RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 MAPK8IP2Q13387 824 aaPredicted RBP18.15■□□□□ 0.5
PTPN7-209ENST00000477554 DAB2IPQ5VWQ8 1189 aa18.15■□□□□ 0.5
PTPN7-209ENST00000477554 DNAJC24Q6P3W2 148 aa18.15■□□□□ 0.5
PTPN7-209ENST00000477554 SND1Q7KZF4 910 aaKnown RBP eCLIP18.15■□□□□ 0.5
PTPN7-209ENST00000477554 LPCAT2Q7L5N7 544 aa18.15■□□□□ 0.5
PTPN7-209ENST00000477554 CCDC170Q8IYT3 715 aa18.15■□□□□ 0.5
PTPN7-209ENST00000477554 ARFGAP1Q8N6T3 406 aa18.15■□□□□ 0.5
PTPN7-209ENST00000477554 TRIM44Q96DX7 344 aaPredicted RBP18.15■□□□□ 0.5
PTPN7-209ENST00000477554 DEF6Q9H4E7 631 aa18.15■□□□□ 0.5
PTPN7-209ENST00000477554 ITM2CQ9NQX7 267 aa18.15■□□□□ 0.5
PTPN7-209ENST00000477554 ARHGAP20Q9P2F6 1191 aa18.15■□□□□ 0.5
PTPN7-209ENST00000477554 K7ERQ8 282 aa18.14■□□□□ 0.49
PTPN7-209ENST00000477554 PLK4O00444 970 aa18.14■□□□□ 0.49
PTPN7-209ENST00000477554 F9P00740 461 aa18.14■□□□□ 0.49
PTPN7-209ENST00000477554 ADRA1BP35368 520 aa18.14■□□□□ 0.49
PTPN7-209ENST00000477554 DEKP35659 375 aaKnown RBP18.14■□□□□ 0.49
PTPN7-209ENST00000477554 HNRNPA1L2Q32P51 320 aaKnown RBP18.14■□□□□ 0.49
PTPN7-209ENST00000477554 CYP2U1Q7Z449 544 aa18.14■□□□□ 0.49
PTPN7-209ENST00000477554 TMEM139Q8IV31 216 aa18.14■□□□□ 0.49
PTPN7-209ENST00000477554 OR7D4Q8NG98 312 aa18.14■□□□□ 0.49
PTPN7-209ENST00000477554 FRS2Q8WU20 508 aa18.14■□□□□ 0.49
PTPN7-209ENST00000477554 PTPRN2Q92932 1015 aa18.14■□□□□ 0.49
PTPN7-209ENST00000477554 CCDC42Q96M95 316 aa18.14■□□□□ 0.49
PTPN7-209ENST00000477554 HSPA12BQ96MM6 686 aa18.14■□□□□ 0.49
PTPN7-209ENST00000477554 FAM129BQ96TA1 746 aa18.14■□□□□ 0.49
PTPN7-209ENST00000477554 CHP1Q99653 195 aa18.14■□□□□ 0.49
PTPN7-209ENST00000477554 GPR174Q9BXC1 333 aa18.14■□□□□ 0.49
PTPN7-209ENST00000477554 NHEJ1Q9H9Q4 299 aaPredicted RBP18.14■□□□□ 0.49
PTPN7-209ENST00000477554 WSB2Q9NYS7 404 aaPredicted RBP18.14■□□□□ 0.49
PTPN7-209ENST00000477554 TBC1D30Q9Y2I9 924 aa18.14■□□□□ 0.49
PTPN7-209ENST00000477554 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.13■□□□□ 0.49
PTPN7-209ENST00000477554 ARHGAP6O43182 974 aa18.13■□□□□ 0.49
PTPN7-209ENST00000477554 LRP3O75074 770 aa18.13■□□□□ 0.49
PTPN7-209ENST00000477554 ACSL1P33121 698 aa18.13■□□□□ 0.49
PTPN7-209ENST00000477554 CDH4P55283 916 aa18.13■□□□□ 0.49
PTPN7-209ENST00000477554 IRX4P78413 519 aa18.13■□□□□ 0.49
PTPN7-209ENST00000477554 ZNF177Q13360 481 aaPredicted RBP18.13■□□□□ 0.49
PTPN7-209ENST00000477554 MAMLD1Q13495 774 aa18.13■□□□□ 0.49
PTPN7-209ENST00000477554 HS1BP3Q53T59 392 aa18.13■□□□□ 0.49
PTPN7-209ENST00000477554 MANEALQ5VSG8 457 aa18.13■□□□□ 0.49
PTPN7-209ENST00000477554 TTC39BQ5VTQ0 682 aaPredicted RBP18.13■□□□□ 0.49
PTPN7-209ENST00000477554 LINGO4Q6UY18 593 aa18.13■□□□□ 0.49
PTPN7-209ENST00000477554 STK40Q8N2I9 435 aa18.13■□□□□ 0.49
PTPN7-209ENST00000477554 PRCCQ92733 491 aaPredicted RBP18.13■□□□□ 0.49
PTPN7-209ENST00000477554 C1orf74Q96LT6 269 aa18.13■□□□□ 0.49
PTPN7-209ENST00000477554 HAPLN3Q96S86 360 aa18.13■□□□□ 0.49
PTPN7-209ENST00000477554 GPATCH2LQ9NWQ4 482 aa18.13■□□□□ 0.49
PTPN7-209ENST00000477554 DLL3Q9NYJ7 618 aa18.13■□□□□ 0.49
PTPN7-209ENST00000477554 PCDHGA5Q9Y5G8 931 aa18.13■□□□□ 0.49
PTPN7-209ENST00000477554 LNP1A1A4G5 178 aa18.12■□□□□ 0.49
PTPN7-209ENST00000477554 DCDC2BA2VCK2 349 aa18.12■□□□□ 0.49
PTPN7-209ENST00000477554 CLDN11O75508 207 aa18.12■□□□□ 0.49
PTPN7-209ENST00000477554 FTLP02792 175 aaPredicted RBP18.12■□□□□ 0.49
PTPN7-209ENST00000477554 CD6P30203 668 aa18.12■□□□□ 0.49
PTPN7-209ENST00000477554 CYLC1P35663 651 aaPredicted RBP18.12■□□□□ 0.49
PTPN7-209ENST00000477554 EIF4A3P38919 411 aaKnown RBP18.12■□□□□ 0.49
PTPN7-209ENST00000477554 PI4KAP42356 2102 aa18.12■□□□□ 0.49
PTPN7-209ENST00000477554 PLK1P53350 603 aa18.12■□□□□ 0.49
PTPN7-209ENST00000477554 CCZ1BP86790 482 aa18.12■□□□□ 0.49
PTPN7-209ENST00000477554 CCZ1P86791 482 aaPredicted RBP18.12■□□□□ 0.49
PTPN7-209ENST00000477554 ZNF33AQ06730 810 aa18.12■□□□□ 0.49
PTPN7-209ENST00000477554 LYSMD4Q5XG99 296 aa18.12■□□□□ 0.49
PTPN7-209ENST00000477554 MMAAQ8IVH4 418 aaKnown RBP18.12■□□□□ 0.49
PTPN7-209ENST00000477554 PEBP4Q96S96 227 aa18.12■□□□□ 0.49
PTPN7-209ENST00000477554 C6orf106Q9H6K1 298 aaPredicted RBP18.12■□□□□ 0.49
PTPN7-209ENST00000477554 OR12D3Q9UGF7 316 aa18.12■□□□□ 0.49
PTPN7-209ENST00000477554 PILRBQ9UKJ0 227 aa18.12■□□□□ 0.49
PTPN7-209ENST00000477554 SPEGQ15772 3267 aa18.11■□□□□ 0.49
PTPN7-209ENST00000477554 MID1O15344 667 aa18.11■□□□□ 0.49
PTPN7-209ENST00000477554 SMAD6O43541 496 aaKnown RBP18.11■□□□□ 0.49
PTPN7-209ENST00000477554 AKR1B10O60218 316 aa18.11■□□□□ 0.49
PTPN7-209ENST00000477554 ZNF217O75362 1048 aa18.11■□□□□ 0.49
PTPN7-209ENST00000477554 ASLP04424 464 aa18.11■□□□□ 0.49
PTPN7-209ENST00000477554 RHOCP08134 193 aa18.11■□□□□ 0.49
PTPN7-209ENST00000477554 ACVRL1P37023 503 aa18.11■□□□□ 0.49
PTPN7-209ENST00000477554 ZNF143P52747 638 aaPredicted RBP18.11■□□□□ 0.49
PTPN7-209ENST00000477554 LMNB2Q03252 620 aa18.11■□□□□ 0.49
PTPN7-209ENST00000477554 POM121L1PQ3SYA9 428 aa18.11■□□□□ 0.49
PTPN7-209ENST00000477554 AASDHQ4L235 1098 aaPredicted RBP18.11■□□□□ 0.49
PTPN7-209ENST00000477554 PLEKHA7Q6IQ23 1121 aa18.11■□□□□ 0.49
PTPN7-209ENST00000477554 STRADAQ7RTN6 431 aa18.11■□□□□ 0.49
PTPN7-209ENST00000477554 METTL3Q86U44 580 aaKnown RBP18.11■□□□□ 0.49
PTPN7-209ENST00000477554 NLRP14Q86W24 1093 aa18.11■□□□□ 0.49
PTPN7-209ENST00000477554 CCDC117Q8IWD4 279 aaPredicted RBP18.11■□□□□ 0.49
PTPN7-209ENST00000477554 OR2I1PQ8NGU4 316 aa18.11■□□□□ 0.49
PTPN7-209ENST00000477554 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.11■□□□□ 0.49
PTPN7-209ENST00000477554 MUC3BQ9H195 1237 aa18.11■□□□□ 0.49
PTPN7-209ENST00000477554 RSPH9Q9H1X1 276 aaPredicted RBP18.11■□□□□ 0.49
PTPN7-209ENST00000477554 VPS45Q9NRW7 570 aa18.11■□□□□ 0.49
PTPN7-209ENST00000477554 VPS51Q9UID3 782 aa18.11■□□□□ 0.49
PTPN7-209ENST00000477554 VPS28Q9UK41 221 aa18.11■□□□□ 0.49
PTPN7-209ENST00000477554 SARDHQ9UL12 918 aa18.11■□□□□ 0.49
PTPN7-209ENST00000477554 PCDH15Q96QU1 1955 aa18.11■□□□□ 0.49
PTPN7-209ENST00000477554 SOWAHDA6NJG2 315 aa18.1■□□□□ 0.49
PTPN7-209ENST00000477554 LRIG2O94898 1065 aa18.1■□□□□ 0.49
PTPN7-209ENST00000477554 MOCS3O95396 460 aa18.1■□□□□ 0.49
PTPN7-209ENST00000477554 IGLV3-19P01714 112 aa18.1■□□□□ 0.49
PTPN7-209ENST00000477554 SRPRAP08240 638 aaKnown RBP18.1■□□□□ 0.49
PTPN7-209ENST00000477554 C7P10643 843 aa18.1■□□□□ 0.49
PTPN7-209ENST00000477554 TCF4P15884 667 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms