RNA–Protein interactions for RNA: ENST00000478279.5

APTX-222, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 684 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-222ENST00000478279 CFAP52Q8N1V2 620 aa10.93□□□□□ -0.66
APTX-222ENST00000478279 EXD3Q8N9H8 876 aa10.93□□□□□ -0.66
APTX-222ENST00000478279 TMEM145Q8NBT3 493 aa10.93□□□□□ -0.66
APTX-222ENST00000478279 NUCKS1Q9H1E3 243 aaKnown RBP10.93□□□□□ -0.66
APTX-222ENST00000478279 MMRN2Q9H8L6 949 aa10.93□□□□□ -0.66
APTX-222ENST00000478279 EXOC1Q9NV70 894 aa10.93□□□□□ -0.66
APTX-222ENST00000478279 SARDHQ9UL12 918 aa10.93□□□□□ -0.66
APTX-222ENST00000478279 TRAF3IP3Q9Y228 551 aa10.93□□□□□ -0.66
APTX-222ENST00000478279 PCDHGA8Q9Y5G5 932 aa10.93□□□□□ -0.66
APTX-222ENST00000478279 U3KQA8 63 aa10.93□□□□□ -0.66
APTX-222ENST00000478279 RP1P56715 2156 aa10.93□□□□□ -0.66
APTX-222ENST00000478279 NOTCH2Q04721 2471 aa10.93□□□□□ -0.66
APTX-222ENST00000478279 SCAMP1O15126 338 aa10.92□□□□□ -0.66
APTX-222ENST00000478279 SLC31A1O15431 190 aa10.92□□□□□ -0.66
APTX-222ENST00000478279 NTRK1P04629 796 aa10.92□□□□□ -0.66
APTX-222ENST00000478279 SETSIPP0DME0 302 aa10.92□□□□□ -0.66
APTX-222ENST00000478279 LCP1P13796 627 aa10.92□□□□□ -0.66
APTX-222ENST00000478279 VAV1P15498 845 aa10.92□□□□□ -0.66
APTX-222ENST00000478279 NR2F2P24468 414 aa10.92□□□□□ -0.66
APTX-222ENST00000478279 GTF2H1P32780 548 aa10.92□□□□□ -0.66
APTX-222ENST00000478279 SULT2A1Q06520 285 aa10.92□□□□□ -0.66
APTX-222ENST00000478279 CNTN1Q12860 1018 aa10.92□□□□□ -0.66
APTX-222ENST00000478279 SLC12A1Q13621 1099 aa10.92□□□□□ -0.66
APTX-222ENST00000478279 NFIL3Q16649 462 aa10.92□□□□□ -0.66
APTX-222ENST00000478279 AGBL4Q5VU57 503 aa10.92□□□□□ -0.66
APTX-222ENST00000478279 DSG4Q86SJ6 1040 aa10.92□□□□□ -0.66
APTX-222ENST00000478279 FAM186BQ8IYM0 893 aa10.92□□□□□ -0.66
APTX-222ENST00000478279 GRAMD1CQ8IYS0 662 aa10.92□□□□□ -0.66
APTX-222ENST00000478279 UBA3Q8TBC4 463 aa10.92□□□□□ -0.66
APTX-222ENST00000478279 IFI44Q8TCB0 444 aa10.92□□□□□ -0.66
APTX-222ENST00000478279 FRS2Q8WU20 508 aa10.92□□□□□ -0.66
APTX-222ENST00000478279 OR8D1Q8WZ84 308 aa10.92□□□□□ -0.66
APTX-222ENST00000478279 IRGQQ8WZA9 623 aa10.92□□□□□ -0.66
APTX-222ENST00000478279 SEMA4DQ92854 862 aa10.92□□□□□ -0.66
APTX-222ENST00000478279 IFT43Q96FT9 208 aa10.92□□□□□ -0.66
APTX-222ENST00000478279 ATXN7L3BQ96GX2 97 aa10.92□□□□□ -0.66
APTX-222ENST00000478279 PRR11Q96HE9 360 aaPredicted RBP10.92□□□□□ -0.66
APTX-222ENST00000478279 FCRL2Q96LA5 508 aaPredicted RBP10.92□□□□□ -0.66
APTX-222ENST00000478279 ZNF396Q96N95 335 aaPredicted RBP10.92□□□□□ -0.66
APTX-222ENST00000478279 DUSP23Q9BVJ7 150 aa10.92□□□□□ -0.66
APTX-222ENST00000478279 PREBQ9HCU5 417 aa10.92□□□□□ -0.66
APTX-222ENST00000478279 RELNP78509 3460 aa10.92□□□□□ -0.66
APTX-222ENST00000478279 NBASA2RRP1 2371 aa10.91□□□□□ -0.66
APTX-222ENST00000478279 CDRT15L2A8MXV6 281 aa10.91□□□□□ -0.66
APTX-222ENST00000478279 K7ESM1 405 aa10.91□□□□□ -0.66
APTX-222ENST00000478279 YEATS4O95619 227 aa10.91□□□□□ -0.66
APTX-222ENST00000478279 LTFP02788 710 aa10.91□□□□□ -0.66
APTX-222ENST00000478279 CD19P15391 556 aa10.91□□□□□ -0.66
APTX-222ENST00000478279 TGM2P21980 687 aa10.91□□□□□ -0.66
APTX-222ENST00000478279 PSMC2P35998 433 aaKnown RBP10.91□□□□□ -0.66
APTX-222ENST00000478279 MLLT3P42568 568 aaPredicted RBP10.91□□□□□ -0.66
APTX-222ENST00000478279 VASPP50552 380 aaPredicted RBP10.91□□□□□ -0.66
APTX-222ENST00000478279 MCCD1P59942 119 aaPredicted RBP10.91□□□□□ -0.66
APTX-222ENST00000478279 CLN3Q13286 438 aa10.91□□□□□ -0.66
APTX-222ENST00000478279 NNTQ13423 1086 aa10.91□□□□□ -0.66
APTX-222ENST00000478279 ZSCAN23Q3MJ62 389 aa10.91□□□□□ -0.66
APTX-222ENST00000478279 ZNF574Q6ZN55 896 aaPredicted RBP10.91□□□□□ -0.66
APTX-222ENST00000478279 ATG14Q6ZNE5 492 aa10.91□□□□□ -0.66
APTX-222ENST00000478279 CLEC14AQ86T13 490 aa10.91□□□□□ -0.66
APTX-222ENST00000478279 CEP57L1Q8IYX8 460 aa10.91□□□□□ -0.66
APTX-222ENST00000478279 ARL14Q8N4G2 192 aa10.91□□□□□ -0.66
APTX-222ENST00000478279 FBXL13Q8NEE6 735 aa10.91□□□□□ -0.66
APTX-222ENST00000478279 OR13H1Q8NG92 308 aa10.91□□□□□ -0.66
APTX-222ENST00000478279 TPCN2Q8NHX9 752 aa10.91□□□□□ -0.66
APTX-222ENST00000478279 SLC39A13Q96H72 371 aa10.91□□□□□ -0.66
APTX-222ENST00000478279 CCNL2Q96S94 520 aaPredicted RBP10.91□□□□□ -0.66
APTX-222ENST00000478279 MYOCQ99972 504 aa10.91□□□□□ -0.66
APTX-222ENST00000478279 CALN1Q9BXU9 219 aa10.91□□□□□ -0.66
APTX-222ENST00000478279 CAAP1Q9H8G2 361 aa10.91□□□□□ -0.66
APTX-222ENST00000478279 STARD5Q9NSY2 213 aa10.91□□□□□ -0.66
APTX-222ENST00000478279 RAB20Q9NX57 234 aa10.91□□□□□ -0.66
APTX-222ENST00000478279 FAM13BQ9NYF5 915 aa10.91□□□□□ -0.66
APTX-222ENST00000478279 PPM1HQ9ULR3 514 aa10.91□□□□□ -0.66
APTX-222ENST00000478279 ENTPD2Q9Y5L3 495 aa10.91□□□□□ -0.66
APTX-222ENST00000478279 USP9YO00507 2555 aaPredicted RBP10.91□□□□□ -0.66
APTX-222ENST00000478279 COL27A1Q8IZC6 1860 aaPredicted RBP10.91□□□□□ -0.66
APTX-222ENST00000478279 MYO9AB2RTY4 2548 aa10.9□□□□□ -0.66
APTX-222ENST00000478279 A0A1W2PQU0 124 aa10.9□□□□□ -0.66
APTX-222ENST00000478279 C1QTNF3-AMACRE9PGA6 284 aa10.9□□□□□ -0.66
APTX-222ENST00000478279 O00370 1275 aa10.9□□□□□ -0.66
APTX-222ENST00000478279 ALOX15BO15296 676 aa10.9□□□□□ -0.66
APTX-222ENST00000478279 EFSO43281 561 aa10.9□□□□□ -0.66
APTX-222ENST00000478279 GABBR2O75899 941 aa10.9□□□□□ -0.66
APTX-222ENST00000478279 NEBLO76041 1014 aa10.9□□□□□ -0.66
APTX-222ENST00000478279 VDRP11473 427 aa10.9□□□□□ -0.66
APTX-222ENST00000478279 PRLRP16471 622 aa10.9□□□□□ -0.66
APTX-222ENST00000478279 AKT2P31751 481 aa10.9□□□□□ -0.66
APTX-222ENST00000478279 RGS7P49802 495 aa10.9□□□□□ -0.66
APTX-222ENST00000478279 MXI1P50539 228 aa10.9□□□□□ -0.66
APTX-222ENST00000478279 TAS2R38P59533 333 aa10.9□□□□□ -0.66
APTX-222ENST00000478279 HNRNPKP61978 463 aaKnown RBP eCLIP10.9□□□□□ -0.66
APTX-222ENST00000478279 LINC00303Q3SY05 128 aa10.9□□□□□ -0.66
APTX-222ENST00000478279 C6orf132Q5T0Z8 1188 aa10.9□□□□□ -0.66
APTX-222ENST00000478279 PMF1Q6P1K2 205 aa10.9□□□□□ -0.66
APTX-222ENST00000478279 NEK5Q6P3R8 708 aa10.9□□□□□ -0.66
APTX-222ENST00000478279 RBM44Q6ZP01 1051 aaKnown RBP10.9□□□□□ -0.66
APTX-222ENST00000478279 LGI2Q8N0V4 545 aa10.9□□□□□ -0.66
APTX-222ENST00000478279 WDR36Q8NI36 951 aaKnown RBP10.9□□□□□ -0.66
APTX-222ENST00000478279 DQX1Q8TE96 717 aaKnown RBP10.9□□□□□ -0.66
APTX-222ENST00000478279 SLC35F5Q8WV83 523 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms