RNA–Protein interactions for RNA: ENST00000477538.1

VHL-203, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best)

Gene VHL, Length 958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-203ENST00000477538 PABPC1P11940 636 aaKnown RBP16.58■□□□□ 0.24
VHL-203ENST00000477538 MZF1P28698 734 aaPredicted RBP16.58■□□□□ 0.24
VHL-203ENST00000477538 CTHP32929 405 aa16.58■□□□□ 0.24
VHL-203ENST00000477538 ACVRL1P37023 503 aa16.58■□□□□ 0.24
VHL-203ENST00000477538 NR2C2P49116 596 aa16.58■□□□□ 0.24
VHL-203ENST00000477538 OTUD4Q01804 1114 aaKnown RBP16.58■□□□□ 0.24
VHL-203ENST00000477538 GALNT2Q10471 571 aa16.58■□□□□ 0.24
VHL-203ENST00000477538 NOMO1Q15155 1222 aa16.58■□□□□ 0.24
VHL-203ENST00000477538 TJAP1Q5JTD0 557 aa16.58■□□□□ 0.24
VHL-203ENST00000477538 DNTTIP2Q5QJE6 756 aaKnown RBP16.58■□□□□ 0.24
VHL-203ENST00000477538 NAIF1Q69YI7 327 aaPredicted RBP16.58■□□□□ 0.24
VHL-203ENST00000477538 BZW1Q7L1Q6 419 aaKnown RBP16.58■□□□□ 0.24
VHL-203ENST00000477538 RALGPS2Q86X27 583 aaPredicted RBP16.58■□□□□ 0.24
VHL-203ENST00000477538 ZNF354CQ86Y25 554 aa16.58■□□□□ 0.24
VHL-203ENST00000477538 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.58■□□□□ 0.24
VHL-203ENST00000477538 TTC13Q8NBP0 860 aa16.58■□□□□ 0.24
VHL-203ENST00000477538 ACTL9Q8TC94 416 aa16.58■□□□□ 0.24
VHL-203ENST00000477538 ARHGEF2Q92974 986 aaKnown RBP16.58■□□□□ 0.24
VHL-203ENST00000477538 HMCESQ96FZ2 354 aa16.58■□□□□ 0.24
VHL-203ENST00000477538 SLC27A6Q9Y2P4 619 aa16.58■□□□□ 0.24
VHL-203ENST00000477538 RAD54BQ9Y620 910 aa16.58■□□□□ 0.24
VHL-203ENST00000477538 UNC80Q8N2C7 3258 aa16.57■□□□□ 0.24
VHL-203ENST00000477538 CKAP5Q14008 2032 aa16.57■□□□□ 0.24
VHL-203ENST00000477538 GLULP15104 373 aa16.57■□□□□ 0.24
VHL-203ENST00000477538 MX2P20592 715 aa16.57■□□□□ 0.24
VHL-203ENST00000477538 PAFAH1B1P43034 410 aa16.57■□□□□ 0.24
VHL-203ENST00000477538 NUMBP49757 651 aa16.57■□□□□ 0.24
VHL-203ENST00000477538 PAPOLAP51003 745 aaKnown RBP16.57■□□□□ 0.24
VHL-203ENST00000477538 PLK1P53350 603 aa16.57■□□□□ 0.24
VHL-203ENST00000477538 DMC1Q14565 340 aa16.57■□□□□ 0.24
VHL-203ENST00000477538 SIX1Q15475 284 aaPredicted RBP16.57■□□□□ 0.24
VHL-203ENST00000477538 PLEKHG6Q3KR16 790 aa16.57■□□□□ 0.24
VHL-203ENST00000477538 PREPLQ4J6C6 727 aaPredicted RBP16.57■□□□□ 0.24
VHL-203ENST00000477538 PITRM1Q5JRX3 1037 aa16.57■□□□□ 0.24
VHL-203ENST00000477538 IER5LQ5T953 404 aa16.57■□□□□ 0.24
VHL-203ENST00000477538 KIAA0907Q7Z7F0 614 aaPredicted RBP16.57■□□□□ 0.24
VHL-203ENST00000477538 APCDD1Q8J025 514 aa16.57■□□□□ 0.24
VHL-203ENST00000477538 AHI1Q8N157 1196 aa16.57■□□□□ 0.24
VHL-203ENST00000477538 PHTF2Q8N3S3 785 aa16.57■□□□□ 0.24
VHL-203ENST00000477538 ATPAF2Q8N5M1 289 aa16.57■□□□□ 0.24
VHL-203ENST00000477538 CCDC33Q8N5R6 958 aa16.57■□□□□ 0.24
VHL-203ENST00000477538 WFIKKN2Q8TEU8 576 aa16.57■□□□□ 0.24
VHL-203ENST00000477538 ALG14Q96F25 216 aa16.57■□□□□ 0.24
VHL-203ENST00000477538 OLFM3Q96PB7 478 aa16.57■□□□□ 0.24
VHL-203ENST00000477538 PNKPQ96T60 521 aa16.57■□□□□ 0.24
VHL-203ENST00000477538 FAM118BQ9BPY3 351 aa16.57■□□□□ 0.24
VHL-203ENST00000477538 FEM1AQ9BSK4 669 aa16.57■□□□□ 0.24
VHL-203ENST00000477538 SPON2Q9BUD6 331 aa16.57■□□□□ 0.24
VHL-203ENST00000477538 ATP13A1Q9HD20 1204 aa16.57■□□□□ 0.24
VHL-203ENST00000477538 RNF14Q9UBS8 474 aa16.57■□□□□ 0.24
VHL-203ENST00000477538 CDC23Q9UJX2 597 aa16.57■□□□□ 0.24
VHL-203ENST00000477538 VPS28Q9UK41 221 aa16.57■□□□□ 0.24
VHL-203ENST00000477538 INTS6Q9UL03 887 aaKnown RBP16.57■□□□□ 0.24
VHL-203ENST00000477538 R3HDM2Q9Y2K5 976 aaKnown RBP16.57■□□□□ 0.24
VHL-203ENST00000477538 OR51B4Q9Y5P0 310 aa16.57■□□□□ 0.24
VHL-203ENST00000477538 PPP1R12AO14974 1030 aaPredicted RBP16.56■□□□□ 0.24
VHL-203ENST00000477538 NCAM2O15394 837 aa16.56■□□□□ 0.24
VHL-203ENST00000477538 GARSP41250 739 aaKnown RBP16.56■□□□□ 0.24
VHL-203ENST00000477538 MESP2Q0VG99 397 aa16.56■□□□□ 0.24
VHL-203ENST00000477538 SERINC3Q13530 473 aa16.56■□□□□ 0.24
VHL-203ENST00000477538 TUBB2AQ13885 445 aa16.56■□□□□ 0.24
VHL-203ENST00000477538 PDK1Q15118 436 aa16.56■□□□□ 0.24
VHL-203ENST00000477538 MLF2Q15773 248 aaPredicted RBP16.56■□□□□ 0.24
VHL-203ENST00000477538 GEN1Q17RS7 908 aa16.56■□□□□ 0.24
VHL-203ENST00000477538 FUT11Q495W5 492 aa16.56■□□□□ 0.24
VHL-203ENST00000477538 SLC44A4Q53GD3 710 aa16.56■□□□□ 0.24
VHL-203ENST00000477538 IL31Q6EBC2 164 aa16.56■□□□□ 0.24
VHL-203ENST00000477538 TXNDC11Q6PKC3 985 aa16.56■□□□□ 0.24
VHL-203ENST00000477538 TPRG1Q6ZUI0 275 aa16.56■□□□□ 0.24
VHL-203ENST00000477538 TERB1Q8NA31 727 aa16.56■□□□□ 0.24
VHL-203ENST00000477538 DCAF4L2Q8NA75 395 aa16.56■□□□□ 0.24
VHL-203ENST00000477538 EXOC4Q96A65 974 aa16.56■□□□□ 0.24
VHL-203ENST00000477538 MSANTD3Q96H12 275 aa16.56■□□□□ 0.24
VHL-203ENST00000477538 NECAB3Q96P71 396 aaPredicted RBP16.56■□□□□ 0.24
VHL-203ENST00000477538 P2RY13Q9BPV8 354 aa16.56■□□□□ 0.24
VHL-203ENST00000477538 TUBB2BQ9BVA1 445 aa16.56■□□□□ 0.24
VHL-203ENST00000477538 ACE2Q9BYF1 805 aaPredicted RBP16.56■□□□□ 0.24
VHL-203ENST00000477538 CD320Q9NPF0 282 aa16.56■□□□□ 0.24
VHL-203ENST00000477538 HPCAL4Q9UM19 191 aa16.56■□□□□ 0.24
VHL-203ENST00000477538 GOLGA6L10A0A0M3HER8 536 aa16.55■□□□□ 0.24
VHL-203ENST00000477538 CBX4O00257 560 aa16.55■□□□□ 0.24
VHL-203ENST00000477538 PDE2AO00408 941 aaPredicted RBP16.55■□□□□ 0.24
VHL-203ENST00000477538 MCF2LO15068 1137 aa16.55■□□□□ 0.24
VHL-203ENST00000477538 KAT7O95251 611 aa16.55■□□□□ 0.24
VHL-203ENST00000477538 APODP05090 189 aa16.55■□□□□ 0.24
VHL-203ENST00000477538 GALK1P51570 392 aa16.55■□□□□ 0.24
VHL-203ENST00000477538 EIF3EP60228 445 aaKnown RBP16.55■□□□□ 0.24
VHL-203ENST00000477538 ARHGAP36Q6ZRI8 547 aa16.55■□□□□ 0.24
VHL-203ENST00000477538 ADIPOR2Q86V24 386 aa16.55■□□□□ 0.24
VHL-203ENST00000477538 ZC3H18Q86VM9 953 aaKnown RBP16.55■□□□□ 0.24
VHL-203ENST00000477538 LRRC49Q8IUZ0 686 aa16.55■□□□□ 0.24
VHL-203ENST00000477538 SUGP1Q8IWZ8 645 aaKnown RBP16.55■□□□□ 0.24
VHL-203ENST00000477538 UBALD2Q8IYN6 164 aa16.55■□□□□ 0.24
VHL-203ENST00000477538 C1orf54Q8WWF1 131 aa16.55■□□□□ 0.24
VHL-203ENST00000477538 ATG4AQ8WYN0 398 aa16.55■□□□□ 0.24
VHL-203ENST00000477538 HDAC11Q96DB2 347 aa16.55■□□□□ 0.24
VHL-203ENST00000477538 C2orf49Q9BVC5 232 aaPredicted RBP16.55■□□□□ 0.24
VHL-203ENST00000477538 AP1M1Q9BXS5 423 aa16.55■□□□□ 0.24
VHL-203ENST00000477538 FRMD8P1Q9BZ68 369 aaPredicted RBP16.55■□□□□ 0.24
VHL-203ENST00000477538 SP110Q9HB58 689 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms