.72
SMARCA1-204ENST00000478420 AADACL2Q6P093 401 aa4.29□□□□□ -1.72
SMARCA1-204ENST00000478420 B4GALNT4Q76KP1 1039 aa4.29□□□□□ -1.72
SMARCA1-204ENST00000478420 IGFN1Q86VF2 1251 aa4.29□□□□□ -1.72
SMARCA1-204ENST00000478420 LRRTM4Q86VH4 590 aa4.29□□□□□ -1.72
SMARCA1-204ENST00000478420 BRSK2Q8IWQ3 736 aa4.29□□□□□ -1.72
SMARCA1-204ENST00000478420 TMEM217Q8N7C4 229 aa4.29□□□□□ -1.72
SMARCA1-204ENST00000478420 MPLKIPQ8TAP9 179 aa4.29□□□□□ -1.72
SMARCA1-204ENST00000478420 NCSTNQ92542 709 aa4.29□□□□□ -1.72
SMARCA1-204ENST00000478420 CENPIQ92674 756 aaPredicted RBP4.29□□□□□ -1.72
SMARCA1-204ENST00000478420 EME1Q96AY2 570 aa4.29□□□□□ -1.72
SMARCA1-204ENST00000478420 MASTLQ96GX5 879 aa4.29□□□□□ -1.72
SMARCA1-204ENST00000478420 ZNF778Q96MU6 729 aa4.29□□□□□ -1.72
SMARCA1-204ENST00000478420 C1QTNF7Q9BXJ2 289 aa4.29□□□□□ -1.72
SMARCA1-204ENST00000478420 FRMD8Q9BZ67 464 aaPredicted RBP4.29□□□□□ -1.72
SMARCA1-204ENST00000478420 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.29□□□□□ -1.727e-8■■■□□ 17.9
SMARCA1-204ENST00000478420 IL21RQ9HBE5 538 aa4.29□□□□□ -1.72
SMARCA1-204ENST00000478420 Q9N2J8 555 aa4.29□□□□□ -1.72
SMARCA1-204ENST00000478420 RRN3Q9NYV6 651 aa4.29□□□□□ -1.72
SMARCA1-204ENST00000478420 MSRB1Q9NZV6 116 aa4.29□□□□□ -1.72
SMARCA1-204ENST00000478420 HEY2Q9UBP5 337 aa4.29□□□□□ -1.72
SMARCA1-204ENST00000478420 GDAQ9Y2T3 454 aa4.29□□□□□ -1.72
SMARCA1-204ENST00000478420 VWA3AA6NCI4 1184 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms